4-159052025-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052025
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052025
    reference: chr 4
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1289C>A
  hgvsp: ENSP00000377396.4:p.Pro430Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1265C>A
  hgvsp: ENSP00000296530.7:p.Pro422Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.167C>A
  hgvsp: ENSP00000465491.1:p.Pro56Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.511C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1265C>A
  hgvsp: ENSP00000465976.1:p.Pro422Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.383C>A
  hgvsp: ENSP00000466811.1:p.Pro128Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.487C>A
  hgvsp: ENSP00000468648.1:p.Pro163Gln
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro430Gln
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

4-159052025-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052025
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052025
    reference: chr 4
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1265C>T
  hgvsp: ENSP00000296530.7:p.Pro422Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1265C>T
  hgvsp: ENSP00000465976.1:p.Pro422Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.511C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.383C>T
  hgvsp: ENSP00000466811.1:p.Pro128Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.487C>T
  hgvsp: ENSP00000468648.1:p.Pro163Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1289C>T
  hgvsp: ENSP00000377396.4:p.Pro430Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.167C>T
  hgvsp: ENSP00000465491.1:p.Pro56Leu
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52482
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro430Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

4-159052033-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052033
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052033
    reference: chr 4
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1257G>A
  hgvsp: ENST00000585682.1:c.1257G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.159G>A
  hgvsp: ENST00000592586.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1257G>A
  hgvsp: ENST00000296530.8:c.1257G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1281G>A
  hgvsp: ENST00000393807.5:c.1281G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.479G>A
  hgvsp: ENST00000593260.1:c.479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.503G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.375G>A
  hgvsp: ENST00000590648.1:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52449
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys427Lys
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

4-159052037-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052037
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052037
    reference: chr 4
allele count: 6
allele frequency: 4.949025042066713e-5
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.371G>A
  hgvsp: ENSP00000466811.1:p.Arg124Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.475G>A
  hgvsp: ENSP00000468648.1:p.Arg159Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1253G>A
  hgvsp: ENSP00000296530.7:p.Arg418Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1253G>A
  hgvsp: ENSP00000465976.1:p.Arg418Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1277G>A
  hgvsp: ENSP00000377396.4:p.Arg426Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.155G>A
  hgvsp: ENSP00000465491.1:p.Arg52Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.499G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3372
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 52437
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg426Gln
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

4-159052038-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052038
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052038
    reference: chr 4
allele count: 7
allele frequency: 5.774148313123814e-5
allele num: 121230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.154C>T
  hgvsp: ENSP00000465491.1:p.Arg52Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1252C>T
  hgvsp: ENSP00000465976.1:p.Arg418Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1276C>T
  hgvsp: ENSP00000377396.4:p.Arg426Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.498C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.474C>T
  hgvsp: ENSP00000468648.1:p.Arg159Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1252C>T
  hgvsp: ENSP00000296530.7:p.Arg418Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.370C>T
  hgvsp: ENSP00000466811.1:p.Arg124Ter
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg426Ter
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-159052039-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052039
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052039
    reference: chr 4
allele count: 6
allele frequency: 4.949351634935823e-5
allele num: 121228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1251G>T
  hgvsp: ENSP00000465976.1:p.Gln417His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.473G>T
  hgvsp: ENSP00000468648.1:p.Gln158His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1251G>T
  hgvsp: ENSP00000296530.7:p.Gln417His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.153G>T
  hgvsp: ENSP00000465491.1:p.Gln51His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1275G>T
  hgvsp: ENSP00000377396.4:p.Gln425His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.497G>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.369G>T
  hgvsp: ENSP00000466811.1:p.Gln123His
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln425His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS

4-159052051-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052051
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052051
    reference: chr 4
allele count: 2
allele frequency: 1.649702228747711e-5
allele num: 121234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.485A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.141A>C
  hgvsp: ENST00000592586.1:c.141A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.461A>C
  hgvsp: ENST00000593260.1:c.461A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1239A>C
  hgvsp: ENST00000296530.8:c.1239A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1263A>C
  hgvsp: ENST00000393807.5:c.1263A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1239A>C
  hgvsp: ENST00000585682.1:c.1239A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.357A>C
  hgvsp: ENST00000590648.1:c.357A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52412
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala421Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

4-159052055-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052055
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052055
    reference: chr 4
allele count: 9
allele frequency: 7.424394911814687e-5
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1259T>A
  hgvsp: ENSP00000377396.4:p.Leu420Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.457T>A
  hgvsp: ENSP00000468648.1:p.Leu153Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.137T>A
  hgvsp: ENSP00000465491.1:p.Leu46Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.353T>A
  hgvsp: ENSP00000466811.1:p.Leu118Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1235T>A
  hgvsp: ENSP00000296530.7:p.Leu412Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1235T>A
  hgvsp: ENSP00000465976.1:p.Leu412Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.481T>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu420Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

4-159052059-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052059
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052059
    reference: chr 4
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.453G>A
  hgvsp: ENSP00000468648.1:p.Ala152Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.477G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1255G>A
  hgvsp: ENSP00000377396.4:p.Ala419Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1231G>A
  hgvsp: ENSP00000465976.1:p.Ala411Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1231G>A
  hgvsp: ENSP00000296530.7:p.Ala411Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.349G>A
  hgvsp: ENSP00000466811.1:p.Ala117Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.133G>A
  hgvsp: ENSP00000465491.1:p.Ala45Thr
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52379
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala419Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

4-159052060-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052060
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052060
    reference: chr 4
allele count: 9
allele frequency: 7.4236600293647e-5
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.132G>A
  hgvsp: ENST00000592586.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.476G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1254G>A
  hgvsp: ENST00000393807.5:c.1254G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1230G>A
  hgvsp: ENST00000585682.1:c.1230G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1230G>A
  hgvsp: ENST00000296530.8:c.1230G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.348G>A
  hgvsp: ENST00000590648.1:c.348G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.452G>A
  hgvsp: ENST00000593260.1:c.452G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala418Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

4-159052061-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052061
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052061
    reference: chr 4
allele count: 18
allele frequency: 1.484927980992922e-4
allele num: 121218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.131C>T
  hgvsp: ENSP00000465491.1:p.Ala44Val
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1229C>T
  hgvsp: ENSP00000465976.1:p.Ala410Val
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1253C>T
  hgvsp: ENSP00000377396.4:p.Ala418Val
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1229C>T
  hgvsp: ENSP00000296530.7:p.Ala410Val
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.475C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.451C>T
  hgvsp: ENSP00000468648.1:p.Ala151Val
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.347C>T
  hgvsp: ENSP00000466811.1:p.Ala116Val
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52283
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala418Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

4-159052074-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052074
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052074
    reference: chr 4
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1240G>C
  hgvsp: ENSP00000377396.4:p.Asp414His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1216G>C
  hgvsp: ENSP00000465976.1:p.Asp406His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.118G>C
  hgvsp: ENSP00000465491.1:p.Asp40His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.462G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.334G>C
  hgvsp: ENSP00000466811.1:p.Asp112His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1216G>C
  hgvsp: ENSP00000296530.7:p.Asp406His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.438G>C
  hgvsp: ENSP00000468648.1:p.Asp147His
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52363
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp414His
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-159052077-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052077
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052077
    reference: chr 4
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.331G>T
  hgvsp: ENSP00000466811.1:p.Asp111Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.459G>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1213G>T
  hgvsp: ENSP00000465976.1:p.Asp405Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1237G>T
  hgvsp: ENSP00000377396.4:p.Asp413Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1213G>T
  hgvsp: ENSP00000296530.7:p.Asp405Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.115G>T
  hgvsp: ENSP00000465491.1:p.Asp39Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.435G>T
  hgvsp: ENSP00000468648.1:p.Asp146Tyr
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp413Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

4-159052079-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052079
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052079
    reference: chr 4
allele count: 3
allele frequency: 2.474390062849507e-5
allele num: 121242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.329G>A
  hgvsp: ENSP00000466811.1:p.Cys110Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.433G>A
  hgvsp: ENSP00000468648.1:p.Cys145Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1211G>A
  hgvsp: ENSP00000296530.7:p.Cys404Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1211G>A
  hgvsp: ENSP00000465976.1:p.Cys404Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.113G>A
  hgvsp: ENSP00000465491.1:p.Cys38Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1235G>A
  hgvsp: ENSP00000377396.4:p.Cys412Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.457G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42085
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys412Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

4-159052081-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052081
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052081
    reference: chr 4
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.431A>C
  hgvsp: ENSP00000468648.1:p.Lys144Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1209A>C
  hgvsp: ENSP00000465976.1:p.Lys403Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1209A>C
  hgvsp: ENSP00000296530.7:p.Lys403Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.327A>C
  hgvsp: ENSP00000466811.1:p.Lys109Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.111A>C
  hgvsp: ENSP00000465491.1:p.Lys37Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.455A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1233A>C
  hgvsp: ENSP00000377396.4:p.Lys411Asn
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys411Asn
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-159052091-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052091
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052091
    reference: chr 4
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.101T>C
  hgvsp: ENSP00000465491.1:p.Leu34Ser
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1199T>C
  hgvsp: ENSP00000465976.1:p.Leu400Ser
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.317T>C
  hgvsp: ENSP00000466811.1:p.Leu106Ser
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1199T>C
  hgvsp: ENSP00000296530.7:p.Leu400Ser
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.421T>C
  hgvsp: ENSP00000468648.1:p.Leu141Ser
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.445T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1223T>C
  hgvsp: ENSP00000377396.4:p.Leu408Ser
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52428
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu408Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/4-159052104-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052104
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052104
    reference: chr 4
allele count: 9
allele frequency: 7.427213309566251e-5
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.408G>T
  hgvsp: ENSP00000468648.1:p.Val137Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1186G>T
  hgvsp: ENSP00000296530.7:p.Val396Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1186G>T
  hgvsp: ENSP00000465976.1:p.Val396Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1210G>T
  hgvsp: ENSP00000377396.4:p.Val404Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.432G>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.88G>T
  hgvsp: ENSP00000465491.1:p.Val30Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.304G>T
  hgvsp: ENSP00000466811.1:p.Val102Leu
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val404Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

4-159052110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052110
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052110
    reference: chr 4
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1180G>A
  hgvsp: ENSP00000296530.7:p.Ala394Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.402G>A
  hgvsp: ENSP00000468648.1:p.Ala135Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.82G>A
  hgvsp: ENSP00000465491.1:p.Ala28Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.426G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1204G>A
  hgvsp: ENSP00000377396.4:p.Ala402Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.298G>A
  hgvsp: ENSP00000466811.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1180G>A
  hgvsp: ENSP00000465976.1:p.Ala394Thr
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3394
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala402Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

4-159052111-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052111
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052111
    reference: chr 4
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.401T>C
  hgvsp: ENST00000593260.1:c.401T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1203T>C
  hgvsp: ENST00000393807.5:c.1203T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1179T>C
  hgvsp: ENST00000585682.1:c.1179T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.425T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1179T>C
  hgvsp: ENST00000296530.8:c.1179T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.81T>C
  hgvsp: ENST00000592586.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.297T>C
  hgvsp: ENST00000590648.1:c.297T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3396
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp401Asp
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/4-159052121-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052121
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052121
    reference: chr 4
allele count: 8
allele frequency: 6.612553933643021e-5
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1169G>T
  hgvsp: ENSP00000465976.1:p.Arg390Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.391G>T
  hgvsp: ENSP00000468648.1:p.Arg131Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.71G>T
  hgvsp: ENSP00000465491.1:p.Arg24Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1169G>T
  hgvsp: ENSP00000296530.7:p.Arg390Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.415G>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.287G>T
  hgvsp: ENSP00000466811.1:p.Arg96Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1193G>T
  hgvsp: ENSP00000377396.4:p.Arg398Leu
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg398Leu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

4-159052121-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052121
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052121
    reference: chr 4
allele count: 2
allele frequency: 1.653138483410755e-5
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1169G>A
  hgvsp: ENSP00000465976.1:p.Arg390His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1193G>A
  hgvsp: ENSP00000377396.4:p.Arg398His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.391G>A
  hgvsp: ENSP00000468648.1:p.Arg131His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.287G>A
  hgvsp: ENSP00000466811.1:p.Arg96His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1169G>A
  hgvsp: ENSP00000296530.7:p.Arg390His
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.415G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.71G>A
  hgvsp: ENSP00000465491.1:p.Arg24His
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52197
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg398His
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-159052121-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052121
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052121
    reference: chr 4
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1169G>C
  hgvsp: ENSP00000465976.1:p.Arg390Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.391G>C
  hgvsp: ENSP00000468648.1:p.Arg131Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1193G>C
  hgvsp: ENSP00000377396.4:p.Arg398Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.287G>C
  hgvsp: ENSP00000466811.1:p.Arg96Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.415G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1169G>C
  hgvsp: ENSP00000296530.7:p.Arg390Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.71G>C
  hgvsp: ENSP00000465491.1:p.Arg24Pro
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41708
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg398Pro
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

4-159052122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052122
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052122
    reference: chr 4
allele count: 15
allele frequency: 1.239976853765396e-4
allele num: 120970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.414C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.286C>T
  hgvsp: ENSP00000466811.1:p.Arg96Cys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1168C>T
  hgvsp: ENSP00000296530.7:p.Arg390Cys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1168C>T
  hgvsp: ENSP00000465976.1:p.Arg390Cys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1192C>T
  hgvsp: ENSP00000377396.4:p.Arg398Cys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.390C>T
  hgvsp: ENSP00000468648.1:p.Arg131Cys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.70C>T
  hgvsp: ENSP00000465491.1:p.Arg24Cys
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12731
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg398Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

4-159052123-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052123
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052122
    reference: chr 4
allele count: 1
allele frequency: 8.266785708380868e-6
allele num: 120966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.388delC
  hgvsp: ENSP00000468648.1:p.Pro130LeufsTer12
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1166delC
  hgvsp: ENSP00000296530.7:p.Pro389LeufsTer12
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.284delC
  hgvsp: ENSP00000466811.1:p.Pro95LeufsTer12
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1166delC
  hgvsp: ENSP00000465976.1:p.Pro389LeufsTer12
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1190delC
  hgvsp: ENSP00000377396.4:p.Pro397LeufsTer12
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.68delC
  hgvsp: ENSP00000465491.1:p.Pro23LeufsTer12
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.412delC
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro397LeufsTer12
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: AG
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

4-159052136-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052136
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052136
    reference: chr 4
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1154G>A
  hgvsp: ENSP00000296530.7:p.Cys385Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.376G>A
  hgvsp: ENSP00000468648.1:p.Cys126Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.272G>A
  hgvsp: ENSP00000466811.1:p.Cys91Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.56G>A
  hgvsp: ENSP00000465491.1:p.Cys19Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1178G>A
  hgvsp: ENSP00000377396.4:p.Cys393Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1154G>A
  hgvsp: ENSP00000465976.1:p.Cys385Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.400G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys393Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

4-159052141-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052141
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052143
    reference: chr 4
allele count: 1
allele frequency: 8.33694600993764e-6
allele num: 119948
alternate allele: ATT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.49_50dupAA
  hgvsp: ENSP00000465491.1:p.Asn17LysfsTer19
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1147_1148dupAA
  hgvsp: ENSP00000465976.1:p.Asn383LysfsTer19
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1171_1172dupAA
  hgvsp: ENSP00000377396.4:p.Asn391LysfsTer19
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.265_266dupAA
  hgvsp: ENSP00000466811.1:p.Asn89LysfsTer19
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1147_1148dupAA
  hgvsp: ENSP00000296530.7:p.Asn383LysfsTer19
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.393_394dupAA
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.369_370dupAA
  hgvsp: ENSP00000468648.1:p.Asn124LysfsTer19
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3288
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn391LysfsTer19
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/4-159052170-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052170
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052170
    reference: chr 4
allele count: 1
allele frequency: 9.095043201455207e-6
allele num: 109950
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-6T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-6T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-6T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-6T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-6T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-6T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-6T>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12293
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1150-6T>G
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

4-159052171-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052171
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052171
    reference: chr 4
allele count: 1
allele frequency: 9.096366911055724e-6
allele num: 109934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-7T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-7T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-7T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-7T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-7T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-7T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-7T>C
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 9.75e1
  variant carriers: 1
hgvs: c.1150-7T>C
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

4-159052181-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052181
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052181
    reference: chr 4
allele count: 3
allele frequency: 2.853501246028878e-5
allele num: 105134
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-17G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-17G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-17G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-17G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-17G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-17G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-17G>C
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19130
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

4-159052193-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052193
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052193
    reference: chr 4
allele count: 2
allele frequency: 2.003967856355584e-5
allele num: 99802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-29A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-29A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-29A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-29A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-29A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-29A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-29A>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24556
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5437
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22692
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

4-159052194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052194
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052194
    reference: chr 4
allele count: 1
allele frequency: 1.009081735620585e-5
allele num: 99100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-30C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-30C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-30C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-30C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-30C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-30C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-30C>T
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24680
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5510
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ

4-159052195-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052195
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052195
    reference: chr 4
allele count: 9
allele frequency: 9.152852639072511e-5
allele num: 98330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-31G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-31G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-31G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-31G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-31G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-31G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-31G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7926
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5621
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3699
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

4-159052201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052201
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052201
    reference: chr 4
allele count: 3
allele frequency: 3.171381453761258e-5
allele num: 94596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-37C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-37C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-37C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-37C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-37C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-37C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-37C>T
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10444
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24388
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21524
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/4-159052204-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052204
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052204
    reference: chr 4
allele count: 1
allele frequency: 1.070090957731407e-5
allele num: 93450
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-40T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-40T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-40T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-40T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-40T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-40T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-40T>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2399
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6023
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5083
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20763
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/4-159052209-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052209
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052209
    reference: chr 4
allele count: 1
allele frequency: 1.13509954823038e-5
allele num: 88098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-45T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-45T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-45T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-45T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-45T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-45T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-45T>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11861
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21736
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3610
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17599
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD

4-159052213-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159052213
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159052213
    reference: chr 4
allele count: 5
allele frequency: 5.900540489508839e-5
allele num: 84738
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1126-49A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.348-49A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1126-49A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.28-49A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.244-49A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.372-49A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1150-49A>C
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11655
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20912
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5619
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3672
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

4-159076713-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076713
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076713
    reference: chr 4
allele count: 1
allele frequency: 9.026085386767758e-6
allele num: 110790
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+50A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+50A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+50A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+50A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+50A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+50A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+50A>C
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13775
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5265
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3035
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

4-159076717-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076717
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076717
    reference: chr 4
allele count: 1
allele frequency: 9.012256669069936e-6
allele num: 110960
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+46A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+46A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+46A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+46A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+46A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+46A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+46A>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14187
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4763
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6689
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3794
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5269
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5831
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

4-159076721-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076721
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076721
    reference: chr 4
allele count: 7
allele frequency: 6.328312871788382e-5
allele num: 110614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+42G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+42G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+42G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+42G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+42G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+42G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+42G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10683
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17120
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13238
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6444
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2925
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3076
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4339
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

4-159076722-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076722
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076722
    reference: chr 4
allele count: 2
allele frequency: 1.801477211313277e-5
allele num: 111020
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+41C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+41C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+41C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+41C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+41C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+41C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+41C>T
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8731
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19289
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5798
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5025
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5299
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3323
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

4-159076722-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076722
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076722
    reference: chr 4
allele count: 1
allele frequency: 9.007386056566384e-6
allele num: 111020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+41C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+41C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+41C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+41C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+41C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+41C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+41C>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8731
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5496
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5025
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5798
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-159076723-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076723
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076723
    reference: chr 4
allele count: 1
allele frequency: 8.976177225643142e-6
allele num: 111406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+40G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+40G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+40G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+40G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+40G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+40G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+40G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7335
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5340
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5271
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5318
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS

4-159076727-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076727
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076727
    reference: chr 4
allele count: 1
allele frequency: 8.915039671926539e-6
allele num: 112170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+36A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+36A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+36A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+36A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+36A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+36A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+36A>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23505
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4743
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4337
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-159076733-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076733
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076733
    reference: chr 4
allele count: 2
allele frequency: 1.760315448528376e-5
allele num: 113616
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+30T>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+30T>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+30T>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+30T>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+30T>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+30T>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+30T>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31549
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28600
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3981
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6025
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

4-159076737-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076737
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076737
    reference: chr 4
allele count: 1
allele frequency: 8.719460091031163e-6
allele num: 114686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+26G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+26G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+26G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+26G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+26G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+26G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+26G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3390
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-159076745-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076745
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076745
    reference: chr 4
allele count: 3
allele frequency: 2.563795785119729e-5
allele num: 117014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+18A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+18A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+18A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+18A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+18A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+18A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+18A>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33790
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

4-159076753-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076753
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076753
    reference: chr 4
allele count: 1
allele frequency: 8.416374899003501e-6
allele num: 118816
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+10T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+10T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+10T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+10T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+10T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+10T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+10T>C
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3342
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35092
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

4-159076759-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076759
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076759
    reference: chr 4
allele count: 1
allele frequency: 8.359945827551038e-6
allele num: 119618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+4A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+4A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+4A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+4A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+4A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+4A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+4A>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2530
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3446
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1149+4A>G
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

4-159076760-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076760
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076760
    reference: chr 4
allele count: 1
allele frequency: 8.350730688935283e-6
allele num: 119750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.243+3A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1149+3A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1125+3A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.347+3A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.27+3A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.371+3A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1125+3A>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1149+3A>G
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

4-159076768-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076768
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076768
    reference: chr 4
allele count: 1
allele frequency: 8.30357884248111e-6
allele num: 120430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.238T>A
  hgvsp: ENSP00000466811.1:p.Leu80Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1144T>A
  hgvsp: ENSP00000377396.4:p.Leu382Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.22T>A
  hgvsp: ENSP00000465491.1:p.Leu8Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1120T>A
  hgvsp: ENSP00000465976.1:p.Leu374Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.342T>A
  hgvsp: ENSP00000468648.1:p.Leu115Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.366T>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1120T>A
  hgvsp: ENSP00000296530.7:p.Leu374Ile
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2533
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3578
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu382Ile
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-159076769-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076769
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076770
    reference: chr 4
allele count: 65
allele frequency: 5.395623734103663e-4
allele num: 120468
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.20dupT
  hgvsp: ENSP00000465491.1:p.Leu7PhefsTer6
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1118dupT
  hgvsp: ENSP00000465976.1:p.Leu373PhefsTer6
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.364dupT
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1142dupT
  hgvsp: ENSP00000377396.4:p.Leu381PhefsTer6
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1118dupT
  hgvsp: ENSP00000296530.7:p.Leu373PhefsTer6
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.340dupT
  hgvsp: ENSP00000468648.1:p.Leu114PhefsTer6
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.236dupT
  hgvsp: ENSP00000466811.1:p.Leu79PhefsTer6
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7394
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu381PhefsTer6
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

4-159076783-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076783
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076783
    reference: chr 4
allele count: 1
allele frequency: 8.271572260455268e-6
allele num: 120896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1105C>T
  hgvsp: ENSP00000465976.1:p.Leu369Phe
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.327C>T
  hgvsp: ENSP00000468648.1:p.Leu110Phe
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.7C>T
  hgvsp: ENSP00000465491.1:p.Leu3Phe
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.223C>T
  hgvsp: ENSP00000466811.1:p.Leu75Phe
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1105C>T
  hgvsp: ENSP00000296530.7:p.Leu369Phe
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.351C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1129C>T
  hgvsp: ENSP00000377396.4:p.Leu377Phe
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu377Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

4-159076806-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076806
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076806
    reference: chr 4
allele count: 17
allele frequency: 1.40338132347114e-4
allele num: 121136
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1106A>G
  hgvsp: ENSP00000377396.4:p.His369Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1082A>G
  hgvsp: ENSP00000296530.7:p.His361Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1082A>G
  hgvsp: ENSP00000465976.1:p.His361Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.328A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.200A>G
  hgvsp: ENSP00000466811.1:p.His67Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.304A>G
  hgvsp: ENSP00000468648.1:p.His102Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-17A>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3699
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His369Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-159076809-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076809
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076809
    reference: chr 4
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1103A>C
  hgvsp: ENSP00000377396.4:p.His368Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.197A>C
  hgvsp: ENSP00000466811.1:p.His66Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1079A>C
  hgvsp: ENSP00000465976.1:p.His360Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.325A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1079A>C
  hgvsp: ENSP00000296530.7:p.His360Pro
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-20A>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.301A>C
  hgvsp: ENSP00000468648.1:p.His101Pro
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7528
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5778
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His368Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

4-159076818-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076818
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076818
    reference: chr 4
allele count: 2
allele frequency: 1.650437365901964e-5
allele num: 121180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.292C>T
  hgvsp: ENSP00000468648.1:p.Thr98Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1094C>T
  hgvsp: ENSP00000377396.4:p.Thr365Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.188C>T
  hgvsp: ENSP00000466811.1:p.Thr63Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1070C>T
  hgvsp: ENSP00000465976.1:p.Thr357Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1070C>T
  hgvsp: ENSP00000296530.7:p.Thr357Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.316C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35664
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr365Ile
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

4-159076819-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076819
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076819
    reference: chr 4
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.187A>G
  hgvsp: ENSP00000466811.1:p.Thr63Ala
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1069A>G
  hgvsp: ENSP00000465976.1:p.Thr357Ala
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.315A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1069A>G
  hgvsp: ENSP00000296530.7:p.Thr357Ala
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-30A>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1093A>G
  hgvsp: ENSP00000377396.4:p.Thr365Ala
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.291A>G
  hgvsp: ENSP00000468648.1:p.Thr98Ala
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5791
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2664
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35658
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3709
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr365Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

4-159076826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076826
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076826
    reference: chr 4
allele count: 100895
allele frequency: 8.315887511538969e-1
allele num: 121328
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1086G>A
  hgvsp: ENST00000393807.5:c.1086G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-37G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1062G>A
  hgvsp: ENST00000585682.1:c.1062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1062G>A
  hgvsp: ENST00000296530.8:c.1062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.180G>A
  hgvsp: ENST00000590648.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.308G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.284G>A
  hgvsp: ENST00000593260.1:c.284G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 3.25e1
  variant carriers: 380
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 5.75e1
  variant carriers: 3436
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 8.25e1
  variant carriers: 4392
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 669
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 4.25e1
  variant carriers: 1294
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.75e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 8.75e1
  variant carriers: 3889
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 5.25e1
  variant carriers: 2748
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 2.25e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 17430
  bin: 9.75e1
  variant carriers: 17427
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 6.75e1
  variant carriers: 4643
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 7.25e1
  variant carriers: 4809
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.75e1
  variant carriers: 2092
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 6.25e1
  variant carriers: 4158
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 7.75e1
  variant carriers: 4660
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 9.25e1
  variant carriers: 3371
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 6.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 9.25e1
  variant carriers: 113
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 6.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 57971
  bin: 9.75e1
  variant carriers: 57837
hgvs: p.Ser362Ser
num of homozygotes: 42522
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

4-159076827-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076827
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076827
    reference: chr 4
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1061C>G
  hgvsp: ENSP00000296530.7:p.Ser354Trp
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.283C>G
  hgvsp: ENSP00000468648.1:p.Ser95Trp
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1085C>G
  hgvsp: ENSP00000377396.4:p.Ser362Trp
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-38C>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.179C>G
  hgvsp: ENSP00000466811.1:p.Ser60Trp
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1061C>G
  hgvsp: ENSP00000465976.1:p.Ser354Trp
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.307C>G
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42524
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser362Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

4-159076845-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076845
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076845
    reference: chr 4
allele count: 4
allele frequency: 3.298098646130506e-5
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-56G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.265G>A
  hgvsp: ENSP00000468648.1:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1067G>A
  hgvsp: ENSP00000377396.4:p.Arg356Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1043G>A
  hgvsp: ENSP00000465976.1:p.Arg348Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.161G>A
  hgvsp: ENSP00000466811.1:p.Arg54Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1043G>A
  hgvsp: ENSP00000296530.7:p.Arg348Gln
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.289G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42553
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg356Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

4-159076850-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076850
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076850
    reference: chr 4
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1062T>C
  hgvsp: ENST00000393807.5:c.1062T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.284T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-61T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.260T>C
  hgvsp: ENST00000593260.1:c.260T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.156T>C
  hgvsp: ENST00000590648.1:c.156T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1038T>C
  hgvsp: ENST00000296530.8:c.1038T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1038T>C
  hgvsp: ENST00000585682.1:c.1038T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2161
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn354Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-159076858-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076858
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076858
    reference: chr 4
allele count: 5
allele frequency: 4.122963256151461e-5
allele num: 121272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1030T>C
  hgvsp: ENSP00000465976.1:p.Trp344Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-69T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.276T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1054T>C
  hgvsp: ENSP00000377396.4:p.Trp352Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.148T>C
  hgvsp: ENSP00000466811.1:p.Trp50Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1030T>C
  hgvsp: ENSP00000296530.7:p.Trp344Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.252T>C
  hgvsp: ENSP00000468648.1:p.Trp85Arg
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8756
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Trp352Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

4-159076882-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076882
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076882
    reference: chr 4
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.228C>T
  hgvsp: ENSP00000468648.1:p.Gln77Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1006C>T
  hgvsp: ENSP00000465976.1:p.Gln336Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-93C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.252C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1030C>T
  hgvsp: ENSP00000377396.4:p.Gln344Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1006C>T
  hgvsp: ENSP00000296530.7:p.Gln336Ter
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.124C>T
  hgvsp: ENSP00000466811.1:p.Gln42Ter
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42649
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln344Ter
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-159076887-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076887
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076887
    reference: chr 4
allele count: 1
allele frequency: 8.248783304462591e-6
allele num: 121230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.223C>T
  hgvsp: ENSP00000468648.1:p.Thr75Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.247C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.119C>T
  hgvsp: ENSP00000466811.1:p.Thr40Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1001C>T
  hgvsp: ENSP00000465976.1:p.Thr334Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-98C>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1001C>T
  hgvsp: ENSP00000296530.7:p.Thr334Ile
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1025C>T
  hgvsp: ENSP00000377396.4:p.Thr342Ile
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2804
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr342Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

4-159076887-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076887
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076887
    reference: chr 4
allele count: 1
allele frequency: 8.248783304462591e-6
allele num: 121230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.1001C>A
  hgvsp: ENSP00000296530.7:p.Thr334Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1025C>A
  hgvsp: ENSP00000377396.4:p.Thr342Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.247C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.223C>A
  hgvsp: ENSP00000468648.1:p.Thr75Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-98C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.119C>A
  hgvsp: ENSP00000466811.1:p.Thr40Asn
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.1001C>A
  hgvsp: ENSP00000465976.1:p.Thr334Asn
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42644
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr342Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-159076890-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076890
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076890
    reference: chr 4
allele count: 3
allele frequency: 2.474675817467912e-5
allele num: 121228
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.998G>C
  hgvsp: ENSP00000465976.1:p.Gly333Ala
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1022G>C
  hgvsp: ENSP00000377396.4:p.Gly341Ala
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-101G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.998G>C
  hgvsp: ENSP00000296530.7:p.Gly333Ala
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.116G>C
  hgvsp: ENSP00000466811.1:p.Gly39Ala
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.244G>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.220G>C
  hgvsp: ENSP00000468648.1:p.Gly74Ala
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly341Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

4-159076890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076890
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076890
    reference: chr 4
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.244G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.998G>A
  hgvsp: ENSP00000465976.1:p.Gly333Glu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1022G>A
  hgvsp: ENSP00000377396.4:p.Gly341Glu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.220G>A
  hgvsp: ENSP00000468648.1:p.Gly74Glu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.998G>A
  hgvsp: ENSP00000296530.7:p.Gly333Glu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-101G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.116G>A
  hgvsp: ENSP00000466811.1:p.Gly39Glu
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly341Glu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

4-159076891-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076891
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076891
    reference: chr 4
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.997G>A
  hgvsp: ENSP00000465976.1:p.Gly333Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1021G>A
  hgvsp: ENSP00000377396.4:p.Gly341Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-102G>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.997G>A
  hgvsp: ENSP00000296530.7:p.Gly333Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.115G>A
  hgvsp: ENSP00000466811.1:p.Gly39Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.219G>A
  hgvsp: ENSP00000468648.1:p.Gly74Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.243G>A
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42653
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly341Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

4-159076894-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076894
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076894
    reference: chr 4
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.112T>C
  hgvsp: ENSP00000466811.1:p.Trp38Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.994T>C
  hgvsp: ENSP00000296530.7:p.Trp332Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-105T>C
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.216T>C
  hgvsp: ENSP00000468648.1:p.Trp73Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1018T>C
  hgvsp: ENSP00000377396.4:p.Trp340Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.994T>C
  hgvsp: ENSP00000465976.1:p.Trp332Arg
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.240T>C
  variant of: http://identifiers.org/hgnc/25312
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2795
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Trp340Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/4-159076910-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076910
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076910
    reference: chr 4
allele count: 6
allele frequency: 4.951230380749617e-5
allele num: 121182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.978T>G
  hgvsp: ENST00000296530.8:c.978T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.978T>G
  hgvsp: ENST00000585682.1:c.978T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.96T>G
  hgvsp: ENST00000590648.1:c.96T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-121T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.200T>G
  hgvsp: ENST00000593260.1:c.200T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.224T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1012-10T>G
  variant of: http://identifiers.org/hgnc/25312
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42723
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser67Ser
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

4-159076911-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076911
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076911
    reference: chr 4
allele count: 2
allele frequency: 1.650573574317075e-5
allele num: 121170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-122C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.223C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.977C>A
  hgvsp: ENSP00000296530.7:p.Ser326Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.95C>A
  hgvsp: ENSP00000466811.1:p.Ser32Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1012-11C>A
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.977C>A
  hgvsp: ENSP00000465976.1:p.Ser326Tyr
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.199C>A
  hgvsp: ENSP00000468648.1:p.Ser67Tyr
  variant of: http://identifiers.org/hgnc/25312
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser67Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

4-159076914-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076914
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076914
    reference: chr 4
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.196A>T
  hgvsp: ENSP00000468648.1:p.His66Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.92A>T
  hgvsp: ENSP00000466811.1:p.His31Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-125A>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.220A>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.974A>T
  hgvsp: ENSP00000296530.7:p.His325Leu
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1012-14A>T
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.974A>T
  hgvsp: ENSP00000465976.1:p.His325Leu
  variant of: http://identifiers.org/hgnc/25312
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His66Leu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

http://identifiers.org/exac.variant/4-159076922-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 159076922
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 159076922
    reference: chr 4
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000468648
  ensembl transcript: ENST00000593260
  gene symbol: FAM198B
  hgvsc: ENST00000593260.1:c.188T>G
  hgvsp: ENSP00000468648.1:p.Asn63Lys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465491
  ensembl transcript: ENST00000592586
  gene symbol: FAM198B
  hgvsc: ENST00000592586.1:c.-133T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000465976
  ensembl transcript: ENST00000585682
  gene symbol: FAM198B
  hgvsc: ENST00000585682.1:c.966T>G
  hgvsp: ENSP00000465976.1:p.Asn322Lys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000296530
  ensembl transcript: ENST00000296530
  gene symbol: FAM198B
  hgvsc: ENST00000296530.8:c.966T>G
  hgvsp: ENSP00000296530.7:p.Asn322Lys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164125
  ensembl transcript: ENST00000589306
  gene symbol: FAM198B
  hgvsc: ENST00000589306.1:n.212T>G
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000466811
  ensembl transcript: ENST00000590648
  gene symbol: FAM198B
  hgvsc: ENST00000590648.1:c.84T>G
  hgvsp: ENSP00000466811.1:p.Asn28Lys
  variant of: http://identifiers.org/hgnc/25312
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164125
  ensembl protein: ENSP00000377396
  ensembl transcript: ENST00000393807
  gene symbol: FAM198B
  hgvsc: ENST00000393807.5:c.1012-22T>G
  variant of: http://identifiers.org/hgnc/25312
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn63Lys
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3369
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52482
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 1.520704e6

FS
type: SiteQuality
SIO_000300: 4.227e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.717e0

MQRankSum
type: SiteQuality
SIO_000300: -7.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.23e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.704e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.168e1

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3369
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.520704e6

MQRankSum
type: SiteQuality
SIO_000300: -7.45e-1

FS
type: SiteQuality
SIO_000300: 4.227e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.717e0

QD
type: SiteQuality
SIO_000300: 1.168e1

VQSLOD
type: SiteQuality
SIO_000300: -1.23e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.704e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
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GenotypeQuality
all individuals: 410
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GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 275
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GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3368
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 1.309e1

DP
type: SiteQuality
SIO_000300: 1.520903e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.027e0

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.87e-1

FS
type: SiteQuality
SIO_000300: 2.195e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.61e0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.806767929244376e-4
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

DP
type: SiteQuality
SIO_000300: 1.52101e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.112e1

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3372
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52419
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2423
bin: 9.75e1
variant carriers: 7

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.884060757546626e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-4
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.521069e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.769e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.251e1

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

GenotypeQuality
all individuals: 52439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3378
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.002790865168202e-5
allele num: 66646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.099e0

DP
type: SiteQuality
SIO_000300: 1.520995e6

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

MQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.292e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2419
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 169
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 276
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variant carriers: 0

GenotypeQuality
all individuals: 3378
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000660145231951e-5
allele num: 66652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 1.742e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

DP
type: SiteQuality
SIO_000300: 1.520926e6

QD
type: SiteQuality
SIO_000300: 1.466e1

GenotypeQuality
all individuals: 52369
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3378
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 683
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variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 412
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variant carriers: 0

GenotypeQuality
all individuals: 2427
bin: 9.75e1
variant carriers: 9

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.00225056264066e-5
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

DP
type: SiteQuality
SIO_000300: 1.52153e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.363e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.29e-1

FS
type: SiteQuality
SIO_000300: 4.041e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
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GenotypeQuality
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GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 31
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GenotypeQuality
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GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 653
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 406
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GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.148e0

QD
type: SiteQuality
SIO_000300: 1.102e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

FS
type: SiteQuality
SIO_000300: 4.088e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

DP
type: SiteQuality
SIO_000300: 1.52132e6

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 52355
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GenotypeQuality
all individuals: 43
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GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 2425
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variant carriers: 9

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
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GenotypeQuality
all individuals: 652
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.472222222222222e-4
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.500750075007501e-5
allele num: 66660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.334e1

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

DP
type: SiteQuality
SIO_000300: 1.521757e6

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 18

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.453223460979156e-4
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001140216641162e-5
allele num: 66654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.809542131589073e-4
allele num: 10396
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.332e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 3.176e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

DP
type: SiteQuality
SIO_000300: 1.52282e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.25e-1

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 404
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.501e-1

DP
type: SiteQuality
SIO_000300: 1.521749e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

FS
type: SiteQuality
SIO_000300: 1.548e0

MQ
type: SiteQuality
SIO_000300: 5.78e1

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.089e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-1

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499835018148004e-5
allele num: 66674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.429999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 1.486e0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

QD
type: SiteQuality
SIO_000300: 1.252e1

DP
type: SiteQuality
SIO_000300: 1.521744e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
all individuals: 682
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 275
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variant carriers: 0

GenotypeQuality
all individuals: 2416
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999760019198464e-5
allele num: 66672
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.297e1

FS
type: SiteQuality
SIO_000300: 5.2e-1

DP
type: SiteQuality
SIO_000300: 1.521925e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.864e0

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e0

FS
type: SiteQuality
SIO_000300: 5.795e0

QD
type: SiteQuality
SIO_000300: 1.045e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-1

DP
type: SiteQuality
SIO_000300: 1.52173e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 685
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variant carriers: 0

GenotypeQuality
all individuals: 120
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GenotypeQuality
all individuals: 275
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variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 3391
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.902e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.88e-1

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.15e-1

DP
type: SiteQuality
SIO_000300: 1.521872e6

GenotypeQuality
all individuals: 3395
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.350459156113078e-4
allele num: 66644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.245e1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.521892e6

MQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

FS
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.515e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.677e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.521242e6

VQSLOD
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 5.926e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

QD
type: SiteQuality
SIO_000300: 1.167e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.9e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.521009e6

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.103e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 34
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 5
allele frequency: 5.784359093012494e-4
allele num: 8644
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.519903e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.137e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.926411096127914e-4
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.519903e6

InbreedingCoeff
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MQRankSum
type: SiteQuality
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MQ
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QD
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FS
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

VQSLOD
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SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

VQSLOD
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QD
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MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

DP
type: SiteQuality
SIO_000300: 1.519903e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2424
bin: 9.75e1
variant carriers: 15

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.103744665504598e-4
allele num: 66548
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

DP
type: SiteQuality
SIO_000300: 1.520086e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

FS
type: SiteQuality
SIO_000300: 2.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.526e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 395
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502810255177181e-5
allele num: 66542
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.178e0

FS
type: SiteQuality
SIO_000300: 2.867e0

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.12e-2

MQ
type: SiteQuality
SIO_000300: 5.935e1

MQRankSum
type: SiteQuality
SIO_000300: -1.61e-1

QD
type: SiteQuality
SIO_000300: 1.529e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

DP
type: SiteQuality
SIO_000300: 1.519182e6

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509661835748792e-5
allele num: 66240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

DP
type: SiteQuality
SIO_000300: 1.512422e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.59e-2

FS
type: SiteQuality
SIO_000300: 6.361e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.327e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.87e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515748628247491e-5
allele num: 65974
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
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MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 1.50573e6

MQ
type: SiteQuality
SIO_000300: 6.136e1

ClippingRankSum
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SIO_000300: 1.34e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.612e0

FS
type: SiteQuality
SIO_000300: 1.412e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.16e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15126
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.666555562962469e-5
allele num: 60004
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10508
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 842
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.323246e6

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.698e1

QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7778
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.66688891852247e-5
allele num: 59992
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Other
type: Population
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African
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.237430167597765e-5
allele num: 57280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.259e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.198264e6

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.654e1

GenotypeQuality
all individuals: 97
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3410
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12331
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5800
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.463271875914545e-4
allele num: 6834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.848497171799327e-5
allele num: 54098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

DP
type: SiteQuality
SIO_000300: 1.040847e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.047e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

GenotypeQuality
all individuals: 2400
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 385
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 11594
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6870
bin: 3.25e1
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GenotypeQuality
all individuals: 22624
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.863724466974803e-5
allele num: 53656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13968
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 6.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.566e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.65e0

FS
type: SiteQuality
SIO_000300: 4.901e0

DP
type: SiteQuality
SIO_000300: 1.03291e6

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 322
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 875
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9352
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.166690741008233e-4
allele num: 13846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6728
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.259445843828715e-3
allele num: 794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.513430256583643e-5
allele num: 53238
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.32e-1

DP
type: SiteQuality
SIO_000300: 1.023994e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.409e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

FS
type: SiteQuality
SIO_000300: 5.066e0

QD
type: SiteQuality
SIO_000300: 1.664e1

GenotypeQuality
all individuals: 340
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5924
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4598
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7924
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 346
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variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.219591595146493e-4
allele num: 13516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.80199e5

QD
type: SiteQuality
SIO_000300: 1.137e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.404e0

GenotypeQuality
all individuals: 3128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
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variant carriers: 0

GenotypeQuality
all individuals: 145
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variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5864
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variant carriers: 0

GenotypeQuality
all individuals: 288
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variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5616
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.605651894669236e-4
allele num: 6228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13386
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.63041e5

VQSLOD
type: SiteQuality
SIO_000300: -2.397e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

QD
type: SiteQuality
SIO_000300: 2.499e1

GenotypeQuality
all individuals: 5606
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
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GenotypeQuality
all individuals: 789
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variant carriers: 0

GenotypeQuality
all individuals: 8297
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variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5830
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2398
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.857928650007858e-5
allele num: 12726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 9.39077e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.234e1

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3062
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2576
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15471
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.104142743573889e-4
allele num: 45284
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.922e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.109e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.134e0

DP
type: SiteQuality
SIO_000300: 9.31725e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
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variant carriers: 0

GenotypeQuality
all individuals: 5809
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variant carriers: 0

GenotypeQuality
all individuals: 3574
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1890
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GenotypeQuality
all individuals: 374
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variant carriers: 0

GenotypeQuality
all individuals: 1481
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variant carriers: 0

GenotypeQuality
all individuals: 5316
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.624220374220374e-5
allele num: 61568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7968
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.273072e6

VQSLOD
type: SiteQuality
SIO_000300: -5.916e-1

MQ
type: SiteQuality
SIO_000300: 5.476e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.671e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

GenotypeQuality
all individuals: 96
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variant carriers: 0

GenotypeQuality
all individuals: 6005
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variant carriers: 0

GenotypeQuality
all individuals: 321
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9967
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3523
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GenotypeQuality
all individuals: 1308
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variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7974
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.407337723424271e-5
allele num: 10630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.007e0

QD
type: SiteQuality
SIO_000300: 8.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 1.285183e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

GenotypeQuality
all individuals: 6270
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
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variant carriers: 0

GenotypeQuality
all individuals: 5660
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variant carriers: 0

GenotypeQuality
all individuals: 4976
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GenotypeQuality
all individuals: 1987
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variant carriers: 0

GenotypeQuality
all individuals: 1354
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GenotypeQuality
all individuals: 4003
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GenotypeQuality
all individuals: 5282
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variant carriers: 7

GenotypeQuality
all individuals: 14447
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GenotypeQuality
all individuals: 528
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.513194269917064e-4
allele num: 7958
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.414422895876483e-5
allele num: 10622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.008032128514056e-4
allele num: 9960
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.483239394838327e-4
allele num: 13484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

DP
type: SiteQuality
SIO_000300: 1.311656e6

FS
type: SiteQuality
SIO_000300: 4.172e0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.302e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.657e0

GenotypeQuality
all individuals: 1591
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 2.75e1
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GenotypeQuality
all individuals: 500
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.621902166861295e-5
allele num: 61656
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.252191334835963e-4
allele num: 7986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

DP
type: SiteQuality
SIO_000300: 1.330785e6

VQSLOD
type: SiteQuality
SIO_000300: 1.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.97e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.621902166861295e-5
allele num: 61656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

DP
type: SiteQuality
SIO_000300: 1.330785e6

QD
type: SiteQuality
SIO_000300: 1.301e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeQuality
all individuals: 819
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.615508885298869e-5
allele num: 61900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.589e0

DP
type: SiteQuality
SIO_000300: 1.34465e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.898e0

QD
type: SiteQuality
SIO_000300: 3.24e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 205
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1632
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.606787068577672e-5
allele num: 62236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10736
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 1.394365e6

QD
type: SiteQuality
SIO_000300: 2.157e1

VQSLOD
type: SiteQuality
SIO_000300: -2.748e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.633e0

FS
type: SiteQuality
SIO_000300: 4.771e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.041e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e0

GenotypeQuality
all individuals: 1764
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
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variant carriers: 0

GenotypeQuality
all individuals: 2037
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variant carriers: 0

GenotypeQuality
all individuals: 145
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GenotypeQuality
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GenotypeQuality
all individuals: 1831
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5390
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14160
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10882
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.41721053903795e-4
allele num: 8274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.459999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.936e1

DP
type: SiteQuality
SIO_000300: 1.459513e6

FS
type: SiteQuality
SIO_000300: 2.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 9.65e0

MQRankSum
type: SiteQuality
SIO_000300: -2.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 416
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GenotypeQuality
all individuals: 432
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.936736958934517e-5
allele num: 14416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.243e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.67e0

VQSLOD
type: SiteQuality
SIO_000300: -3.715e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.493018e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.082e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.7002700270027e-4
allele num: 11110
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.544717e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

FS
type: SiteQuality
SIO_000300: 2.284e0

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.439e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.912655971479501e-5
allele num: 11220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65626
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.578453e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

FS
type: SiteQuality
SIO_000300: 7.44e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.6e1

VQSLOD
type: SiteQuality
SIO_000300: 4.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65982
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.858965272856131e-5
allele num: 11288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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FS
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2539
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514187941007238e-5
allele num: 66042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.444e0

VQSLOD
type: SiteQuality
SIO_000300: 6.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.12e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

QD
type: SiteQuality
SIO_000300: 1.218e1

DP
type: SiteQuality
SIO_000300: 1.593474e6

GenotypeQuality
all individuals: 1023
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
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GenotypeQuality
all individuals: 5635
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2611
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508295625942685e-5
allele num: 66300
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.605678e6

FS
type: SiteQuality
SIO_000300: 9.483000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.339e-1

QD
type: SiteQuality
SIO_000300: 1.114e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.267e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5698
bin: 9.75e1
variant carriers: 65

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2610
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35538
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2543
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 55
allele frequency: 8.293874596616099e-4
allele num: 66314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.853564547206166e-4
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.762114537444934e-4
allele num: 11350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.105006105006105e-4
allele num: 6552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.02e1

DP
type: SiteQuality
SIO_000300: 1.609341e6

QD
type: SiteQuality
SIO_000300: 1.248e1

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35798
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1342
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 220
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variant carriers: 0

GenotypeQuality
all individuals: 2621
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503849855630414e-5
allele num: 66496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.239e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.56e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.951e0

FS
type: SiteQuality
SIO_000300: 1.3686e1

QD
type: SiteQuality
SIO_000300: 1.572e1

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.616305e6

GenotypeQuality
all individuals: 1072
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35701
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5779
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7519
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.400888328681612e-4
allele num: 66642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.999e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.622422e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 1.441e1

VQSLOD
type: SiteQuality
SIO_000300: 2.07e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

FS
type: SiteQuality
SIO_000300: 1.179e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.364e1

FS
type: SiteQuality
SIO_000300: 1.3725e1

VQSLOD
type: SiteQuality
SIO_000300: -1.782e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

DP
type: SiteQuality
SIO_000300: 1.622384e6

MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5789
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7526
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2673
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.545e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

DP
type: SiteQuality
SIO_000300: 1.623104e6

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.341e0

QD
type: SiteQuality
SIO_000300: 1.283e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: -1.521e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7526
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2674
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 1.544e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-1

QD
type: SiteQuality
SIO_000300: 1.593e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.623181e6

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 18

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 13

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 33

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 18

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 8

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 65

GenotypeQuality
all individuals: 125
bin: 7.75e1
variant carriers: 63

GenotypeQuality
all individuals: 75
bin: 7.25e1
variant carriers: 27

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 94
bin: 8.25e1
variant carriers: 62

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 11

European (Finnish)
type: Population
allele count: 5534
allele frequency: 8.36963097398669e-1
allele num: 6612
num of homozygotes: 2309

African
type: Population
allele count: 5758
allele frequency: 5.533346146453969e-1
allele num: 10406
num of homozygotes: 1600

Other
type: Population
allele count: 754
allele frequency: 8.303964757709251e-1
allele num: 908
num of homozygotes: 309

Latino
type: Population
allele count: 10685
allele frequency: 9.271954182575495e-1
allele num: 11524
num of homozygotes: 4960

South Asian
type: Population
allele count: 13816
allele frequency: 8.370289591663638e-1
allele num: 16506
num of homozygotes: 5796

European (Non-Finnish)
type: Population
allele count: 56115
allele frequency: 8.410773704247729e-1
allele num: 66718
num of homozygotes: 23630

East Asian
type: Population
allele count: 8233
allele frequency: 9.513519759648718e-1
allele num: 8654
num of homozygotes: 3918

DP
type: SiteQuality
SIO_000300: 5.174507e6

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.46e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 2.79e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

FS
type: SiteQuality
SIO_000300: 4.495e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.404e0

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-2

QD
type: SiteQuality
SIO_000300: 1.351e1

DP
type: SiteQuality
SIO_000300: 1.767178e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8764
bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: -1.813e-1

QD
type: SiteQuality
SIO_000300: 1.867e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.297e0

FS
type: SiteQuality
SIO_000300: 2.253e0

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

DP
type: SiteQuality
SIO_000300: 1.765921e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.12e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

FS
type: SiteQuality
SIO_000300: 7.83e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

DP
type: SiteQuality
SIO_000300: 1.765139e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.029568589432865e-4
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.038e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.79e-1

DP
type: SiteQuality
SIO_000300: 1.764836e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.570000000000001e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.248e1

DP
type: SiteQuality
SIO_000300: 1.763709e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.698e0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.22e-1

FS
type: SiteQuality
SIO_000300: 5.164e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.711e0

GenotypeQuality
all individuals: 1980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.337e1

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.821e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.392e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.96e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 1.763499e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.0e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.96e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.763499e6

ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 1.817741153659719e-4
allele num: 16504
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VQSLOD
type: SiteQuality
SIO_000300: 7.77e-1

MQRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10400
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele num: 8654
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Other
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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num of homozygotes: 0

African
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East Asian
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Other
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-1

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42669
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.051e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.851e0

DP
type: SiteQuality
SIO_000300: 1.762876e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.337e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 5.48e-1

GenotypeQuality
all individuals: 1967
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2792
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.50030001200048e-5
allele num: 66664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 6.223e0

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.761984e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.401e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

QD
type: SiteQuality
SIO_000300: 9.16e0

GenotypeQuality
all individuals: 2784
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8726
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.356e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.278e-1

FS
type: SiteQuality
SIO_000300: 2.306e0

QD
type: SiteQuality
SIO_000300: 9.09e0

DP
type: SiteQuality
SIO_000300: 1.76161e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.25e-1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2783
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42698
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8724
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 7.505e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.086e0

QD
type: SiteQuality
SIO_000300: 1.617e1

DP
type: SiteQuality
SIO_000300: 1.761176e6

VQSLOD
type: SiteQuality
SIO_000300: -4.72e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.46e-1