4-157694010-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694010
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694010
    reference: chr 4
allele count: 1
allele frequency: 8.278693953241936e-6
allele num: 120792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.143C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.531C>T
  hgvsp: ENST00000502773.1:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*204C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.531C>T
  hgvsp: ENST00000422544.2:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.91C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.42C>T
  hgvsp: ENST00000541126.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.77C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.66C>T
  hgvsp: ENST00000542208.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.453C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*439C>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro177Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-157694024-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694024
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694024
    reference: chr 4
allele count: 3
allele frequency: 2.489626556016598e-5
allele num: 120500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*425C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.439C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.52C>T
  hgvsp: ENSP00000439728.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.517C>T
  hgvsp: ENSP00000422464.1:p.Pro173Ser
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*190C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.129C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.28C>T
  hgvsp: ENSP00000442943.1:p.Pro10Ser
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.63C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.77C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.517C>T
  hgvsp: ENSP00000410048.2:p.Pro173Ser
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro173Ser
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-157694033-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694033
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694033
    reference: chr 4
allele count: 1
allele frequency: 8.325008325008325e-6
allele num: 120120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.120G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*416G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.508G>T
  hgvsp: ENSP00000422464.1:p.Ala170Ser
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.54G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.508G>T
  hgvsp: ENSP00000410048.2:p.Ala170Ser
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.68G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*181G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.43G>T
  hgvsp: ENSP00000439728.1:p.Ala15Ser
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.19G>T
  hgvsp: ENSP00000442943.1:p.Ala7Ser
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.430G>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala170Ser
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

4-157694037-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694037
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694037
    reference: chr 4
allele count: 1
allele frequency: 8.354079296920687e-6
allele num: 119702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*412A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.39A>T
  hgvsp: ENST00000542208.1:c.39A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.50A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.504A>T
  hgvsp: ENST00000422544.2:c.504A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.15A>T
  hgvsp: ENST00000541126.1:c.15A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.504A>T
  hgvsp: ENST00000502773.1:c.504A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.116A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*177A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.426A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.64A>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47655
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr168Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

4-157694043-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694043
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694043
    reference: chr 4
allele count: 2
allele frequency: 1.676727028839705e-5
allele num: 119280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*171A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.420A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.58A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.498A>G
  hgvsp: ENST00000422544.2:c.498A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.33A>G
  hgvsp: ENST00000542208.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.110A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*406A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.9A>G
  hgvsp: ENST00000541126.1:c.9A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.44A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.498A>G
  hgvsp: ENST00000502773.1:c.498A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39271
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.498A>G
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-157694053-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694053
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694053
    reference: chr 4
allele count: 1
allele frequency: 8.452370890034655e-6
allele num: 118310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-8A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2919
  bin: 2.25e1
  variant carriers: 0
hgvs: c.496-8A>G
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

4-157694059-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694059
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694059
    reference: chr 4
allele count: 1
allele frequency: 8.522533578782301e-6
allele num: 117336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-14C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-14C>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43284
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-157694063-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694063
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694063
    reference: chr 4
allele count: 1
allele frequency: 8.570595999245788e-6
allele num: 116678
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-18G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-18G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11748
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

4-157694067-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694067
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694067
    reference: chr 4
allele count: 1
allele frequency: 8.61163259330704e-6
allele num: 116122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-22A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-22A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

4-157694073-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694073
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694071
    reference: chr 4
allele count: 1
allele frequency: 8.662058451570432e-6
allele num: 115446
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-30_7-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-30_108-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-30_*404-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-30_418-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-30_56-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-30_*169-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-30_496-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-30_31-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-30_42-29delCA
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-30_496-29delCA
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8641
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: CTG
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

4-157694085-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694085
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694085
    reference: chr 4
allele count: 6
allele frequency: 5.290352161108858e-5
allele num: 113414
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-40G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-40G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11411
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21899
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

4-157694086-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694086
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694086
    reference: chr 4
allele count: 2
allele frequency: 1.768596795302607e-5
allele num: 113084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-41C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-41C>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5383
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

4-157694086-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694086
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694086
    reference: chr 4
allele count: 3
allele frequency: 2.652895192953911e-5
allele num: 113084
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-41C>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-41C>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8405
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

4-157694090-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694090
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694090
    reference: chr 4
allele count: 65
allele frequency: 5.779832829450472e-4
allele num: 112460
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-45T>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12123
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21868
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

4-157694091-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157694091
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157694091
    reference: chr 4
allele count: 164
allele frequency: 1.463057790782736e-3
allele num: 112094
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000510982
  gene symbol: PDGFC
  hgvsc: ENST00000510982.1:n.108-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*169-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.31-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000504672
  gene symbol: PDGFC
  hgvsc: ENST00000504672.1:n.42-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-46A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22045
  bin: 2.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 2.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 9766
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12105
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4134
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

4-157699328-TAACAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157699328
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157699323
    reference: chr 4
allele count: 2
allele frequency: 1.87336080929187e-4
allele num: 10676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*168+20_*168+24delTTGTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-5288_496-5284delTTGTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.30+20_30+24delTTGTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-5288_*404-5284delTTGTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-5288_7-5284delTTGTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-5288_56-5284delTTGTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-5288_496-5284delTTGTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-5288_418-5284delTTGTT
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: TAACAA
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff

4-157699349-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157699349
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157699349
    reference: chr 4
allele count: 3
allele frequency: 2.806361085126286e-4
allele num: 10690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-5304A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*168+4A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-5304A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.30+4A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-5304A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-5304A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-5304A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-5304A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: c.*168+4A>G
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

4-157699365-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157699365
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157699365
    reference: chr 4
allele count: 1
allele frequency: 9.361542782250516e-5
allele num: 10682
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-5320G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-5320G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-5320G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.18G>C
  hgvsp: ENSP00000439728.1:p.Trp6Cys
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*156G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-5320G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-5320G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-5320G>C
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2570
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Trp6Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-157699382-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157699382
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157699382
    reference: chr 4
allele count: 1
allele frequency: 9.368559115608019e-5
allele num: 10674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.1A>G
  hgvsp: ENSP00000439728.1:p.Met1?
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-5337A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*139A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-5337A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-5337A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-5337A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-5337A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-5337A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: start lost
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2558
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

4-157699408-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157699408
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157699408
    reference: chr 4
allele count: 39
allele frequency: 3.663347736238963e-3
allele num: 10646
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-5363G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-5363G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-26G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-5363G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-5363G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-5363G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*113G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-5363G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS

http://identifiers.org/exac.variant/4-157699412-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157699412
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157699412
    reference: chr 4
allele count: 1
allele frequency: 9.38790837401427e-5
allele num: 10652
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-5367T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-5367T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-5367T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-5367T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-5367T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*109T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-30T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-5367T>G
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-157700256-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157700256
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157700256
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 10744
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-6211G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-6211G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-96G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-6211G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-6211G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-6211G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-6211G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.*43G>T
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

4-157700302-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157700302
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157700302
    reference: chr 4
allele count: 2
allele frequency: 1.859773107680863e-4
allele num: 10754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.158G>A
  hgvsp: ENST00000506880.1:c.158G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-6257G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-142G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-6257G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-6257G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-6257G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-6257G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-6257G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1444
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro53Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

4-157700319-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157700319
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157700319
    reference: chr 4
allele count: 1
allele frequency: 9.297136481963555e-5
allele num: 10756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-6274T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-6274T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-6274T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.150-9T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-6274T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-6274T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-6274T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-150-9T>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3499
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

4-157700354-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157700354
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157700354
    reference: chr 4
allele count: 1
allele frequency: 9.305788200260562e-5
allele num: 10746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*404-6309C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.418-6309C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-150-44C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.496-6309C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.496-6309C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.56-6309C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.150-44C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.7-6309C>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3497
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/4-157731949-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731949
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731949
    reference: chr 4
allele count: 1
allele frequency: 8.309098462816784e-6
allele num: 120350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.149+40G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.55+40G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-151+40G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.495+40G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*403+40G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.495+40G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.6+40G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25118G>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34654
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5904
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/4-157731954-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731954
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731954
    reference: chr 4
allele count: 1
allele frequency: 8.303027283747654e-6
allele num: 120438
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.495+35G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25113G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.149+35G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.6+35G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.55+35G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-151+35G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.495+35G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*403+35G>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11581
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8790
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/4-157731955-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731955
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731955
    reference: chr 4
allele count: 5
allele frequency: 4.150893272232185e-5
allele num: 120456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-151+34G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25112G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*403+34G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.55+34G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.495+34G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.495+34G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.149+34G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.6+34G>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26295
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

4-157731958-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731958
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731958
    reference: chr 4
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.6+31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.495+31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-151+31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.55+31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*403+31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25109A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.495+31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.149+31A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8800
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

4-157731959-TAAATAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731959
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731953
    reference: chr 4
allele count: 1
allele frequency: 8.295726041943191e-6
allele num: 120544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*403+24_*403+29delTTATTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.55+24_55+29delTTATTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-151+24_-151+29delTTATTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.6+24_6+29delTTATTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.149+24_149+29delTTATTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.495+24_495+29delTTATTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.495+24_495+29delTTATTT
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12485
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35742
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8805
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5901
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: TAAATAA
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/4-157731961-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731961
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731961
    reference: chr 4
allele count: 7
allele frequency: 5.805178218971322e-5
allele num: 120582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*403+28T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.495+28T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.55+28T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.149+28T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25106T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.495+28T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-151+28T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.6+28T>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2613
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

4-157731967-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731967
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731967
    reference: chr 4
allele count: 1
allele frequency: 8.285141427364165e-6
allele num: 120698
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.495+22C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.6+22C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*403+22C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-151+22C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25100C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.149+22C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.495+22C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.55+22C>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8816
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

4-157731970-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731970
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731970
    reference: chr 4
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*403+19T>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25097T>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.495+19T>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.495+19T>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.149+19T>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-151+19T>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.55+19T>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.6+19T>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8826
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

4-157731999-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157731999
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157731999
    reference: chr 4
allele count: 15
allele frequency: 1.239607953324629e-4
allele num: 121006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.485T>C
  hgvsp: ENSP00000410048.2:p.Ile162Thr
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.485T>C
  hgvsp: ENSP00000422464.1:p.Ile162Thr
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.139T>C
  hgvsp: ENSP00000424600.1:p.Ile47Thr
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-5T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*393T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25068T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.45T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-161T>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5902
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile162Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

4-157732000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732000
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732000
    reference: chr 4
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-162A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.138A>G
  hgvsp: ENSP00000424600.1:p.Ile47Val
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25067A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.44A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-6A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*392A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.484A>G
  hgvsp: ENSP00000410048.2:p.Ile162Val
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.484A>G
  hgvsp: ENSP00000422464.1:p.Ile162Val
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8860
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile162Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

4-157732010-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732010
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732010
    reference: chr 4
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.474C>G
  hgvsp: ENSP00000422464.1:p.Ile158Met
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*382C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.474C>G
  hgvsp: ENSP00000410048.2:p.Ile158Met
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-172C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.128C>G
  hgvsp: ENSP00000424600.1:p.Ile43Met
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25057C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.34C>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12664
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile158Met
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD

4-157732012-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732012
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732012
    reference: chr 4
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25055A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.472A>C
  hgvsp: ENSP00000410048.2:p.Ile158Leu
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-18A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*380A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-174A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.472A>C
  hgvsp: ENSP00000422464.1:p.Ile158Leu
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.126A>C
  hgvsp: ENSP00000424600.1:p.Ile43Leu
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.32A>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile158Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

4-157732023-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732023
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732023
    reference: chr 4
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.118-3C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-182-3C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*369C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.461C>T
  hgvsp: ENSP00000422464.1:p.Pro154Leu
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.461C>T
  hgvsp: ENSP00000410048.2:p.Pro154Leu
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25044C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.21C>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5886
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36216
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro154Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

4-157732027-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732027
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732027
    reference: chr 4
allele count: 1
allele frequency: 8.261868173631421e-6
allele num: 121038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-33G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*365G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-182-7G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25040G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.118-7G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.457G>A
  hgvsp: ENSP00000410048.2:p.Glu153Lys
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.17G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.457G>A
  hgvsp: ENSP00000422464.1:p.Glu153Lys
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8847
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2981
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu153Lys
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

4-157732040-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732040
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732040
    reference: chr 4
allele count: 1
allele frequency: 8.263097008758882e-6
allele num: 121020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.118-20A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25027A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*352A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.444A>G
  hgvsp: ENST00000502773.1:c.444A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.444A>G
  hgvsp: ENST00000422544.2:c.444A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000511985
  gene symbol: PDGFC
  hgvsc: ENST00000511985.1:n.4A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-182-20A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2977
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36159
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8842
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu148Glu
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

4-157732049-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732049
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732049
    reference: chr 4
allele count: 1
allele frequency: 8.266375690242371e-6
allele num: 120972
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.435A>T
  hgvsp: ENST00000502773.1:c.435A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-182-29A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*343A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-55A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25018A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.118-29A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.435A>T
  hgvsp: ENST00000422544.2:c.435A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11610
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val145Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

4-157732067-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732067
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732067
    reference: chr 4
allele count: 1
allele frequency: 8.266239026567692e-6
allele num: 120974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.417A>G
  hgvsp: ENST00000422544.2:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*325A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+38A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.417A>G
  hgvsp: ENST00000502773.1:c.417A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+38A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-73A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+25000A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5886
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln139Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

4-157732074-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732074
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732074
    reference: chr 4
allele count: 1
allele frequency: 8.267195767195768e-6
allele num: 120960
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-80G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.410G>C
  hgvsp: ENSP00000410048.2:p.Gly137Ala
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+31G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24993G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.410G>C
  hgvsp: ENSP00000422464.1:p.Gly137Ala
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*318G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+31G>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36096
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly137Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

4-157732075-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732075
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732075
    reference: chr 4
allele count: 1
allele frequency: 8.267605866693123e-6
allele num: 120954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*317G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+30G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.409G>A
  hgvsp: ENSP00000422464.1:p.Gly137Arg
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.409G>A
  hgvsp: ENSP00000410048.2:p.Gly137Arg
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-81G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+30G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24992G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2607
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36022
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly137Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-157732076-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732076
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732076
    reference: chr 4
allele count: 1
allele frequency: 8.266785708380868e-6
allele num: 120966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.408A>T
  hgvsp: ENSP00000410048.2:p.Lys136Asn
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24991A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*316A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.408A>T
  hgvsp: ENSP00000422464.1:p.Lys136Asn
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-82A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+29A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+29A>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2981
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2607
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys136Asn
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

4-157732086-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732086
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732086
    reference: chr 4
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*306A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+19A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24981A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.398A>G
  hgvsp: ENSP00000422464.1:p.Gln133Arg
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.398A>G
  hgvsp: ENSP00000410048.2:p.Gln133Arg
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-92A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+19A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26769
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2974
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5885
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln133Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP

4-157732092-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732092
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732092
    reference: chr 4
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-98G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*300G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+13G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24975G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.392G>A
  hgvsp: ENSP00000422464.1:p.Gly131Glu
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.392G>A
  hgvsp: ENSP00000410048.2:p.Gly131Glu
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+13G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly131Glu
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-157732093-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732093
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732093
    reference: chr 4
allele count: 1
allele frequency: 8.268426187759421e-6
allele num: 120942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-99G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.391G>C
  hgvsp: ENSP00000422464.1:p.Gly131Arg
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*299G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+12G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+12G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24974G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.391G>C
  hgvsp: ENSP00000410048.2:p.Gly131Arg
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly131Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

4-157732097-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732097
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732097
    reference: chr 4
allele count: 1
allele frequency: 8.268699664290793e-6
allele num: 120938
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.387A>G
  hgvsp: ENST00000502773.1:c.387A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+8A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24970A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*295A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-103A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.387A>G
  hgvsp: ENST00000422544.2:c.387A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5879
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
hgvs: c.-183+8A>G
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

4-157732098-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732098
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732098
    reference: chr 4
allele count: 2
allele frequency: 1.653630545863443e-5
allele num: 120946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+7T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.386T>C
  hgvsp: ENSP00000422464.1:p.Val129Ala
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-104T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*294T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.386T>C
  hgvsp: ENSP00000410048.2:p.Val129Ala
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+7T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24969T>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8842
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val129Ala
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/4-157732100-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732100
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732100
    reference: chr 4
allele count: 2
allele frequency: 1.653630545863443e-5
allele num: 120946
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.384T>G
  hgvsp: ENST00000422544.2:c.384T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+5T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+5T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*292T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24967T>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.384T>G
  hgvsp: ENST00000502773.1:c.384T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-106T>G
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36178
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5879
  bin: 9.75e1
  variant carriers: 2
hgvs: c.-183+5T>G
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-157732104-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732104
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732104
    reference: chr 4
allele count: 1
allele frequency: 8.268699664290793e-6
allele num: 120938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24963G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+1G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-110G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+1G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*288G>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.380G>T
  hgvsp: ENSP00000410048.2:p.Gly127Val
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.380G>T
  hgvsp: ENSP00000422464.1:p.Gly127Val
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: c.-183+1G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

4-157732104-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732104
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732104
    reference: chr 4
allele count: 1
allele frequency: 8.268699664290793e-6
allele num: 120938
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-183+1G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.117+1G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-110G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24963G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.380G>C
  hgvsp: ENSP00000410048.2:p.Gly127Ala
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*288G>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.380G>C
  hgvsp: ENSP00000422464.1:p.Gly127Ala
  variant of: http://identifiers.org/hgnc/8801
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5878
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
hgvs: c.-183+1G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-157732109-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732109
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732109
    reference: chr 4
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-115T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.113T>C
  hgvsp: ENST00000506880.1:c.113T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*283T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-187T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.375T>C
  hgvsp: ENST00000422544.2:c.375T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.375T>C
  hgvsp: ENST00000502773.1:c.375T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24958T>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2591
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36169
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly125Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

4-157732120-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732120
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732120
    reference: chr 4
allele count: 3
allele frequency: 2.484760137821362e-5
allele num: 120736
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.364C>T
  hgvsp: ENSP00000422464.1:p.Arg122Cys
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*272C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-126C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.364C>T
  hgvsp: ENSP00000410048.2:p.Arg122Cys
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.102C>T
  hgvsp: ENSP00000424600.1:p.Arg35Cys
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24947C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-198C>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8799
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2956
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg122Cys
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

4-157732129-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732129
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732129
    reference: chr 4
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.355A>G
  hgvsp: ENSP00000422464.1:p.Ile119Val
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24938A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*263A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-135A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.93A>G
  hgvsp: ENSP00000424600.1:p.Ile32Val
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.355A>G
  hgvsp: ENSP00000410048.2:p.Ile119Val
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-207A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35903
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2569
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile119Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

4-157732145-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732145
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732145
    reference: chr 4
allele count: 2
allele frequency: 1.670815859384137e-5
allele num: 119702
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.339A>G
  hgvsp: ENST00000502773.1:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-151A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.339A>G
  hgvsp: ENST00000422544.2:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-223A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24922A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.77A>G
  hgvsp: ENST00000506880.1:c.77A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*247A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34875
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu113Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

4-157732153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732153
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732153
    reference: chr 4
allele count: 1
allele frequency: 8.393345755485052e-6
allele num: 119142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.331G>A
  hgvsp: ENSP00000410048.2:p.Val111Ile
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-159G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.69G>A
  hgvsp: ENSP00000424600.1:p.Val24Ile
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.331G>A
  hgvsp: ENSP00000422464.1:p.Val111Ile
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*239G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-231G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24914G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34542
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val111Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

4-157732167-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732167
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732167
    reference: chr 4
allele count: 1
allele frequency: 8.491703605577351e-6
allele num: 117762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*225A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.55A>G
  hgvsp: ENSP00000424600.1:p.Tyr19Cys
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-245A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.317A>G
  hgvsp: ENSP00000410048.2:p.Tyr106Cys
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.317A>G
  hgvsp: ENSP00000422464.1:p.Tyr106Cys
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24900A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-173A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr106Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

4-157732184-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732184
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732184
    reference: chr 4
allele count: 1
allele frequency: 8.665961835104079e-6
allele num: 115394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.53-15T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*223-15T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24883T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.315-15T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.315-15T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-15T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-247-15T>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5827
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5480
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

4-157732195-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732195
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732195
    reference: chr 4
allele count: 2
allele frequency: 1.759788825340959e-5
allele num: 113650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*223-26G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.315-26G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-26G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-247-26G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.315-26G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.53-26G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24872G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19875
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

4-157732200-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732200
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732200
    reference: chr 4
allele count: 1
allele frequency: 8.851907586084802e-6
allele num: 112970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.315-31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-247-31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.315-31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.53-31A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24867A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*223-31A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6382
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 926
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genotype quality: GenotypeQuality
  all individuals: 6213
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 685
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genotype quality: GenotypeQuality
  all individuals: 5807
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

4-157732205-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732205
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732205
    reference: chr 4
allele count: 8
allele frequency: 7.143367383384528e-5
allele num: 111992
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*223-36A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-36A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24862A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.315-36A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.315-36A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-247-36A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.53-36A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15639
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
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genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3917
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 5521
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 4100
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 542
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-157732221-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157732221
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157732221
    reference: chr 4
allele count: 1
allele frequency: 9.210647508519848e-6
allele num: 108570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.53-52G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*223-52G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-247-52G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.315-52G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-52G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.417+24846G>A
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.315-52G>A
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3024
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5400
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5799
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5336
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4231
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

4-157771324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157771324
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157771324
    reference: chr 4
allele count: 1
allele frequency: 9.2973093586716e-6
allele num: 107558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.314+49C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-39155C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-248+49C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*222+49C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.52+49C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.314+49C>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.324+49C>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6086
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1335
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25858
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

4-157771331-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157771331
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157771331
    reference: chr 4
allele count: 1
allele frequency: 9.278331384883742e-6
allele num: 107778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.324+42T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-248+42T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*222+42T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.52+42T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-39162T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.314+42T>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.314+42T>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2465
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5513
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

4-157771340-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157771340
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157771340
    reference: chr 4
allele count: 36
allele frequency: 3.317299718029524e-4
allele num: 108522
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*222+33A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-39171A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.314+33A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.324+33A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.314+33A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.52+33A>C
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-248+33A>C
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25237
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16644
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4786
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4450
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5712
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3970
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

4-157771344-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157771344
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157771344
    reference: chr 4
allele count: 1
allele frequency: 9.172292339301438e-6
allele num: 109024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.324+29A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.314+29A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-248+29A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*222+29A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.314+29A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-39175A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.52+29A>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39738
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum

4-157771359-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157771359
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157771359
    reference: chr 4
allele count: 1
allele frequency: 9.024944947835819e-6
allele num: 110804
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.314+14C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-248+14C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.314+14C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.324+14C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-39190C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*222+14C>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.52+14C>G
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4178
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-157771362-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157771362
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157771362
    reference: chr 4
allele count: 1
allele frequency: 9.001224166486642e-6
allele num: 111096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.314+11A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.314+11A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-39193A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.52+11A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*222+11A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-248+11A>T
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.324+11A>T
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

4-157771373-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 157771373
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 157771373
    reference: chr 4
allele count: 1
allele frequency: 8.878786802571297e-6
allele num: 112628
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000274071
  ensembl transcript: ENST00000274071
  gene symbol: PDGFC
  hgvsc: ENST00000274071.2:c.*222A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000424600
  ensembl transcript: ENST00000506880
  gene symbol: PDGFC
  hgvsc: ENST00000506880.1:c.52A>G
  hgvsp: ENSP00000424600.1:p.Lys18Arg
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl transcript: ENST00000512711
  gene symbol: PDGFC
  hgvsc: ENST00000512711.1:n.324A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000439728
  ensembl transcript: ENST00000542208
  gene symbol: PDGFC
  hgvsc: ENST00000542208.1:c.-248A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000422464
  ensembl transcript: ENST00000502773
  gene symbol: PDGFC
  hgvsc: ENST00000502773.1:c.314A>G
  hgvsp: ENSP00000422464.1:p.Lys105Arg
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000442943
  ensembl transcript: ENST00000541126
  gene symbol: PDGFC
  hgvsc: ENST00000541126.1:c.-175-39204A>G
  variant of: http://identifiers.org/hgnc/8801
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145431
  ensembl protein: ENSP00000410048
  ensembl transcript: ENST00000422544
  gene symbol: PDGFC
  hgvsc: ENST00000422544.2:c.314A>G
  hgvsp: ENSP00000410048.2:p.Lys105Arg
  variant of: http://identifiers.org/hgnc/8801
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys105Arg
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 743
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48983
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4756
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.667440061871617e-5
allele num: 10344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66438
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 1.499247e6

VQSLOD
type: SiteQuality
SIO_000300: -1.266e-1

QD
type: SiteQuality
SIO_000300: 1.087e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.519e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.916e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.526798647996137e-5
allele num: 66272
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 4.86e-1

QD
type: SiteQuality
SIO_000300: 9.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.492e0

DP
type: SiteQuality
SIO_000300: 1.495255e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66022
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0790273556231e-5
allele num: 16450
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.218e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 1.147e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.76e-1

DP
type: SiteQuality
SIO_000300: 1.489614e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.539e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52077376969402e-5
allele num: 65756
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.481719e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.960399921584003e-4
allele num: 10202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65490
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.161e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 6.59e-1

QD
type: SiteQuality
SIO_000300: 1.568e1

DP
type: SiteQuality
SIO_000300: 1.473266e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.96e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.1667488899852e-5
allele num: 16216
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64948
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

MQRankSum
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QD
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.552602161222208e-5
allele num: 64408
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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Other
type: Population
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European (Non-Finnish)
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allele count: 1
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allele num: 64018
num of homozygotes: 0

European (Finnish)
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East Asian
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QD
type: SiteQuality
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InbreedingCoeff
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DP
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.92e1

BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.907892392659897e-5
allele num: 11226
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.79e-1

VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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QD
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FS
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.835e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.09e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63376
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.299609424215698e-5
allele num: 15874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.97e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
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SIO_000300: 6.149e1

ClippingRankSum
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SIO_000300: -8.48e-1

DP
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BaseQRankSum
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SIO_000300: -3.52e-1

QD
type: SiteQuality
SIO_000300: 1.748e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.761e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 5
allele frequency: 8.030838419531e-5
allele num: 62260
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.991188635137565e-5
allele num: 11122
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

FS
type: SiteQuality
SIO_000300: 1.904e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.141e0

InbreedingCoeff
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SIO_000300: -7.0e-4

QD
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SIO_000300: 1.105e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 1.26525e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11090
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.221130616846513e-5
allele num: 62090
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7626
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.183e0

VQSLOD
type: SiteQuality
SIO_000300: -3.917e-1

MQ
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SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.261344e6

QD
type: SiteQuality
SIO_000300: 1.713e1

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9372
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.921598770176787e-4
allele num: 15612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.713e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

VQSLOD
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

DP
type: SiteQuality
SIO_000300: 1.261344e6

MQ
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SIO_000300: 5.956e1

ClippingRankSum
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SIO_000300: 4.47e-1

BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9260
num of homozygotes: 0

South Asian
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allele count: 62
allele frequency: 3.98406374501992e-3
allele num: 15562
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6408
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11054
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.857512953367875e-5
allele num: 61760
num of homozygotes: 0

FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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DP
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 160

European (Non-Finnish)
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allele count: 2
allele frequency: 3.248651809499058e-5
allele num: 61564
num of homozygotes: 0

Latino
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allele frequency: 6.344027551205366e-4
allele num: 11034
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Other
type: Population
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 7492
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6408
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African
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allele count: 155
allele frequency: 1.681492731612063e-2
allele num: 9218
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.719e0

ReadPosRankSum
type: SiteQuality
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QD
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MQ
type: SiteQuality
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FS
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InbreedingCoeff
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DP
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: NaN
allele num: 0
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European (Non-Finnish)
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African
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Other
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Latino
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East Asian
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South Asian
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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MQRankSum
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VQSLOD
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QD
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FS
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele frequency: 7.462686567164179e-4
allele num: 2680
num of homozygotes: 0

South Asian
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -2.21e-2

MQ
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MQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

East Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 0
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Other
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num of homozygotes: 0

South Asian
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MQRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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South Asian
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European (Non-Finnish)
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: NaN
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.19e-2

QD
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ClippingRankSum
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Non-Finnish)
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African
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South Asian
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East Asian
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European (Finnish)
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

VQSLOD
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DP
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ReadPosRankSum
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MQRankSum
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QD
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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SIO_000300: 1.212e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: NaN
allele num: 0
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African
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Other
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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FS
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ClippingRankSum
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MQ
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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East Asian
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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FS
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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Other
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African
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Latino
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European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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QD
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FS
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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European (Finnish)
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Latino
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East Asian
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQ
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Other
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Latino
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East Asian
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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FS
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QD
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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South Asian
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FS
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.88159e6

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5902
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35335
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2969
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2612
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

DP
type: SiteQuality
SIO_000300: 1.886782e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.418e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

VQSLOD
type: SiteQuality
SIO_000300: -3.908e-1

QD
type: SiteQuality
SIO_000300: 9.92e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

GenotypeQuality
all individuals: 2604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8782
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variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2968
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5903
bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.929994084007099e-4
allele num: 10142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.323e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.614e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.360000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

DP
type: SiteQuality
SIO_000300: 1.888123e6

FS
type: SiteQuality
SIO_000300: 2.826e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 35704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2977
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2607
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5901
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504664459825459e-5
allele num: 66460
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.889436e6

QD
type: SiteQuality
SIO_000300: 1.723e1

VQSLOD
type: SiteQuality
SIO_000300: -3.932e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.272e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2610
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504438092372499e-5
allele num: 66470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.19e0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.102e0

FS
type: SiteQuality
SIO_000300: 5.111e0

MQ
type: SiteQuality
SIO_000300: 5.344e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 3.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 1.889836e6

GenotypeQuality
all individuals: 2980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5901
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8800
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.0530749789385e-4
allele num: 66472
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.891155e6

FS
type: SiteQuality
SIO_000300: 2.602e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.18e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.566e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.22e-1

GenotypeQuality
all individuals: 5897
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1879
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66500
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.893515e6

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.92e-1

FS
type: SiteQuality
SIO_000300: 8.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5898
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503533303262667e-5
allele num: 66510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-1

DP
type: SiteQuality
SIO_000300: 1.89424e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.13e-1

QD
type: SiteQuality
SIO_000300: 1.324e1

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 36300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2989
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8853
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 15
allele frequency: 2.27341618672325e-3
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

DP
type: SiteQuality
SIO_000300: 1.898614e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

QD
type: SiteQuality
SIO_000300: 1.59e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1071
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36298
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5890
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.23e1

VQSLOD
type: SiteQuality
SIO_000300: 9.48e-1

DP
type: SiteQuality
SIO_000300: 1.897553e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.85e-1

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.897781e6

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.444e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.074e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

FS
type: SiteQuality
SIO_000300: 8.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.259e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

QD
type: SiteQuality
SIO_000300: 1.232e1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

DP
type: SiteQuality
SIO_000300: 1.897758e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.897617e6

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.563e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 7.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.278e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.499e0

QD
type: SiteQuality
SIO_000300: 1.099e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.74737578726382e-5
allele num: 11432
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.475e1

FS
type: SiteQuality
SIO_000300: 3.405e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.471e0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

DP
type: SiteQuality
SIO_000300: 1.897608e6

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50159168718842e-5
allele num: 66596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

FS
type: SiteQuality
SIO_000300: 4.536e0

QD
type: SiteQuality
SIO_000300: 1.477e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

VQSLOD
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

DP
type: SiteQuality
SIO_000300: 1.897388e6

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 8841
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1879
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.897267e6

QD
type: SiteQuality
SIO_000300: 1.339e1

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 4.383e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8839
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.897141e6

VQSLOD
type: SiteQuality
SIO_000300: 3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.268e1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 5.867e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.067e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.22e-1

QD
type: SiteQuality
SIO_000300: 1.725e1

FS
type: SiteQuality
SIO_000300: 3.522e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.897226e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1066
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.181e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.143e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 230
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1868
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.502584445245823e-5
allele num: 66552
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQ
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 7.92e-1

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

BaseQRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
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South Asian
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.129e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.74e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 906
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Latino
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allele frequency: 0.0e0
allele num: 11432
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66542
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
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South Asian
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allele count: 1
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allele num: 16464
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East Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e0

MQRankSum
type: SiteQuality
SIO_000300: -8.32e-1

FS
type: SiteQuality
SIO_000300: 7.45e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 1.214771622934888e-4
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66544
num of homozygotes: 0

East Asian
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num of homozygotes: 0

African
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VQSLOD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 8.64e-1

ReadPosRankSum
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MQRankSum
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MQ
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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BaseQRankSum
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FS
type: SiteQuality
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66544
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Other
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African
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Latino
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East Asian
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European (Finnish)
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South Asian
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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Other
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South Asian
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FS
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MQ
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VQSLOD
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BaseQRankSum
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QD
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ClippingRankSum
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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MQRankSum
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SIO_000300: 6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.74e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 6.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

DP
type: SiteQuality
SIO_000300: 1.896459e6

QD
type: SiteQuality
SIO_000300: 1.235e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36015
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1863
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.658103148541626e-5
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00815209216978e-5
allele num: 66486
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.668e0

MQRankSum
type: SiteQuality
SIO_000300: -5.47e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.342e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 1.894819e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-1

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

VQSLOD
type: SiteQuality
SIO_000300: -4.148e-1

QD
type: SiteQuality
SIO_000300: 1.604e1

FS
type: SiteQuality
SIO_000300: 5.811e0

MQRankSum
type: SiteQuality
SIO_000300: -1.243e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.201e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.891426e6

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5859
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8584
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510847887834653e-5
allele num: 66188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e-1

FS
type: SiteQuality
SIO_000300: 4.732e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.01e0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.3e-3

QD
type: SiteQuality
SIO_000300: 1.608e1

DP
type: SiteQuality
SIO_000300: 1.872455e6

GenotypeQuality
all individuals: 2481
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1815
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variant carriers: 0

GenotypeQuality
all individuals: 8414
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.701202949165696e-5
allele num: 10308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.028e0

VQSLOD
type: SiteQuality
SIO_000300: -8.773e-1

QD
type: SiteQuality
SIO_000300: 1.864e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.79e-1

FS
type: SiteQuality
SIO_000300: 2.118e0

DP
type: SiteQuality
SIO_000300: 1.860989e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 8116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 411
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variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.854949273375377e-5
allele num: 14588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-1

FS
type: SiteQuality
SIO_000300: 1.537e0

QD
type: SiteQuality
SIO_000300: 1.35e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: 6.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-1

DP
type: SiteQuality
SIO_000300: 1.828564e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1019
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variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544640098856966e-5
allele num: 64740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.760716e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

FS
type: SiteQuality
SIO_000300: 2.057e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.653e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.75e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.610824742268041e-4
allele num: 12416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64098
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.079e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.692686e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

QD
type: SiteQuality
SIO_000300: 1.169e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 3.718e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.320852055250458e-5
allele num: 12018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.355e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.12e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 2.363e0

DP
type: SiteQuality
SIO_000300: 1.651917e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.960159362549801e-5
allele num: 10040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11144
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.101702917938871e-4
allele num: 63538
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.329e0

MQ
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.604035e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10990
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 9.83671060397403e-5
allele num: 10166
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62140
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -4.286e-1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.52346e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.899e0

QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11110
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.613527817219569e-5
allele num: 61976
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9106
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8302
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

DP
type: SiteQuality
SIO_000300: 1.311206e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -8.100000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.609839338034064e-5
allele num: 62118
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9124
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 2.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.456e1

DP
type: SiteQuality
SIO_000300: 1.339558e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 36

South Asian
type: Population
allele count: 1
allele frequency: 1.078050884001725e-4
allele num: 9276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

East Asian
type: Population
allele count: 35
allele frequency: 4.178605539637058e-3
allele num: 8376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62490
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

DP
type: SiteQuality
SIO_000300: 1.392456e6

FS
type: SiteQuality
SIO_000300: 1.308e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.519e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.25e-3
allele num: 800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9390
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.824e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.41e1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.41036e6

FS
type: SiteQuality
SIO_000300: 2.243e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.827683615819209e-5
allele num: 11328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.948e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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SIO_000300: 1.450824e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.87e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63756
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 808
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6578
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South Asian
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allele count: 1
allele frequency: 1.001401962747847e-4
allele num: 9986
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QD
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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DP
type: SiteQuality
SIO_000300: 1.455263e6