9-96080792-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080792
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080792
    reference: chr 9
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+879A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*436A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+879A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.479T>C
  hgvsp: ENSP00000364568.1:p.Val160Ala
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+879A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+879A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*661A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+879A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+879A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+879A>G
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18792
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val160Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

9-96080792-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080792
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080792
    reference: chr 9
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+879A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+879A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+879A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+879A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.479T>A
  hgvsp: ENSP00000364568.1:p.Val160Asp
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*661A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+879A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+879A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*436A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+879A>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val160Asp
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

9-96080793-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080793
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080793
    reference: chr 9
allele count: 5
allele frequency: 4.142639358388016e-5
allele num: 120696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+880C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.478G>A
  hgvsp: ENSP00000364568.1:p.Val160Ile
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*662C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+880C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+880C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+880C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+880C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+880C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+880C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*437C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7374
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4617
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val160Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

9-96080794-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080794
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080794
    reference: chr 9
allele count: 33
allele frequency: 2.734096671030174e-4
allele num: 120698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+881G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.477C>T
  hgvsp: ENST00000375419.1:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+881G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+881G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*663G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+881G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+881G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+881G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*438G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+881G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18803
  bin: 9.75e1
  variant carriers: 33
hgvs: p.Asn159Asn
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

9-96080801-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080801
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080801
    reference: chr 9
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+888G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+888G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+888G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*670G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+888G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*445G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+888G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+888G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.470C>T
  hgvsp: ENSP00000364568.1:p.Ser157Leu
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+888G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15615
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser157Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

9-96080809-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080809
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080809
    reference: chr 9
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*453A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+896A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+896A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+896A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+896A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*678A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.462T>C
  hgvsp: ENST00000375419.1:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+896A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+896A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+896A>G
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18771
  bin: 9.75e1
  variant carriers: 1
hgvs: p.His154His
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

9-96080809-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080809
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080809
    reference: chr 9
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+896A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*678A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+896A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+896A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+896A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+896A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+896A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.462T>A
  hgvsp: ENSP00000364568.1:p.His154Gln
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*453A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+896A>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4616
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His154Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff

9-96080818-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080818
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080819
    reference: chr 9
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.452dupA
  hgvsp: ENSP00000364568.1:p.His151GlnfsTer9
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*688dupT
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+906dupT
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+906dupT
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+906dupT
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*463dupT
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+906dupT
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+906dupT
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+906dupT
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+906dupT
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His151GlnfsTer9
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

9-96080819-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080819
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080819
    reference: chr 9
allele count: 15
allele frequency: 1.243018380098447e-4
allele num: 120674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+906T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+906T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+906T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+906T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*463T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+906T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+906T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.452A>G
  hgvsp: ENSP00000364568.1:p.His151Arg
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*688T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+906T>C
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His151Arg
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

9-96080831-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080831
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080831
    reference: chr 9
allele count: 4
allele frequency: 3.315704835955503e-5
allele num: 120638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*475G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+918G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+918G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*700G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440C>T
  hgvsp: ENSP00000364568.1:p.Ala147Val
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+918G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+918G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+918G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+918G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+918G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3887
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4609
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala147Val
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

9-96080838-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080838
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080838
    reference: chr 9
allele count: 18
allele frequency: 1.492685839387004e-4
allele num: 120588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+925G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-7C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+925G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*707G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+925G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*482G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+925G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+925G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+925G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+925G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11585
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
hgvs: c.440-7C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

9-96080838-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080838
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080838
    reference: chr 9
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-7C>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+925G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*482G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+925G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+925G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+925G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+925G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*707G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+925G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+925G>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6372
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: c.440-7C>A
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-96080844-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080844
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080844
    reference: chr 9
allele count: 1
allele frequency: 8.295726041943191e-6
allele num: 120544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+931A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+931A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+931A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+931A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*713A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+931A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+931A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*488A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+931A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-13T>A
  variant of: http://identifiers.org/hgnc/31116
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12808
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3890
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

9-96080848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080848
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080848
    reference: chr 9
allele count: 4
allele frequency: 3.320604349991699e-5
allele num: 120460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+935G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*492G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-17C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+935G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+935G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+935G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+935G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*717G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+935G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+935G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12794
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

9-96080853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080853
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080853
    reference: chr 9
allele count: 1
allele frequency: 8.303440945927993e-6
allele num: 120432
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+940G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-22C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+940G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+940G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*497G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+940G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+940G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+940G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*722G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+940G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18729
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

9-96080856-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080856
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080856
    reference: chr 9
allele count: 3
allele frequency: 2.4919013207077e-5
allele num: 120390
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-25A>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+943T>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+943T>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+943T>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*725T>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*500T>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+943T>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+943T>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+943T>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+943T>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

9-96080859-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080859
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080859
    reference: chr 9
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-28C>G
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+946G>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+946G>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+946G>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+946G>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*728G>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+946G>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+946G>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*503G>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+946G>C
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3881
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/9-96080868-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080868
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080867
    reference: chr 9
allele count: 26
allele frequency: 2.163457537985322e-4
allele num: 120178
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+958delC
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+958delC
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+958delC
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+958delC
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+958delC
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*740delC
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-38delG
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*515delC
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+958delC
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+958delC
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4937
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7335
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9654
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18728
  bin: 9.75e1
  variant carriers: 25
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: AC
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/9-96080870-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080870
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080870
    reference: chr 9
allele count: 2
allele frequency: 1.6654730776277e-5
allele num: 120086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+957C>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+957C>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+957C>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*739C>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+957C>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-39G>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*514C>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+957C>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+957C>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+957C>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9871
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4559
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

9-96080880-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080880
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080880
    reference: chr 9
allele count: 2
allele frequency: 1.671849399806065e-5
allele num: 119628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*524C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+967C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-49G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+967C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+967C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*749C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+967C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+967C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+967C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+967C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4908
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10272
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18675
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

9-96080881-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96080881
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96080881
    reference: chr 9
allele count: 7
allele frequency: 5.852940684626833e-5
allele num: 119598
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.440-50C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6628+968G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*750G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*618+968G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2060+968G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2144+968G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5575+968G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4093+968G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*525G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3018+968G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9126
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8878
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18662
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

9-96081334-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081334
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081334
    reference: chr 9
allele count: 1
allele frequency: 8.34599142032082e-6
allele num: 119818
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+49T>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1315A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1315A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1315A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1203A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1315A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1315A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1315A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*978A>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1315A>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

9-96081342-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081342
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081342
    reference: chr 9
allele count: 2
allele frequency: 1.66730580055688e-5
allele num: 119954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1211C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1307C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*986C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1307C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1307C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+41G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1307C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1307C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1307C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1307C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

9-96081343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081343
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081343
    reference: chr 9
allele count: 3
allele frequency: 2.500666844491865e-5
allele num: 119968
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1306C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1306C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*987C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1306C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+40G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1212C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1306C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1306C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1306C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1306C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

9-96081352-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081352
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081352
    reference: chr 9
allele count: 1
allele frequency: 8.324038157390913e-6
allele num: 120134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1221G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1297G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1297G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1297G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1297G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1297G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*996G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+31C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1297G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1297G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4690
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-96081356-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081356
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081356
    reference: chr 9
allele count: 1
allele frequency: 8.317945134833891e-6
allele num: 120222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1293C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1000C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1293C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1293C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1293C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1225C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1293C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+27G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1293C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1293C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

9-96081362-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081362
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081362
    reference: chr 9
allele count: 1
allele frequency: 8.313795912937929e-6
allele num: 120282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1287T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1287T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+21A>G
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1287T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1006T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1287T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1287T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1287T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1231T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1287T>C
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7026
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28057
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

9-96081366-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081366
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081366
    reference: chr 9
allele count: 1
allele frequency: 8.307855908547122e-6
allele num: 120368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1235G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1283G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1283G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1283G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1283G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1283G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1010G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1283G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1283G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+17C>A
  variant of: http://identifiers.org/hgnc/31116
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3407
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1998
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

9-96081369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081369
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081369
    reference: chr 9
allele count: 1
allele frequency: 8.30357884248111e-6
allele num: 120430
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1280G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1013G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1280G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1280G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1280G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1280G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1280G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1280G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1238G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+14C>T
  variant of: http://identifiers.org/hgnc/31116
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15494
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19976
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

9-96081382-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081382
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081382
    reference: chr 9
allele count: 2
allele frequency: 1.658044833532299e-5
allele num: 120624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1267C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1267C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1267C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1267C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.439+1G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1267C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1026C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1251C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1267C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1267C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
hgvs: c.439+1G>A
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-96081386-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081386
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081386
    reference: chr 9
allele count: 1
allele frequency: 8.287475966319697e-6
allele num: 120664
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1263T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1263T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1263T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1263T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1030T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.436A>G
  hgvsp: ENSP00000364568.1:p.Thr146Ala
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1263T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1263T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1263T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1255T>C
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr146Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

9-96081404-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081404
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081404
    reference: chr 9
allele count: 6
allele frequency: 4.970425965505244e-5
allele num: 120714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1048C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1245C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1273C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.418G>A
  hgvsp: ENSP00000364568.1:p.Asp140Asn
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1245C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1245C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1245C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1245C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1245C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1245C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15553
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4667
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp140Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-96081414-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081414
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081414
    reference: chr 9
allele count: 1
allele frequency: 8.283357078956959e-6
allele num: 120724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1235T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.408A>G
  hgvsp: ENST00000375419.1:c.408A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1235T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1235T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1058T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1283T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1235T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1235T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1235T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1235T>C
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3244
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val136Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

9-96081425-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081425
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081425
    reference: chr 9
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1224C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1224C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1224C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.397G>A
  hgvsp: ENSP00000364568.1:p.Asp133Asn
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1224C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1069C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1224C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1294C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1224C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1224C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp133Asn
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

9-96081431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081431
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081431
    reference: chr 9
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.391G>A
  hgvsp: ENSP00000364568.1:p.Ala131Thr
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1075C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1218C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1300C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1218C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1218C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1218C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1218C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1218C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1218C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3240
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala131Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

9-96081433-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081433
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081433
    reference: chr 9
allele count: 532
allele frequency: 4.407111022747983e-3
allele num: 120714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1216C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1077C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1302C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1216C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1216C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.389G>A
  hgvsp: ENSP00000364568.1:p.Arg130His
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1216C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1216C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1216C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1216C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 15465
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7826
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 20245
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg130His
num of homozygotes: 5
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

9-96081440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081440
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081440
    reference: chr 9
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1209C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1209C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1209C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1209C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1309C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1084C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1209C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.382G>A
  hgvsp: ENSP00000364568.1:p.Gly128Arg
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1209C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1209C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20464
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29156
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly128Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ

9-96081443-AAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081443
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081441
    reference: chr 9
allele count: 24
allele frequency: 1.988499842577096e-4
allele num: 120694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1204_*4094-1203delTA
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1314_*1315delTA
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1089_*1090delTA
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1204_6629-1203delTA
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1204_2145-1203delTA
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.377_378delAT
  hgvsp: ENSP00000364568.1:p.Tyr126LeufsTer7
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1204_*619-1203delTA
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1204_3019-1203delTA
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1204_5576-1203delTA
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1204_2061-1203delTA
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4665
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr126LeufsTer7
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: AAT
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

9-96081445-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081445
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081445
    reference: chr 9
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1204T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1204T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1204T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1204T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1314T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.377A>G
  hgvsp: ENSP00000364568.1:p.Tyr126Cys
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1089T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1204T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1204T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1204T>C
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29126
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr126Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

9-96081445-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081445
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081445
    reference: chr 9
allele count: 24
allele frequency: 1.988928299134816e-4
allele num: 120668
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.377A>C
  hgvsp: ENSP00000364568.1:p.Tyr126Ser
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1204T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1204T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1204T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1089T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1204T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1204T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1204T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1204T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1314T>G
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29126
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr126Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

9-96081451-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081451
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081451
    reference: chr 9
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.371C>T
  hgvsp: ENSP00000364568.1:p.Thr124Ile
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1198G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1198G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1095G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1320G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1198G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1198G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1198G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1198G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1198G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20468
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9146
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr124Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/9-96081467-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081467
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081467
    reference: chr 9
allele count: 3
allele frequency: 2.489006886252385e-5
allele num: 120530
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-11T>G
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1336A>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1182A>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1182A>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1182A>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1182A>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1111A>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1182A>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1182A>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1182A>C
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4660
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

9-96081472-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081472
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081472
    reference: chr 9
allele count: 1
allele frequency: 8.301510874979247e-6
allele num: 120460
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1177A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-16T>C
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1341A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1177A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1177A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1177A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1177A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1116A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1177A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1177A>G
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

9-96081475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081475
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081475
    reference: chr 9
allele count: 2
allele frequency: 1.661405549094534e-5
allele num: 120380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1344C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1174C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1174C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1119C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1174C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1174C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1174C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-19G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1174C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1174C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15571
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9006
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

9-96081485-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081485
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081485
    reference: chr 9
allele count: 1
allele frequency: 8.320436656515735e-6
allele num: 120186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1164C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1129C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-29G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1354C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1164C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1164C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1164C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1164C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1164C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1164C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15208
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4609
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

9-96081486-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081486
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081486
    reference: chr 9
allele count: 2
allele frequency: 1.664198106142555e-5
allele num: 120178
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-30C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1130G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1163G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1163G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1163G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1163G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1355G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1163G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1163G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1163G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3179
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

9-96081486-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081486
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081486
    reference: chr 9
allele count: 1
allele frequency: 8.320990530712775e-6
allele num: 120178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1163G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-30C>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000415038
  ensembl transcript: ENST00000432730
  gene symbol: WNK2
  hgvsc: ENST00000432730.1:c.*1130G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1163G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1163G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000414622
  ensembl transcript: ENST00000411624
  gene symbol: WNK2
  hgvsc: ENST00000411624.1:c.*1355G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1163G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1163G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1163G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1163G>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15081
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25579
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

9-96081492-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081492
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081492
    reference: chr 9
allele count: 1
allele frequency: 8.326533331112925e-6
allele num: 120098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1157A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1157A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1157A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1157A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1157A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1157A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-36T>C
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1157A>G
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23795
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

9-96081505-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96081505
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96081505
    reference: chr 9
allele count: 1
allele frequency: 8.36456102783726e-6
allele num: 119552
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-49T>C
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-1144A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-1144A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-1144A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-1144A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-1144A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-1144A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-1144A>G
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10421
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7268
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3009
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3598
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-96082608-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082608
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082608
    reference: chr 9
allele count: 1
allele frequency: 8.289124668435012e-6
allele num: 120640
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-41T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-41T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-41T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-41T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-41T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-41T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-41T>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1152A>C
  variant of: http://identifiers.org/hgnc/31116
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

9-96082609-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082609
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082609
    reference: chr 9
allele count: 1
allele frequency: 8.288575028181154e-6
allele num: 120648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-40G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-40G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-40G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-40G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1153C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-40G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-40G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-40G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8414
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3916
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

9-96082610-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082610
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082610
    reference: chr 9
allele count: 3
allele frequency: 2.487479685582568e-5
allele num: 120604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-39C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-39C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-39C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1154G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-39C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-39C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-39C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-39C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8450
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30630
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3666
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3911
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

9-96082611-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082611
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082611
    reference: chr 9
allele count: 4
allele frequency: 3.315100281783524e-5
allele num: 120660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-38G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-38G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-38G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-38G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-38G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-38G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1155C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-38G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8968
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8601
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30634
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3679
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

9-96082617-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082617
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082617
    reference: chr 9
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-32C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1161G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-32C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-32C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-32C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-32C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-32C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-32C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8997
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

9-96082628-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082628
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082628
    reference: chr 9
allele count: 1
allele frequency: 8.273351534706709e-6
allele num: 120870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-21C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-21C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-21C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1172G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-21C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-21C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-21C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-21C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8083
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4129
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

9-96082631-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082631
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082631
    reference: chr 9
allele count: 2
allele frequency: 1.654068180690408e-5
allele num: 120914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-18C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-18C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-18C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-18C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1175G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-18C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-18C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-18C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3736
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

9-96082632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082632
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082632
    reference: chr 9
allele count: 3
allele frequency: 2.480527856327827e-5
allele num: 120942
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-17G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-17G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1176C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-17G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-17G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-17G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-17G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-17G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

9-96082633-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082633
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082633
    reference: chr 9
allele count: 33
allele frequency: 2.728490400674681e-4
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-16C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-16C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-16C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-16C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-16C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-16C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1177G>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-16C>T
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8613
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9009
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3944
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30661
  bin: 9.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

9-96082634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082634
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082634
    reference: chr 9
allele count: 4
allele frequency: 3.306714283352347e-5
allele num: 120966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2061-15G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*619-15G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6629-15G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3019-15G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1178C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4094-15G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2145-15G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5576-15G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

9-96082655-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082655
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082655
    reference: chr 9
allele count: 1
allele frequency: 8.254366559910193e-6
allele num: 121148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5582A>G
  hgvsp: ENSP00000297876.6:p.Glu1861Gly
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2151A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4100A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6635A>G
  hgvsp: ENSP00000378860.2:p.Glu2212Gly
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2067A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1199T>C
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*625A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3025A>G
  hgvsp: ENSP00000390441.1:p.Glu1009Gly
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8714
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2533
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu2212Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

9-96082657-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082657
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082657
    reference: chr 9
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3027A>G
  hgvsp: ENSP00000390441.1:p.Ser1010Gly
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6637A>G
  hgvsp: ENSP00000378860.2:p.Ser2213Gly
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2153A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5584A>G
  hgvsp: ENSP00000297876.6:p.Ser1862Gly
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1201T>C
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2069A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*627A>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4102A>G
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser2213Gly
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

9-96082669-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082669
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082669
    reference: chr 9
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2081G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.5596G>A
  hgvsp: ENSP00000297876.6:p.Asp1866Asn
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2165G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.6649G>A
  hgvsp: ENSP00000378860.2:p.Asp2217Asn
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.3039G>A
  hgvsp: ENSP00000390441.1:p.Asp1014Asn
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4114G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1213C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*639G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8694
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3755
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2477
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp2217Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

9-96082678-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082678
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082678
    reference: chr 9
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2090C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.*4C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2174C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4123C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.*4C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.*4C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1222G>C
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*648C>G
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2474
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

9-96082678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082678
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082678
    reference: chr 9
allele count: 4
allele frequency: 3.301201637396012e-5
allele num: 121168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.*4C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*648C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2090C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.*4C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.*4C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4123C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2174C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1222G>A
  variant of: http://identifiers.org/hgnc/31116
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-96082679-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082679
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082679
    reference: chr 9
allele count: 8
allele frequency: 6.602948216378613e-5
allele num: 121158
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1223C>T
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.*5G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2091G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.*5G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*649G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4124G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.*5G>A
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2175G>A
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8470
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-96082682-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082682
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082682
    reference: chr 9
allele count: 6
allele frequency: 4.951393817359587e-5
allele num: 121178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.*8T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.*8T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1226A>G
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2094T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.*8T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4127T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*652T>C
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2178T>C
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30646
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2475
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

9-96082686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082686
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082686
    reference: chr 9
allele count: 4
allele frequency: 3.301092661671013e-5
allele num: 121172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2182C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.*12C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*656C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2098C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4131C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.*12C>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1230G>A
  variant of: http://identifiers.org/hgnc/31116
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8514
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30644
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

9-96082687-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082687
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082687
    reference: chr 9
allele count: 4
allele frequency: 3.301365114474835e-5
allele num: 121162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2099G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.*13G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.*13G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.*13G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2183G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*657G>T
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1231C>A
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4132G>T
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30646
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3936
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

9-96082689-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082689
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082689
    reference: chr 9
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000297876
  ensembl transcript: ENST00000349097
  gene symbol: WNK2
  hgvsc: ENST00000349097.3:c.*15C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378858
  ensembl transcript: ENST00000395475
  gene symbol: WNK2
  hgvsc: ENST00000395475.2:c.*4134C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000348347
  ensembl transcript: ENST00000356055
  gene symbol: WNK2
  hgvsc: ENST00000356055.3:c.*659C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000467401
  gene symbol: WNK2
  hgvsc: ENST00000467401.1:n.2101C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204352
  ensembl protein: ENSP00000364568
  ensembl transcript: ENST00000375419
  gene symbol: C9orf129
  hgvsc: ENST00000375419.1:c.366-1233G>C
  variant of: http://identifiers.org/hgnc/31116
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.*15C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000390441
  ensembl transcript: ENST00000448251
  gene symbol: WNK2
  hgvsc: ENST00000448251.1:c.*15C>G
  variant of: http://identifiers.org/hgnc/14542
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165238
  ensembl transcript: ENST00000471076
  gene symbol: WNK2
  hgvsc: ENST00000471076.1:n.2185C>G
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

9-96082694-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96082694
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 96082694
    reference: chr 9
allele count: 5
allele frequency: 4.126842635236633e-5
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000165238
  ensembl protein: ENSP00000378860
  ensembl transcript: ENST00000395477
  gene symbol: WNK2
  hgvsc: ENST00000395477.2:c.*20C>G
  variant of: http://identifiers.org/hgnc/14542
canonical: false
consequence: 3' UTR
filter: PASS
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 3271
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5075
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15591
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4617
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.262713e6

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.15e1

FS
type: SiteQuality
SIO_000300: 2.428e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4617
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5075
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15591
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18792
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02124183006536e-4
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.262713e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e0

FS
type: SiteQuality
SIO_000300: 2.428e0

QD
type: SiteQuality
SIO_000300: 1.15e1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6411
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15606
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5075
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18789
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3270
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.042483660130719e-4
allele num: 9792
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592464569650881e-4
allele num: 11572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.492e0

MQRankSum
type: SiteQuality
SIO_000300: -1.219e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 2.262686e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

QD
type: SiteQuality
SIO_000300: 1.218e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5073
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15606
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6409
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4615
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 32
allele frequency: 1.938454082868912e-3
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

DP
type: SiteQuality
SIO_000300: 2.263759e6

QD
type: SiteQuality
SIO_000300: 1.128e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 1.174e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.18e-1

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4618
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5077
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18773
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6412
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 8.180999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.658e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.739e0

QD
type: SiteQuality
SIO_000300: 2.155e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 2.261674e6

GenotypeQuality
all individuals: 15595
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4616
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.215e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e0

VQSLOD
type: SiteQuality
SIO_000300: 4.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

DP
type: SiteQuality
SIO_000300: 2.261408e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18771
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15595
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

DP
type: SiteQuality
SIO_000300: 2.261408e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e0

VQSLOD
type: SiteQuality
SIO_000300: 4.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.215e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

GenotypeQuality
all individuals: 4612
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15646
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5074
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3270
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6414
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

FS
type: SiteQuality
SIO_000300: 5.511e0

MQRankSum
type: SiteQuality
SIO_000300: 2.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.372e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.466e0

QD
type: SiteQuality
SIO_000300: 1.317e1

DP
type: SiteQuality
SIO_000300: 2.261019e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.052e1

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18770
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 5074
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4611
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15629
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.087604507451836e-4
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

FS
type: SiteQuality
SIO_000300: 1.363e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.967e0

QD
type: SiteQuality
SIO_000300: 1.233e1

DP
type: SiteQuality
SIO_000300: 2.261317e6

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5072
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3265
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6396
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18751
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.041649652919559e-4
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.941e1

DP
type: SiteQuality
SIO_000300: 2.259086e6

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: -7.81e-1

QD
type: SiteQuality
SIO_000300: 1.179e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.422e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18748
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4605
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6372
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.801044605871406e-4
allele num: 66628
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.042066571370227e-4
allele num: 9794
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

QD
type: SiteQuality
SIO_000300: 1.313e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 2.257145e6

FS
type: SiteQuality
SIO_000300: 6.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.222e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.32e-1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18748
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4605
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.25e-1

QD
type: SiteQuality
SIO_000300: 1.313e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.222e0

DP
type: SiteQuality
SIO_000300: 2.257145e6

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.32e-1

GenotypeQuality
all individuals: 6356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18732
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4607
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3252
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5068
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15352
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.063e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.26e-1

DP
type: SiteQuality
SIO_000300: 2.254826e6

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5060
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4606
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14995
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18733
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6325
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.435756911460236e-4
allele num: 16422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 1.8823e1

DP
type: SiteQuality
SIO_000300: 2.251651e6

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.616e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3232
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5057
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4600
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6305
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14857
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.094588005850804e-5
allele num: 16408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.755e0

DP
type: SiteQuality
SIO_000300: 2.248556e6

MQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 4.825e0

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.247e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.86e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14579
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4598
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5047
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3885
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18729
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.481086098862845e-4
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.302e0

QD
type: SiteQuality
SIO_000300: 1.058e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.991e0

FS
type: SiteQuality
SIO_000300: 1.3386e1

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.81e-1

DP
type: SiteQuality
SIO_000300: 2.244793e6

GenotypeQuality
all individuals: 6229
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14255
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5030
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4592
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18721
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3216
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503849855630414e-5
allele num: 66496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.846e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

DP
type: SiteQuality
SIO_000300: 2.240414e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.037e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.13e-1

GenotypeQuality
all individuals: 3153
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 946
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3874
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11961
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2464
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5925
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4562
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 25
allele frequency: 2.556237218813906e-3
allele num: 9780
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

DP
type: SiteQuality
SIO_000300: 2.213368e6

MQ
type: SiteQuality
SIO_000300: 6.038e1

VQSLOD
type: SiteQuality
SIO_000300: 6.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.438e1

GenotypeQuality
all individuals: 3071
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11174
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5613
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3873
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18704
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 2
allele frequency: 1.227144434899988e-4
allele num: 16298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.011e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.708e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

DP
type: SiteQuality
SIO_000300: 2.20122e6

QD
type: SiteQuality
SIO_000300: 1.147e1

GenotypeQuality
all individuals: 4815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1855
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1268
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7706
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3852
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5093
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2964
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.222000995520159e-5
allele num: 16072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66182
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.126126126126126e-3
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.695e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.169533e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 4.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

QD
type: SiteQuality
SIO_000300: 1.012e1

GenotypeQuality
all individuals: 2444
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4455
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2915
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4770
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.812601720530109e-4
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.227425582264292e-5
allele num: 16058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510893542441e-5
allele num: 66186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.749e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 2.165121e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 8.15e0

QD
type: SiteQuality
SIO_000300: 1.131e1

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8909
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4852
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7626
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23970
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.025430680885972e-4
allele num: 9752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16058
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

DP
type: SiteQuality
SIO_000300: 1.963361e6

FS
type: SiteQuality
SIO_000300: 1.351e0

VQSLOD
type: SiteQuality
SIO_000300: 9.360000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.658e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 25792
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8939
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4718
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7587
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.321262766945218e-4
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.01e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

DP
type: SiteQuality
SIO_000300: 1.970241e6

FS
type: SiteQuality
SIO_000300: 1.783e0

VQSLOD
type: SiteQuality
SIO_000300: 6.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8949
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4709
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25979
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7586
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 313
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3428
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.049180327868852e-4
allele num: 9760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.550000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.286e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

QD
type: SiteQuality
SIO_000300: 1.665e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 1.97135e6

GenotypeQuality
all individuals: 135
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7581
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.68e-1

DP
type: SiteQuality
SIO_000300: 1.981597e6

FS
type: SiteQuality
SIO_000300: 3.655e0

VQSLOD
type: SiteQuality
SIO_000300: 6.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.175e0

QD
type: SiteQuality
SIO_000300: 1.222e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.555e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7578
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9016
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3408
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4677
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.023331968890708e-4
allele num: 9772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.089e0

QD
type: SiteQuality
SIO_000300: 1.329e1

DP
type: SiteQuality
SIO_000300: 1.984979e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4676
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9025
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7576
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 150
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503036132988637e-5
allele num: 66532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.988541e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.124e1

VQSLOD
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

GenotypeQuality
all individuals: 1417
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9061
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4679
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7576
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28272
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502403846153846e-5
allele num: 66560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.98e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 1.717e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.990545e6

MQRankSum
type: SiteQuality
SIO_000300: -1.852e0

QD
type: SiteQuality
SIO_000300: 1.121e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.903e0

GenotypeQuality
all individuals: 7578
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9061
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4676
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28360
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501817198810561e-5
allele num: 66586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.56e-1

DP
type: SiteQuality
SIO_000300: 1.992039e6

VQSLOD
type: SiteQuality
SIO_000300: -2.013e0

MQ
type: SiteQuality
SIO_000300: 5.787e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

FS
type: SiteQuality
SIO_000300: 1.377e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.1e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.53e-2

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7581
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1994
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28725
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9107
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319109461966605e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.996097e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.303e0

VQSLOD
type: SiteQuality
SIO_000300: -1.89e0

FS
type: SiteQuality
SIO_000300: 1.3664e1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.156e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

GenotypeQuality
all individuals: 9112
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7580
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28788
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.137e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 1.996804e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.205e1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7583
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3245
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 4.085801838610827e-4
allele num: 9790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.078e1

DP
type: SiteQuality
SIO_000300: 1.997753e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 1.104e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.131e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7578
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3415
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9114
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4666
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.02124183006536e-4
allele num: 9792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.716e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
SIO_000300: 1.123e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.754e1

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

VQSLOD
type: SiteQuality
SIO_000300: -1.987e0

FS
type: SiteQuality
SIO_000300: 1.056e0

DP
type: SiteQuality
SIO_000300: 1.997613e6

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3417
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7577
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.66e-1

DP
type: SiteQuality
SIO_000300: 1.997717e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

QD
type: SiteQuality
SIO_000300: 1.055e1

MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.798e0

FS
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28922
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7577
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9111
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.467e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 1.997554e6

VQSLOD
type: SiteQuality
SIO_000300: -2.35e0

QD
type: SiteQuality
SIO_000300: 9.550000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.186e0

MQRankSum
type: SiteQuality
SIO_000300: -1.797e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
all individuals: 3203
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3379
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7793
bin: 9.75e1
variant carriers: 526

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28879
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9082
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 20
allele frequency: 3.023888720895071e-3
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 464
allele frequency: 6.956104581434397e-3
allele num: 66704
num of homozygotes: 5

African
type: Population
allele count: 14
allele frequency: 1.430322844299142e-3
allele num: 9788
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.333333333333334e-3
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 29
allele frequency: 2.505183137525916e-3
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.63e-1

QD
type: SiteQuality
SIO_000300: 1.187e1

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

FS
type: SiteQuality
SIO_000300: 5.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

DP
type: SiteQuality
SIO_000300: 2.023157e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3402
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4675
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7325
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.954e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.26e-1

DP
type: SiteQuality
SIO_000300: 1.992316e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.817e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

QD
type: SiteQuality
SIO_000300: 1.498e1

MQ
type: SiteQuality
SIO_000300: 5.916e1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29147
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3220
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7334
bin: 9.75e1
variant carriers: 24

Latino
type: Population
allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.148803454687219e-4
allele num: 66692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

QD
type: SiteQuality
SIO_000300: 1.699e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.993256e6

VQSLOD
type: SiteQuality
SIO_000300: 5.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.6e-2

MQ
type: SiteQuality
SIO_000300: 6.007e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.51e-1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3219
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9148
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7330
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.993363e6

QD
type: SiteQuality
SIO_000300: 1.399e1

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7330
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9148
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 21
allele frequency: 2.145484266448713e-3
allele num: 9788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999850007499625e-5
allele num: 66670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.399e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e0

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.993363e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.48e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4667
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7299
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29104
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3402
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3219
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499835018148004e-5
allele num: 66674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

DP
type: SiteQuality
SIO_000300: 1.990931e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.207e0

VQSLOD
type: SiteQuality
SIO_000300: 7.61e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7298
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 276
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3394
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9096
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3216
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729505361466621e-4
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.47e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.986599e6

MQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.83e0

FS
type: SiteQuality
SIO_000300: 3.228e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.28e-1

QD
type: SiteQuality
SIO_000300: 1.327e1

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28473
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9072
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7296
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3215
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 1.765e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.299999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.566e0

DP
type: SiteQuality
SIO_000300: 1.982779e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27793
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4645
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7295
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00507858280494e-5
allele num: 66554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.977183e6

VQSLOD
type: SiteQuality
SIO_000300: -1.291e-1

FS
type: SiteQuality
SIO_000300: 1.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

QD
type: SiteQuality
SIO_000300: 9.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.85e0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3315
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25943
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7289
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3190
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

DP
type: SiteQuality
SIO_000300: 1.953499e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.52e-1

QD
type: SiteQuality
SIO_000300: 3.41e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.139e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25579
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4586
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7282
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 199
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.024170421958214e-4
allele num: 9764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.947859e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 4.894e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.278e0

QD
type: SiteQuality
SIO_000300: 9.35e0

GenotypeQuality
all individuals: 7282
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 230
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4586
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.278e0

FS
type: SiteQuality
SIO_000300: 4.894e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 9.35e0

DP
type: SiteQuality
SIO_000300: 1.947859e6

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
all individuals: 2787
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7277
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3052
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1724
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7282
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.153088850603002e-5
allele num: 16252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

DP
type: SiteQuality
SIO_000300: 1.896605e6

QD
type: SiteQuality
SIO_000300: 1.613e1

GenotypeQuality
all individuals: 1925
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4971
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4026
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6134
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11961
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2610
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511076188461422e-5
allele num: 66178
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.74e1

DP
type: SiteQuality
SIO_000300: 1.816554e6

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.875e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.092e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.74e-1

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3682
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3917
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3913
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3937
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30635
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.064e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.372000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.57e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.611e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.460955e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.656e0

GenotypeQuality
all individuals: 6786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3684
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3913
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2465
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30636
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3943
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508705229172324e-5
allele num: 66282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.029e0

VQSLOD
type: SiteQuality
SIO_000300: -1.451e0

DP
type: SiteQuality
SIO_000300: 2.461886e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.723e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.89e0

QD
type: SiteQuality
SIO_000300: 1.656e1

GenotypeQuality
all individuals: 539
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2434
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3922
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3905
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6656
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.528301886792453e-5
allele num: 66250
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.139e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.357e0

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

DP
type: SiteQuality
SIO_000300: 2.463322e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2465
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3913
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3955
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016409266409266e-5
allele num: 66304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.752291788570315e-5
allele num: 10254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.339e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

DP
type: SiteQuality
SIO_000300: 2.46523e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3930
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7426
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4013
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30647
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.373e0

FS
type: SiteQuality
SIO_000300: 1.1475e1

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.572e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.471271e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3936
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3730
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30648
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3938
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505525277769414e-5
allele num: 66422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.307e0

FS
type: SiteQuality
SIO_000300: 1.7098e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.534e1

MQ
type: SiteQuality
SIO_000300: 5.919e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.977e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

DP
type: SiteQuality
SIO_000300: 2.479938e6

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30649
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3937
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4145
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21256214380987e-4
allele num: 16494
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.045e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.358e0

VQSLOD
type: SiteQuality
SIO_000300: -3.8e-1

FS
type: SiteQuality
SIO_000300: 8.826000000000001e0

DP
type: SiteQuality
SIO_000300: 2.482277e6

QD
type: SiteQuality
SIO_000300: 1.085e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
all individuals: 30651
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3944
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3937
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4158
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.597852441981296e-4
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.803e0

DP
type: SiteQuality
SIO_000300: 2.482791e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4158
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8375
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.940240589833139e-4
allele num: 10308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 4.513721714010592e-4
allele num: 66464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.932e1

DP
type: SiteQuality
SIO_000300: 2.484135e6

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.334e0

QD
type: SiteQuality
SIO_000300: 1.216e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.73e-1

GenotypeQuality
all individuals: 3936
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30647
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3742
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8452
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3942
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.597402597402597e-4
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504483360414034e-5
allele num: 66468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

VQSLOD
type: SiteQuality
SIO_000300: 4.53e0

MQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

DP
type: SiteQuality
SIO_000300: 2.48438e6

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30647
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 199
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502313562886846e-5
allele num: 66564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.489055e6

QD
type: SiteQuality
SIO_000300: 9.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 2.629e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-2

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3762
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4231
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30647
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3953
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.320000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e-1

FS
type: SiteQuality
SIO_000300: 8.179999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.247e1

MQ
type: SiteQuality
SIO_000300: 5.912e1

DP
type: SiteQuality
SIO_000300: 2.489293e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3936
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30647
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8629
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3947
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.488961e6

FS
type: SiteQuality
SIO_000300: 3.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.965e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.68e-1

QD
type: SiteQuality
SIO_000300: 1.458e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
type: SiteQuality
SIO_000300: 2.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4176
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3749
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30645
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.017e1

FS
type: SiteQuality
SIO_000300: 2.525e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
type: SiteQuality
SIO_000300: -9.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 2.488792e6

GenotypeQuality
all individuals: 3941
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30645
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4176
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003453972067878e-5
allele num: 66590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.7e-2

MQ
type: SiteQuality
SIO_000300: 5.938e1

FS
type: SiteQuality
SIO_000300: 2.525e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

QD
type: SiteQuality
SIO_000300: 1.017e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

DP
type: SiteQuality
SIO_000300: 2.488792e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.25e-1

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4186
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30646
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.932740626207963e-4
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.78168362627197e-4
allele num: 8648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.537e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.53e-1

QD
type: SiteQuality
SIO_000300: 1.162e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

DP
type: SiteQuality
SIO_000300: 2.48864e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.327e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
all individuals: 230
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3746
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8574
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028834504482675e-4
allele num: 16508
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.26e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

FS
type: SiteQuality
SIO_000300: 1.433e0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

DP
type: SiteQuality
SIO_000300: 2.488053e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.75e-1

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4183
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3936
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002912825440678e-5
allele num: 66602
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.487222e6

FS
type: SiteQuality
SIO_000300: 3.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
all individuals: 2506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4175
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8499
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.006366748753679e-5
allele num: 66596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.876e0

MQRankSum
type: SiteQuality
SIO_000300: -5.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

QD
type: SiteQuality
SIO_000300: 1.027e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.014e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

DP
type: SiteQuality
SIO_000300: 2.4872e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

GenotypeQuality
all individuals: 260
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30642
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3732
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3938
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4171
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.651e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.574e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

DP
type: SiteQuality
SIO_000300: 2.486691e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
type: SiteQuality
SIO_000300: 1.103e1

VQSLOD
type: SiteQuality
SIO_000300: 9.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1