6-155574091-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574091
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574091
    reference: chr 6
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4201T>C
  hgvsp: ENSP00000353528.4:p.Ser1401Pro
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.39T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2257T>C
  hgvsp: ENSP00000356142.2:p.Ser753Pro
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2065T>C
  hgvsp: ENSP00000407183.2:p.Ser689Pro
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.904T>C
  hgvsp: ENSP00000275246.7:p.Ser302Pro
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4216T>C
  hgvsp: ENSP00000407746.1:p.Ser1406Pro
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4129T>C
  hgvsp: ENSP00000437188.2:p.Ser1377Pro
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4129T>C
  hgvsp: ENSP00000327315.5:p.Ser1377Pro
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2137T>C
  hgvsp: ENSP00000435335.2:p.Ser713Pro
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4216T>C
  hgvsp: ENSP00000433348.2:p.Ser1406Pro
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser1377Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

6-155574094-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574094
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574094
    reference: chr 6
allele count: 146
allele frequency: 1.205038049489097e-3
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.907C>T
  hgvsp: ENSP00000275246.7:p.Arg303Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4132C>T
  hgvsp: ENSP00000437188.2:p.Arg1378Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2140C>T
  hgvsp: ENSP00000435335.2:p.Arg714Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4132C>T
  hgvsp: ENSP00000327315.5:p.Arg1378Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4204C>T
  hgvsp: ENSP00000353528.4:p.Arg1402Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2260C>T
  hgvsp: ENSP00000356142.2:p.Arg754Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.42C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2068C>T
  hgvsp: ENSP00000407183.2:p.Arg690Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4219C>T
  hgvsp: ENSP00000433348.2:p.Arg1407Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4219C>T
  hgvsp: ENSP00000407746.1:p.Arg1407Trp
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9898
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 20238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 18613
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg1378Trp
num of homozygotes: 3
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

6-155574095-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574095
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574095
    reference: chr 6
allele count: 5
allele frequency: 4.125889129107322e-5
allele num: 121186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4220G>A
  hgvsp: ENSP00000407746.1:p.Arg1407Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2261G>A
  hgvsp: ENSP00000356142.2:p.Arg754Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4133G>A
  hgvsp: ENSP00000437188.2:p.Arg1378Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4220G>A
  hgvsp: ENSP00000433348.2:p.Arg1407Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2069G>A
  hgvsp: ENSP00000407183.2:p.Arg690Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2141G>A
  hgvsp: ENSP00000435335.2:p.Arg714Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.908G>A
  hgvsp: ENSP00000275246.7:p.Arg303Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.43G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4133G>A
  hgvsp: ENSP00000327315.5:p.Arg1378Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4205G>A
  hgvsp: ENSP00000353528.4:p.Arg1402Gln
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg1378Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

6-155574096-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574096
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574096
    reference: chr 6
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4134G>T
  hgvsp: ENST00000461783.3:c.4134G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4134G>T
  hgvsp: ENST00000318981.5:c.4134G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.44G>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2262G>T
  hgvsp: ENST00000367174.2:c.2262G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4206G>T
  hgvsp: ENST00000360366.4:c.4206G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.909G>T
  hgvsp: ENST00000275246.7:c.909G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2070G>T
  hgvsp: ENST00000456877.2:c.2070G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4221G>T
  hgvsp: ENST00000456144.1:c.4221G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4221G>T
  hgvsp: ENST00000529824.2:c.4221G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2142G>T
  hgvsp: ENST00000528391.2:c.2142G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18715
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg1378Arg
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

6-155574099-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574099
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574099
    reference: chr 6
allele count: 2
allele frequency: 1.649729444371123e-5
allele num: 121232
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4137T>C
  hgvsp: ENST00000318981.5:c.4137T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4224T>C
  hgvsp: ENST00000529824.2:c.4224T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2073T>C
  hgvsp: ENST00000456877.2:c.2073T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.912T>C
  hgvsp: ENST00000275246.7:c.912T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.47T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4209T>C
  hgvsp: ENST00000360366.4:c.4209T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2265T>C
  hgvsp: ENST00000367174.2:c.2265T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2145T>C
  hgvsp: ENST00000528391.2:c.2145T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4137T>C
  hgvsp: ENST00000461783.3:c.4137T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4224T>C
  hgvsp: ENST00000456144.1:c.4224T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro1379Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-155574102-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574102
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574102
    reference: chr 6
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4212A>C
  hgvsp: ENST00000360366.4:c.4212A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4227A>C
  hgvsp: ENST00000456144.1:c.4227A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.915A>C
  hgvsp: ENST00000275246.7:c.915A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2076A>C
  hgvsp: ENST00000456877.2:c.2076A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2268A>C
  hgvsp: ENST00000367174.2:c.2268A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4140A>C
  hgvsp: ENST00000318981.5:c.4140A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4227A>C
  hgvsp: ENST00000529824.2:c.4227A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2148A>C
  hgvsp: ENST00000528391.2:c.2148A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4140A>C
  hgvsp: ENST00000461783.3:c.4140A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala1380Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

6-155574105-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574105
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574105
    reference: chr 6
allele count: 7
allele frequency: 5.772148558612046e-5
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4143C>T
  hgvsp: ENST00000318981.5:c.4143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4215C>T
  hgvsp: ENST00000360366.4:c.4215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2271C>T
  hgvsp: ENST00000367174.2:c.2271C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.53C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4143C>T
  hgvsp: ENST00000461783.3:c.4143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2079C>T
  hgvsp: ENST00000456877.2:c.2079C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2151C>T
  hgvsp: ENST00000528391.2:c.2151C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4230C>T
  hgvsp: ENST00000456144.1:c.4230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.918C>T
  hgvsp: ENST00000275246.7:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4230C>T
  hgvsp: ENST00000529824.2:c.4230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His1381His
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/6-155574107-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574107
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574107
    reference: chr 6
allele count: 45
allele frequency: 3.71042216358839e-4
allele num: 121280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2153A>C
  hgvsp: ENSP00000435335.2:p.Asn718Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4232A>C
  hgvsp: ENSP00000433348.2:p.Asn1411Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.55A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4232A>C
  hgvsp: ENSP00000407746.1:p.Asn1411Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4217A>C
  hgvsp: ENSP00000353528.4:p.Asn1406Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2273A>C
  hgvsp: ENSP00000356142.2:p.Asn758Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2081A>C
  hgvsp: ENSP00000407183.2:p.Asn694Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4145A>C
  hgvsp: ENSP00000327315.5:p.Asn1382Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.920A>C
  hgvsp: ENSP00000275246.7:p.Asn307Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4145A>C
  hgvsp: ENSP00000437188.2:p.Asn1382Thr
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20215
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn1382Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

6-155574108-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574108
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574108
    reference: chr 6
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4233C>T
  hgvsp: ENST00000529824.2:c.4233C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2082C>T
  hgvsp: ENST00000456877.2:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2274C>T
  hgvsp: ENST00000367174.2:c.2274C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4146C>T
  hgvsp: ENST00000461783.3:c.4146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2154C>T
  hgvsp: ENST00000528391.2:c.2154C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.56C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4233C>T
  hgvsp: ENST00000456144.1:c.4233C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4146C>T
  hgvsp: ENST00000318981.5:c.4146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4218C>T
  hgvsp: ENST00000360366.4:c.4218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.921C>T
  hgvsp: ENST00000275246.7:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn1382Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

6-155574111-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574111
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574111
    reference: chr 6
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2157T>C
  hgvsp: ENST00000528391.2:c.2157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2277T>C
  hgvsp: ENST00000367174.2:c.2277T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4236T>C
  hgvsp: ENST00000529824.2:c.4236T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4221T>C
  hgvsp: ENST00000360366.4:c.4221T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.59T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4149T>C
  hgvsp: ENST00000461783.3:c.4149T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.924T>C
  hgvsp: ENST00000275246.7:c.924T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4149T>C
  hgvsp: ENST00000318981.5:c.4149T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4236T>C
  hgvsp: ENST00000456144.1:c.4236T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2085T>C
  hgvsp: ENST00000456877.2:c.2085T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8377
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser1383Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

6-155574112-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574112
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574112
    reference: chr 6
allele count: 2
allele frequency: 1.648913366091746e-5
allele num: 121292
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4150A>G
  hgvsp: ENSP00000437188.2:p.Thr1384Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4222A>G
  hgvsp: ENSP00000353528.4:p.Thr1408Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2278A>G
  hgvsp: ENSP00000356142.2:p.Thr760Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4237A>G
  hgvsp: ENSP00000407746.1:p.Thr1413Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.60A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2086A>G
  hgvsp: ENSP00000407183.2:p.Thr696Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2158A>G
  hgvsp: ENSP00000435335.2:p.Thr720Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4150A>G
  hgvsp: ENSP00000327315.5:p.Thr1384Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.925A>G
  hgvsp: ENSP00000275246.7:p.Thr309Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4237A>G
  hgvsp: ENSP00000433348.2:p.Thr1413Ala
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8382
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr1384Ala
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

6-155574115-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574115
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574115
    reference: chr 6
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4153G>A
  hgvsp: ENSP00000437188.2:p.Asp1385Asn
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4240G>A
  hgvsp: ENSP00000433348.2:p.Asp1414Asn
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4153G>A
  hgvsp: ENSP00000327315.5:p.Asp1385Asn
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4225G>A
  hgvsp: ENSP00000353528.4:p.Asp1409Asn
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2089G>A
  hgvsp: ENSP00000407183.2:p.Asp697Asn
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.928G>A
  hgvsp: ENSP00000275246.7:p.Asp310Asn
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2161G>A
  hgvsp: ENSP00000435335.2:p.Asp721Asn
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4240G>A
  hgvsp: ENSP00000407746.1:p.Asp1414Asn
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.63G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2281G>A
  hgvsp: ENSP00000356142.2:p.Asp761Asn
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp1385Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

6-155574124-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574124
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574124
    reference: chr 6
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2098C>G
  hgvsp: ENSP00000407183.2:p.Pro700Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4234C>G
  hgvsp: ENSP00000353528.4:p.Pro1412Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4162C>G
  hgvsp: ENSP00000437188.2:p.Pro1388Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4249C>G
  hgvsp: ENSP00000407746.1:p.Pro1417Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2290C>G
  hgvsp: ENSP00000356142.2:p.Pro764Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.937C>G
  hgvsp: ENSP00000275246.7:p.Pro313Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2170C>G
  hgvsp: ENSP00000435335.2:p.Pro724Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4249C>G
  hgvsp: ENSP00000433348.2:p.Pro1417Ala
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.72C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4162C>G
  hgvsp: ENSP00000327315.5:p.Pro1388Ala
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro1388Ala
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

6-155574136-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574136
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574136
    reference: chr 6
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4261C>T
  hgvsp: ENSP00000407746.1:p.Arg1421Cys
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2110C>T
  hgvsp: ENSP00000407183.2:p.Arg704Cys
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2182C>T
  hgvsp: ENSP00000435335.2:p.Arg728Cys
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.949C>T
  hgvsp: ENSP00000275246.7:p.Arg317Cys
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2302C>T
  hgvsp: ENSP00000356142.2:p.Arg768Cys
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4174C>T
  hgvsp: ENSP00000437188.2:p.Arg1392Cys
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4261C>T
  hgvsp: ENSP00000433348.2:p.Arg1421Cys
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4246C>T
  hgvsp: ENSP00000353528.4:p.Arg1416Cys
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.84C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4174C>T
  hgvsp: ENSP00000327315.5:p.Arg1392Cys
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg1392Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

6-155574137-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574137
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574137
    reference: chr 6
allele count: 2
allele frequency: 1.648940555692967e-5
allele num: 121290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2111G>A
  hgvsp: ENSP00000407183.2:p.Arg704His
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.85G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4262G>A
  hgvsp: ENSP00000407746.1:p.Arg1421His
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4175G>A
  hgvsp: ENSP00000327315.5:p.Arg1392His
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4247G>A
  hgvsp: ENSP00000353528.4:p.Arg1416His
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.950G>A
  hgvsp: ENSP00000275246.7:p.Arg317His
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2303G>A
  hgvsp: ENSP00000356142.2:p.Arg768His
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4175G>A
  hgvsp: ENSP00000437188.2:p.Arg1392His
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2183G>A
  hgvsp: ENSP00000435335.2:p.Arg728His
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4262G>A
  hgvsp: ENSP00000433348.2:p.Arg1421His
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg1392His
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

6-155574154-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574154
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574154
    reference: chr 6
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4192T>A
  hgvsp: ENSP00000327315.5:p.Ser1398Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4264T>A
  hgvsp: ENSP00000353528.4:p.Ser1422Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.967T>A
  hgvsp: ENSP00000275246.7:p.Ser323Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4192T>A
  hgvsp: ENSP00000437188.2:p.Ser1398Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.102T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4279T>A
  hgvsp: ENSP00000407746.1:p.Ser1427Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2320T>A
  hgvsp: ENSP00000356142.2:p.Ser774Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2128T>A
  hgvsp: ENSP00000407183.2:p.Ser710Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2200T>A
  hgvsp: ENSP00000435335.2:p.Ser734Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4279T>A
  hgvsp: ENSP00000433348.2:p.Ser1427Thr
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser1398Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

6-155574155-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574155
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574155
    reference: chr 6
allele count: 3
allele frequency: 2.47610558114198e-5
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.968C>T
  hgvsp: ENSP00000275246.7:p.Ser323Phe
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4280C>T
  hgvsp: ENSP00000433348.2:p.Ser1427Phe
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4193C>T
  hgvsp: ENSP00000327315.5:p.Ser1398Phe
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2129C>T
  hgvsp: ENSP00000407183.2:p.Ser710Phe
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2201C>T
  hgvsp: ENSP00000435335.2:p.Ser734Phe
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2321C>T
  hgvsp: ENSP00000356142.2:p.Ser774Phe
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4193C>T
  hgvsp: ENSP00000437188.2:p.Ser1398Phe
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.103C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4280C>T
  hgvsp: ENSP00000407746.1:p.Ser1427Phe
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4265C>T
  hgvsp: ENSP00000353528.4:p.Ser1422Phe
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser1398Phe
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum

6-155574156-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574156
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574156
    reference: chr 6
allele count: 3
allele frequency: 2.47639173215347e-5
allele num: 121144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4281C>T
  hgvsp: ENST00000529824.2:c.4281C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4194C>T
  hgvsp: ENST00000461783.3:c.4194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.969C>T
  hgvsp: ENST00000275246.7:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4266C>T
  hgvsp: ENST00000360366.4:c.4266C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4194C>T
  hgvsp: ENST00000318981.5:c.4194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4281C>T
  hgvsp: ENST00000456144.1:c.4281C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2130C>T
  hgvsp: ENST00000456877.2:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.104C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2202C>T
  hgvsp: ENST00000528391.2:c.2202C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2322C>T
  hgvsp: ENST00000367174.2:c.2322C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18907
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser1398Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

6-155574157-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574157
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574157
    reference: chr 6
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.970G>A
  hgvsp: ENSP00000275246.7:p.Ala324Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2131G>A
  hgvsp: ENSP00000407183.2:p.Ala711Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4282G>A
  hgvsp: ENSP00000433348.2:p.Ala1428Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2203G>A
  hgvsp: ENSP00000435335.2:p.Ala735Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4195G>A
  hgvsp: ENSP00000437188.2:p.Ala1399Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4282G>A
  hgvsp: ENSP00000407746.1:p.Ala1428Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4195G>A
  hgvsp: ENSP00000327315.5:p.Ala1399Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.105G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2323G>A
  hgvsp: ENSP00000356142.2:p.Ala775Thr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4267G>A
  hgvsp: ENSP00000353528.4:p.Ala1423Thr
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala1399Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

6-155574158-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574158
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574158
    reference: chr 6
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2204C>T
  hgvsp: ENSP00000435335.2:p.Ala735Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4196C>T
  hgvsp: ENSP00000437188.2:p.Ala1399Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4283C>T
  hgvsp: ENSP00000433348.2:p.Ala1428Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2324C>T
  hgvsp: ENSP00000356142.2:p.Ala775Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4196C>T
  hgvsp: ENSP00000327315.5:p.Ala1399Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.971C>T
  hgvsp: ENSP00000275246.7:p.Ala324Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.106C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2132C>T
  hgvsp: ENSP00000407183.2:p.Ala711Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4268C>T
  hgvsp: ENSP00000353528.4:p.Ala1423Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4283C>T
  hgvsp: ENSP00000407746.1:p.Ala1428Val
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7238
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala1399Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

6-155574162-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574162
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574162
    reference: chr 6
allele count: 3
allele frequency: 2.478069088566189e-5
allele num: 121062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2136T>G
  hgvsp: ENST00000456877.2:c.2136T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.110T>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4287T>G
  hgvsp: ENST00000456144.1:c.4287T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2208T>G
  hgvsp: ENST00000528391.2:c.2208T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4200T>G
  hgvsp: ENST00000461783.3:c.4200T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4272T>G
  hgvsp: ENST00000360366.4:c.4272T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2328T>G
  hgvsp: ENST00000367174.2:c.2328T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4200T>G
  hgvsp: ENST00000318981.5:c.4200T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.975T>G
  hgvsp: ENST00000275246.7:c.975T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4287T>G
  hgvsp: ENST00000529824.2:c.4287T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3879
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu1400Leu
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

6-155574164-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574164
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574164
    reference: chr 6
allele count: 4
allele frequency: 3.304856486607069e-5
allele num: 121034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2330A>G
  hgvsp: ENSP00000356142.2:p.Gln777Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4289A>G
  hgvsp: ENSP00000433348.2:p.Gln1430Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2210A>G
  hgvsp: ENSP00000435335.2:p.Gln737Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.977A>G
  hgvsp: ENSP00000275246.7:p.Gln326Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4202A>G
  hgvsp: ENSP00000327315.5:p.Gln1401Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4202A>G
  hgvsp: ENSP00000437188.2:p.Gln1401Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4289A>G
  hgvsp: ENSP00000407746.1:p.Gln1430Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2138A>G
  hgvsp: ENSP00000407183.2:p.Gln713Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.112A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4274A>G
  hgvsp: ENSP00000353528.4:p.Gln1425Arg
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7235
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Gln1401Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-155574165-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574165
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574165
    reference: chr 6
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4203A>G
  hgvsp: ENST00000318981.5:c.4203A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.978A>G
  hgvsp: ENST00000275246.7:c.978A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.113A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4290A>G
  hgvsp: ENST00000456144.1:c.4290A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2331A>G
  hgvsp: ENST00000367174.2:c.2331A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2211A>G
  hgvsp: ENST00000528391.2:c.2211A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2139A>G
  hgvsp: ENST00000456877.2:c.2139A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4275A>G
  hgvsp: ENST00000360366.4:c.4275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4290A>G
  hgvsp: ENST00000529824.2:c.4290A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4203A>G
  hgvsp: ENST00000461783.3:c.4203A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8245
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln1401Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

6-155574175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574175
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574175
    reference: chr 6
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4300G>A
  hgvsp: ENSP00000407746.1:p.Gly1434Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4213G>A
  hgvsp: ENSP00000327315.5:p.Gly1405Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.123G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2221G>A
  hgvsp: ENSP00000435335.2:p.Gly741Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.988G>A
  hgvsp: ENSP00000275246.7:p.Gly330Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4285G>A
  hgvsp: ENSP00000353528.4:p.Gly1429Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4213G>A
  hgvsp: ENSP00000437188.2:p.Gly1405Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2149G>A
  hgvsp: ENSP00000407183.2:p.Gly717Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4300G>A
  hgvsp: ENSP00000433348.2:p.Gly1434Arg
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2341G>A
  hgvsp: ENSP00000356142.2:p.Gly781Arg
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly1405Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

6-155574176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574176
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574176
    reference: chr 6
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2150G>A
  hgvsp: ENSP00000407183.2:p.Gly717Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4301G>A
  hgvsp: ENSP00000433348.2:p.Gly1434Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4214G>A
  hgvsp: ENSP00000327315.5:p.Gly1405Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4286G>A
  hgvsp: ENSP00000353528.4:p.Gly1429Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4301G>A
  hgvsp: ENSP00000407746.1:p.Gly1434Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2222G>A
  hgvsp: ENSP00000435335.2:p.Gly741Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2342G>A
  hgvsp: ENSP00000356142.2:p.Gly781Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4214G>A
  hgvsp: ENSP00000437188.2:p.Gly1405Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.989G>A
  hgvsp: ENSP00000275246.7:p.Gly330Glu
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.124G>A
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly1405Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

6-155574181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574181
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574181
    reference: chr 6
allele count: 1
allele frequency: 8.285965232089886e-6
allele num: 120686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4219C>T
  hgvsp: ENSP00000327315.5:p.Pro1407Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2155C>T
  hgvsp: ENSP00000407183.2:p.Pro719Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4306C>T
  hgvsp: ENSP00000407746.1:p.Pro1436Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4291C>T
  hgvsp: ENSP00000353528.4:p.Pro1431Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4219C>T
  hgvsp: ENSP00000437188.2:p.Pro1407Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.129C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2227C>T
  hgvsp: ENSP00000435335.2:p.Pro743Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4306C>T
  hgvsp: ENSP00000433348.2:p.Pro1436Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2347C>T
  hgvsp: ENSP00000356142.2:p.Pro783Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.994C>T
  hgvsp: ENSP00000275246.7:p.Pro332Ser
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro1407Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-155574183-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574183
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574183
    reference: chr 6
allele count: 1
allele frequency: 8.289262089888757e-6
allele num: 120638
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4221A>C
  hgvsp: ENST00000461783.3:c.4221A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4221A>C
  hgvsp: ENST00000318981.5:c.4221A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2229A>C
  hgvsp: ENST00000528391.2:c.2229A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2157A>C
  hgvsp: ENST00000456877.2:c.2157A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4308A>C
  hgvsp: ENST00000456144.1:c.4308A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4293A>C
  hgvsp: ENST00000360366.4:c.4293A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2349A>C
  hgvsp: ENST00000367174.2:c.2349A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.131A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.996A>C
  hgvsp: ENST00000275246.7:c.996A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4308A>C
  hgvsp: ENST00000529824.2:c.4308A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro1407Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

6-155574183-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574183
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574183
    reference: chr 6
allele count: 1
allele frequency: 8.289262089888757e-6
allele num: 120638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2349A>G
  hgvsp: ENST00000367174.2:c.2349A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4221A>G
  hgvsp: ENST00000318981.5:c.4221A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2229A>G
  hgvsp: ENST00000528391.2:c.2229A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2157A>G
  hgvsp: ENST00000456877.2:c.2157A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.996A>G
  hgvsp: ENST00000275246.7:c.996A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.131A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4308A>G
  hgvsp: ENST00000456144.1:c.4308A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4308A>G
  hgvsp: ENST00000529824.2:c.4308A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4221A>G
  hgvsp: ENST00000461783.3:c.4221A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4293A>G
  hgvsp: ENST00000360366.4:c.4293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro1407Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

6-155574184-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574184
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574184
    reference: chr 6
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4222G>T
  hgvsp: ENSP00000327315.5:p.Ala1408Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4222G>T
  hgvsp: ENSP00000437188.2:p.Ala1408Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4309G>T
  hgvsp: ENSP00000433348.2:p.Ala1437Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.132G>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2158G>T
  hgvsp: ENSP00000407183.2:p.Ala720Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2230G>T
  hgvsp: ENSP00000435335.2:p.Ala744Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2350G>T
  hgvsp: ENSP00000356142.2:p.Ala784Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.997G>T
  hgvsp: ENSP00000275246.7:p.Ala333Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4309G>T
  hgvsp: ENSP00000407746.1:p.Ala1437Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4294G>T
  hgvsp: ENSP00000353528.4:p.Ala1432Ser
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9754
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3770
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala1408Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

6-155574198-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574198
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574198
    reference: chr 6
allele count: 40054
allele frequency: 3.366957515845396e-1
allele num: 118962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+11C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+11C>T
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 1.25e1
  variant carriers: 793
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.5e0
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 9542
  bin: 3.25e1
  variant carriers: 5354
genotype depth: GenotypeDepth
  all individuals: 5571
  bin: 3.75e1
  variant carriers: 3818
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 1.75e1
  variant carriers: 2644
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 9.75e1
  variant carriers: 649
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 6.25e1
  variant carriers: 770
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 5.75e1
  variant carriers: 928
genotype depth: GenotypeDepth
  all individuals: 13378
  bin: 2.75e1
  variant carriers: 5754
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 278
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 445
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 568
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 4.25e1
  variant carriers: 2464
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 5.25e1
  variant carriers: 1193
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 4.75e1
  variant carriers: 1618
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 343
genotype depth: GenotypeDepth
  all individuals: 10998
  bin: 2.25e1
  variant carriers: 4613
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 3.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 2.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 2.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 5.25e1
  variant carriers: 266
num of homozygotes: 7685
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

6-155574201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574201
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574201
    reference: chr 6
allele count: 6
allele frequency: 5.045154129458655e-5
allele num: 118926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+14G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+14G>A
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8400
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12375
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2919
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3464
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

6-155574203-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574203
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574203
    reference: chr 6
allele count: 1
allele frequency: 8.405339071378139e-6
allele num: 118972
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+16A>G
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13484
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14810
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

6-155574207-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574207
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574207
    reference: chr 6
allele count: 79403
allele frequency: 6.742552902415e-1
allele num: 117764
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+20T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+20T>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 1.75e1
  variant carriers: 7036
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.25e1
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.75e1
  variant carriers: 575
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 7.5e0
  variant carriers: 396
genotype depth: GenotypeDepth
  all individuals: 11447
  bin: 2.25e1
  variant carriers: 10156
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 3.25e1
  variant carriers: 6878
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 3.75e1
  variant carriers: 4348
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 1.25e1
  variant carriers: 2864
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.75e1
  variant carriers: 315
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 247
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 4.25e1
  variant carriers: 2771
genotype depth: GenotypeDepth
  all individuals: 12135
  bin: 2.75e1
  variant carriers: 9889
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 9.75e1
  variant carriers: 757
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 4.75e1
  variant carriers: 1955
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 5.75e1
  variant carriers: 1126
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 6.25e1
  variant carriers: 828
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 5.25e1
  variant carriers: 1507
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 3.75e1
  variant carriers: 531
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 1207
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.5e0
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 7.75e1
  variant carriers: 2019
num of homozygotes: 27789
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

6-155574208-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574208
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574208
    reference: chr 6
allele count: 2
allele frequency: 1.850344164014507e-5
allele num: 108088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+21G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+21G>A
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17416
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

6-155574209-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574209
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574209
    reference: chr 6
allele count: 2
allele frequency: 1.858425170510509e-5
allele num: 107618
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+22A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+22A>G
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4218
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

6-155574211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574211
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574211
    reference: chr 6
allele count: 2
allele frequency: 1.878816345702208e-5
allele num: 106450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+24G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+24G>A
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-155574223-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574223
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574223
    reference: chr 6
allele count: 1
allele frequency: 9.811616954474098e-6
allele num: 101920
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+36A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+36A>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5326
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17930
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

6-155574224-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155574224
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155574224
    reference: chr 6
allele count: 2
allele frequency: 1.961245783321566e-5
allele num: 101976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2161+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2353+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1000+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4312+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.135+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2233+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4225+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4297+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4312+37T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4225+37T>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5633
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/6-155575057-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575057
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575057
    reference: chr 6
allele count: 1
allele frequency: 9.265951335223587e-6
allele num: 107922
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-50A>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-159T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-50A>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16086
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11558
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

6-155575062-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575062
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575062
    reference: chr 6
allele count: 2
allele frequency: 1.850481125092524e-5
allele num: 108080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-164A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-45T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-45T>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5267
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13070
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15488
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6314
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

6-155575069-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575069
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575069
    reference: chr 6
allele count: 1
allele frequency: 9.195740532985121e-6
allele num: 108746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-171T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-38A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-38A>T
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19281
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6478
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

6-155575072-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575072
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575072
    reference: chr 6
allele count: 4
allele frequency: 3.676200279391221e-5
allele num: 108808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-174C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-35G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-35G>A
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6331
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13276
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6477
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24281
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

6-155575073-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575073
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575073
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 109016
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-175A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-34T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-34T>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5324
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

6-155575074-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575074
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575074
    reference: chr 6
allele count: 18
allele frequency: 1.64847241556158e-4
allele num: 109192
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-176A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-33T>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-33T>A
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23086
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12635
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6578
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6028
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

6-155575078-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575078
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575078
    reference: chr 6
allele count: 1
allele frequency: 9.116268893467282e-6
allele num: 109694
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-180C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-29G>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-29G>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6217
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/6-155575080-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575080
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575080
    reference: chr 6
allele count: 1
allele frequency: 9.08909127265456e-6
allele num: 110022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-182G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-27C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-27C>A
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

6-155575082-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575082
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575080
    reference: chr 6
allele count: 1
allele frequency: 9.047153765425397e-6
allele num: 110532
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-24_4298-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-24_4226-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-24_2354-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-24_1001-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-186_2463-185delAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-24_4313-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-24_4313-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-24_2234-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-24_4226-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-24_2162-23delTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-24_136-23delTT
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29501
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: CTT
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

6-155575084-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575084
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575084
    reference: chr 6
allele count: 1
allele frequency: 9.000576036866359e-6
allele num: 111104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-186A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-23T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-23T>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-155575089-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575089
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575089
    reference: chr 6
allele count: 1
allele frequency: 8.883834973881526e-6
allele num: 112564
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-191G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-18C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-18C>G
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8914
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

6-155575091-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575091
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575091
    reference: chr 6
allele count: 1
allele frequency: 8.813678829543451e-6
allele num: 113460
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-193T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-16A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-16A>G
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-155575095-C-CCTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575095
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575098
    reference: chr 6
allele count: 1
allele frequency: 8.722502311463112e-6
allele num: 114646
alternate allele: CCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-11_4313-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-11_4313-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-11_2162-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-11_136-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-11_2234-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-11_4226-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-11_4298-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-11_1001-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-11_4226-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-200_2463-198dupAAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-11_2354-9dupCTT
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

6-155575098-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575098
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575098
    reference: chr 6
allele count: 1
allele frequency: 8.653513326410523e-6
allele num: 115560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-200A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-9T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-9T>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36915
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

6-155575101-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575101
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575101
    reference: chr 6
allele count: 1
allele frequency: 8.593280054996992e-6
allele num: 116370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-203T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-6A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-6A>G
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10411
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.4226-6A>G
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

6-155575104-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575104
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575104
    reference: chr 6
allele count: 14
allele frequency: 1.194192810959278e-4
allele num: 117234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-206A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-3T>C
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-3T>C
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38505
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.4226-3T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

6-155575106-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575106
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575106
    reference: chr 6
allele count: 1
allele frequency: 8.501955449753444e-6
allele num: 117620
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4226-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4313-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-208C>T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1001-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2162-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2234-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4313-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4226-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4298-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2354-1G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.136-1G>A
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38597
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
hgvs: c.4226-1G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

6-155575108-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575108
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575108
    reference: chr 6
allele count: 2
allele frequency: 1.695030171537053e-5
allele num: 117992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4314G>T
  hgvsp: ENST00000529824.2:c.4314G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4299G>T
  hgvsp: ENST00000360366.4:c.4299G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4227G>T
  hgvsp: ENST00000461783.3:c.4227G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2235G>T
  hgvsp: ENST00000528391.2:c.2235G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4314G>T
  hgvsp: ENST00000456144.1:c.4314G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.137G>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2355G>T
  hgvsp: ENST00000367174.2:c.2355G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4227G>T
  hgvsp: ENST00000318981.5:c.4227G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-210C>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1002G>T
  hgvsp: ENST00000275246.7:c.1002G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2163G>T
  hgvsp: ENST00000456877.2:c.2163G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.4227G>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

6-155575109-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575109
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575109
    reference: chr 6
allele count: 2
allele frequency: 1.693050029628376e-5
allele num: 118130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4315A>T
  hgvsp: ENSP00000433348.2:p.Thr1439Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2236A>T
  hgvsp: ENSP00000435335.2:p.Thr746Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1003A>T
  hgvsp: ENSP00000275246.7:p.Thr335Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2356A>T
  hgvsp: ENSP00000356142.2:p.Thr786Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4315A>T
  hgvsp: ENSP00000407746.1:p.Thr1439Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2164A>T
  hgvsp: ENSP00000407183.2:p.Thr722Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4228A>T
  hgvsp: ENSP00000437188.2:p.Thr1410Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-211T>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4228A>T
  hgvsp: ENSP00000327315.5:p.Thr1410Ser
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.138A>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4300A>T
  hgvsp: ENSP00000353528.4:p.Thr1434Ser
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr1410Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

6-155575110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575110
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575110
    reference: chr 6
allele count: 1
allele frequency: 8.452370890034655e-6
allele num: 118310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1004C>T
  hgvsp: ENSP00000275246.7:p.Thr335Ile
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2165C>T
  hgvsp: ENSP00000407183.2:p.Thr722Ile
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.139C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4229C>T
  hgvsp: ENSP00000327315.5:p.Thr1410Ile
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4316C>T
  hgvsp: ENSP00000433348.2:p.Thr1439Ile
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2357C>T
  hgvsp: ENSP00000356142.2:p.Thr786Ile
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4301C>T
  hgvsp: ENSP00000353528.4:p.Thr1434Ile
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4229C>T
  hgvsp: ENSP00000437188.2:p.Thr1410Ile
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-212G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2237C>T
  hgvsp: ENSP00000435335.2:p.Thr746Ile
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4316C>T
  hgvsp: ENSP00000407746.1:p.Thr1439Ile
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr1410Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/6-155575122-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575122
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575122
    reference: chr 6
allele count: 1
allele frequency: 8.368621018628551e-6
allele num: 119494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2177C>A
  hgvsp: ENSP00000407183.2:p.Ser726Tyr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-224G>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4241C>A
  hgvsp: ENSP00000437188.2:p.Ser1414Tyr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4328C>A
  hgvsp: ENSP00000407746.1:p.Ser1443Tyr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.151C>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4241C>A
  hgvsp: ENSP00000327315.5:p.Ser1414Tyr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2249C>A
  hgvsp: ENSP00000435335.2:p.Ser750Tyr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2369C>A
  hgvsp: ENSP00000356142.2:p.Ser790Tyr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4313C>A
  hgvsp: ENSP00000353528.4:p.Ser1438Tyr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1016C>A
  hgvsp: ENSP00000275246.7:p.Ser339Tyr
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4328C>A
  hgvsp: ENSP00000433348.2:p.Ser1443Tyr
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1414Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-155575124-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575124
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575124
    reference: chr 6
allele count: 8
allele frequency: 6.682258603407952e-5
allele num: 119720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2371A>G
  hgvsp: ENSP00000356142.2:p.Ile791Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-226T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4315A>G
  hgvsp: ENSP00000353528.4:p.Ile1439Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4243A>G
  hgvsp: ENSP00000327315.5:p.Ile1415Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2251A>G
  hgvsp: ENSP00000435335.2:p.Ile751Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2179A>G
  hgvsp: ENSP00000407183.2:p.Ile727Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4330A>G
  hgvsp: ENSP00000407746.1:p.Ile1444Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4243A>G
  hgvsp: ENSP00000437188.2:p.Ile1415Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1018A>G
  hgvsp: ENSP00000275246.7:p.Ile340Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4330A>G
  hgvsp: ENSP00000433348.2:p.Ile1444Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.153A>G
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12144
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile1415Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

6-155575143-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575143
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575143
    reference: chr 6
allele count: 52
allele frequency: 4.316355667707019e-4
allele num: 120472
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4262C>T
  hgvsp: ENSP00000437188.2:p.Thr1421Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-245G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4262C>T
  hgvsp: ENSP00000327315.5:p.Thr1421Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2198C>T
  hgvsp: ENSP00000407183.2:p.Thr733Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4334C>T
  hgvsp: ENSP00000353528.4:p.Thr1445Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2270C>T
  hgvsp: ENSP00000435335.2:p.Thr757Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1037C>T
  hgvsp: ENSP00000275246.7:p.Thr346Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4349C>T
  hgvsp: ENSP00000407746.1:p.Thr1450Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4349C>T
  hgvsp: ENSP00000433348.2:p.Thr1450Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2390C>T
  hgvsp: ENSP00000356142.2:p.Thr797Met
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.172C>T
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12658
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Thr1421Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

6-155575144-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575144
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575144
    reference: chr 6
allele count: 1
allele frequency: 8.298755186721992e-6
allele num: 120500
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2463-246C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1038G>A
  hgvsp: ENST00000275246.7:c.1038G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4263G>A
  hgvsp: ENST00000318981.5:c.4263G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.173G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2271G>A
  hgvsp: ENST00000528391.2:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2391G>A
  hgvsp: ENST00000367174.2:c.2391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4263G>A
  hgvsp: ENST00000461783.3:c.4263G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4350G>A
  hgvsp: ENST00000456144.1:c.4350G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4335G>A
  hgvsp: ENST00000360366.4:c.4335G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2199G>A
  hgvsp: ENST00000456877.2:c.2199G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4350G>A
  hgvsp: ENST00000529824.2:c.4350G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr1421Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

6-155575155-TAGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575155
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575152
    reference: chr 6
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2405_2407delAAG
  hgvsp: ENSP00000356142.2:p.Glu802del
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4349_4351delAAG
  hgvsp: ENSP00000353528.4:p.Glu1450del
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2285_2287delAAG
  hgvsp: ENSP00000435335.2:p.Glu762del
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4364_4366delAAG
  hgvsp: ENSP00000433348.2:p.Glu1455del
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4277_4279delAAG
  hgvsp: ENSP00000327315.5:p.Glu1426del
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1052_1054delAAG
  hgvsp: ENSP00000275246.7:p.Glu351del
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.187_189delAAG
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4277_4279delAAG
  hgvsp: ENSP00000437188.2:p.Glu1426del
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4364_4366delAAG
  hgvsp: ENSP00000407746.1:p.Glu1455del
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2462+239_2462+241delTCT
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2213_2215delAAG
  hgvsp: ENSP00000407183.2:p.Glu738del
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1426del
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: TAGA
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ

6-155575163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575163
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575163
    reference: chr 6
allele count: 1
allele frequency: 8.297515723792297e-6
allele num: 120518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4369C>T
  hgvsp: ENSP00000407746.1:p.Arg1457Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4354C>T
  hgvsp: ENSP00000353528.4:p.Arg1452Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4282C>T
  hgvsp: ENSP00000437188.2:p.Arg1428Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.192C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1057C>T
  hgvsp: ENSP00000275246.7:p.Arg353Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2218C>T
  hgvsp: ENSP00000407183.2:p.Arg740Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4282C>T
  hgvsp: ENSP00000327315.5:p.Arg1428Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2462+234G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4369C>T
  hgvsp: ENSP00000433348.2:p.Arg1457Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2410C>T
  hgvsp: ENSP00000356142.2:p.Arg804Trp
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2290C>T
  hgvsp: ENSP00000435335.2:p.Arg764Trp
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1428Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

6-155575164-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575164
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575164
    reference: chr 6
allele count: 2
allele frequency: 1.659503144758459e-5
allele num: 120518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2291G>A
  hgvsp: ENSP00000435335.2:p.Arg764Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4283G>A
  hgvsp: ENSP00000437188.2:p.Arg1428Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4355G>A
  hgvsp: ENSP00000353528.4:p.Arg1452Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2411G>A
  hgvsp: ENSP00000356142.2:p.Arg804Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2219G>A
  hgvsp: ENSP00000407183.2:p.Arg740Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1058G>A
  hgvsp: ENSP00000275246.7:p.Arg353Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4283G>A
  hgvsp: ENSP00000327315.5:p.Arg1428Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.193G>A
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2462+233C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4370G>A
  hgvsp: ENSP00000433348.2:p.Arg1457Gln
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4370G>A
  hgvsp: ENSP00000407746.1:p.Arg1457Gln
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1428Gln
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

6-155575174-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575174
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575174
    reference: chr 6
allele count: 1
allele frequency: 8.313242996092776e-6
allele num: 120290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4365C>G
  hgvsp: ENST00000360366.4:c.4365C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4293C>G
  hgvsp: ENST00000461783.3:c.4293C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.203C>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4380C>G
  hgvsp: ENST00000529824.2:c.4380C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2462+223G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2301C>G
  hgvsp: ENST00000528391.2:c.2301C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2421C>G
  hgvsp: ENST00000367174.2:c.2421C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1068C>G
  hgvsp: ENST00000275246.7:c.1068C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2229C>G
  hgvsp: ENST00000456877.2:c.2229C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4293C>G
  hgvsp: ENST00000318981.5:c.4293C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4380C>G
  hgvsp: ENST00000456144.1:c.4380C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr1431Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ

6-155575174-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575174
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575174
    reference: chr 6
allele count: 1
allele frequency: 8.313242996092776e-6
allele num: 120290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.203C>T
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1068C>T
  hgvsp: ENST00000275246.7:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4380C>T
  hgvsp: ENST00000529824.2:c.4380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4293C>T
  hgvsp: ENST00000461783.3:c.4293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2301C>T
  hgvsp: ENST00000528391.2:c.2301C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2229C>T
  hgvsp: ENST00000456877.2:c.2229C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4293C>T
  hgvsp: ENST00000318981.5:c.4293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4365C>T
  hgvsp: ENST00000360366.4:c.4365C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2421C>T
  hgvsp: ENST00000367174.2:c.2421C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2462+223G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4380C>T
  hgvsp: ENST00000456144.1:c.4380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11806
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr1431Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

6-155575175-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575175
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575175
    reference: chr 6
allele count: 1
allele frequency: 8.313381218409152e-6
allele num: 120288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146426
  ensembl transcript: ENST00000537845
  gene symbol: TIAM2
  hgvsc: ENST00000537845.1:n.204A>G
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000353528
  ensembl transcript: ENST00000360366
  gene symbol: TIAM2
  hgvsc: ENST00000360366.4:c.4366A>G
  hgvsp: ENSP00000353528.4:p.Ile1456Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000437188
  ensembl transcript: ENST00000461783
  gene symbol: TIAM2
  hgvsc: ENST00000461783.3:c.4294A>G
  hgvsp: ENSP00000437188.2:p.Ile1432Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000327315
  ensembl transcript: ENST00000318981
  gene symbol: TIAM2
  hgvsc: ENST00000318981.5:c.4294A>G
  hgvsp: ENSP00000327315.5:p.Ile1432Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000435335
  ensembl transcript: ENST00000528391
  gene symbol: TIAM2
  hgvsc: ENST00000528391.2:c.2302A>G
  hgvsp: ENSP00000435335.2:p.Ile768Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407183
  ensembl transcript: ENST00000456877
  gene symbol: TIAM2
  hgvsc: ENST00000456877.2:c.2230A>G
  hgvsp: ENSP00000407183.2:p.Ile744Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000275246
  ensembl transcript: ENST00000275246
  gene symbol: TIAM2
  hgvsc: ENST00000275246.7:c.1069A>G
  hgvsp: ENSP00000275246.7:p.Ile357Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000356142
  ensembl transcript: ENST00000367174
  gene symbol: TIAM2
  hgvsc: ENST00000367174.2:c.2422A>G
  hgvsp: ENSP00000356142.2:p.Ile808Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000407746
  ensembl transcript: ENST00000456144
  gene symbol: TIAM2
  hgvsc: ENST00000456144.1:c.4381A>G
  hgvsp: ENSP00000407746.1:p.Ile1461Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146426
  ensembl protein: ENSP00000433348
  ensembl transcript: ENST00000529824
  gene symbol: TIAM2
  hgvsc: ENST00000529824.2:c.4381A>G
  hgvsp: ENSP00000433348.2:p.Ile1461Val
  variant of: http://identifiers.org/hgnc/11806
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000235381
  ensembl transcript: ENST00000435295
  gene symbol: RP11-477D19.2
  hgvsc: ENST00000435295.1:n.2462+222T>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile1432Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

6-155575177-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155575177
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 155575177
    reference: chr 6
allele count: 1
allele frequency: 8.318775476249896e-6
allele num: 120210
alternate allele: T
canonical: true
consequence: synonymous
filter: PASS
hgvs: p.Ile1432Ile
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 7265
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3908
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31648
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8335
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3100
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.233e0

QD
type: SiteQuality
SIO_000300: 1.43e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e0

VQSLOD
type: SiteQuality
SIO_000300: -3.224e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.463e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.876267e6

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3090
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7373
bin: 9.75e1
variant carriers: 143

GenotypeQuality
all individuals: 31619
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3896
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.349787890474354e-3
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 129
allele frequency: 1.491329479768786e-2
allele num: 8650
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.498560460652591e-5
allele num: 66688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.883168e6

QD
type: SiteQuality
SIO_000300: 1.336e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.52e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.19e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.24e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3916
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8359
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7247
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3095
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.891287586738628e-4
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.095330976472023e-5
allele num: 16406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.877918e6

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

FS
type: SiteQuality
SIO_000300: 1.147e0

QD
type: SiteQuality
SIO_000300: 1.292e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.937e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7246
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1720
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8370
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31769
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.672e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.308e0

DP
type: SiteQuality
SIO_000300: 1.877915e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.06e0

FS
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InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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SIO_000300: -8.29e-1

QD
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ReadPosRankSum
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SIO_000300: 1.06e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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allele frequency: 1.731601731601732e-4
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African
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European (Finnish)
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQRankSum
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QD
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ClippingRankSum
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MQ
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InbreedingCoeff
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DP
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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European (Non-Finnish)
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African
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East Asian
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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MQRankSum
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QD
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FS
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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FS
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ClippingRankSum
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SIO_000300: -4.78e-1

ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Finnish)
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East Asian
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African
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Latino
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allele frequency: 3.894755063181582e-3
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European (Non-Finnish)
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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DP
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Other
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Latino
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South Asian
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ReadPosRankSum
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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FS
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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European (Non-Finnish)
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South Asian
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African
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East Asian
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Latino
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QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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East Asian
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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VQSLOD
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FS
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DP
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Latino
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South Asian
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Other
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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South Asian
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Latino
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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MQ
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VQSLOD
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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allele num: 66716
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African
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European (Finnish)
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South Asian
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Other
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BaseQRankSum
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FS
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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Other
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allele num: 906
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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FS
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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African
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Other
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Latino
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MQRankSum
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ReadPosRankSum
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DP
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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Other
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African
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East Asian
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European (Finnish)
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MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
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FS
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InbreedingCoeff
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ClippingRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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ClippingRankSum
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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SIO_000300: -1.173e0

MQ
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SIO_000300: 5.955e1

VQSLOD
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ReadPosRankSum
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SIO_000300: -1.065e0

QD
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SIO_000300: 1.014e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.500855162480871e-5
allele num: 66654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
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VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.938e1

QD
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SIO_000300: 1.116e1

InbreedingCoeff
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SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.8698e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 4.628558204119417e-4
allele num: 8642
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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MQRankSum
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SIO_000300: 2.74e-1

FS
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SIO_000300: 1.992e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.698e0

MQ
type: SiteQuality
SIO_000300: 5.812e1

InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
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MQRankSum
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QD
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ClippingRankSum
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SIO_000300: 4.26e-1

ReadPosRankSum
type: SiteQuality
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DP
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SIO_000300: 1.866463e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.34e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

DP
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InbreedingCoeff
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ClippingRankSum
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FS
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VQSLOD
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QD
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BaseQRankSum
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MQ
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ReadPosRankSum
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SIO_000300: 2.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.128201985537444e-5
allele num: 16318
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502268425322237e-5
allele num: 66566
num of homozygotes: 0

Other
type: Population
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allele num: 900
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.7e-2

MQRankSum
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MQ
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FS
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DP
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-1

QD
type: SiteQuality
SIO_000300: 1.11e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.047e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

DP
type: SiteQuality
SIO_000300: 1.837289e6

MQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7221
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1709
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7866
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3784
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2959
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 1.837289e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.047e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

QD
type: SiteQuality
SIO_000300: 1.11e1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7217
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1366
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25917
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7776
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1315
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.281e0

FS
type: SiteQuality
SIO_000300: 2.133e0

DP
type: SiteQuality
SIO_000300: 1.832977e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.674e-1

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.904e1

GenotypeQuality
all individuals: 119
bin: 7.5e0
variant carriers: 51

GenotypeQuality
all individuals: 1090
bin: 4.75e1
variant carriers: 186

GenotypeQuality
all individuals: 742
bin: 8.75e1
variant carriers: 299

GenotypeQuality
all individuals: 424
bin: 5.75e1
variant carriers: 170

GenotypeQuality
all individuals: 1300
bin: 7.25e1
variant carriers: 263

GenotypeQuality
all individuals: 871
bin: 4.25e1
variant carriers: 103

GenotypeQuality
all individuals: 151
bin: 2.5e0
variant carriers: 45

GenotypeQuality
all individuals: 1538
bin: 3.75e1
variant carriers: 117

GenotypeQuality
all individuals: 30905
bin: 9.75e1
variant carriers: 28483

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 54

GenotypeQuality
all individuals: 162
bin: 1.75e1
variant carriers: 52

GenotypeQuality
all individuals: 3318
bin: 6.75e1
variant carriers: 457

GenotypeQuality
all individuals: 1078
bin: 9.25e1
variant carriers: 506

GenotypeQuality
all individuals: 1811
bin: 7.75e1
variant carriers: 520

GenotypeQuality
all individuals: 1492
bin: 8.25e1
variant carriers: 560

GenotypeQuality
all individuals: 10506
bin: 6.25e1
variant carriers: 382

Latino
type: Population
allele count: 2120
allele frequency: 1.923774954627949e-1
allele num: 11020
num of homozygotes: 237

East Asian
type: Population
allele count: 39
allele frequency: 4.637336504161712e-3
allele num: 8410
num of homozygotes: 0

South Asian
type: Population
allele count: 5157
allele frequency: 3.193584344810503e-1
allele num: 16148
num of homozygotes: 839

African
type: Population
allele count: 2728
allele frequency: 2.675034320454991e-1
allele num: 10198
num of homozygotes: 375

European (Finnish)
type: Population
allele count: 2602
allele frequency: 3.976161369193154e-1
allele num: 6544
num of homozygotes: 518

Other
type: Population
allele count: 336
allele frequency: 3.775280898876405e-1
allele num: 890
num of homozygotes: 59

European (Non-Finnish)
type: Population
allele count: 27072
allele frequency: 4.117289207932839e-1
allele num: 65752
num of homozygotes: 5657

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.55e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

QD
type: SiteQuality
SIO_000300: 2.3e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

DP
type: SiteQuality
SIO_000300: 1.985151e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

GenotypeQuality
all individuals: 3526
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13839
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4453
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2470
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7663
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1006
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1979
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4573
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5052
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.094491769484949e-5
allele num: 65974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10948
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16006
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.735e0

DP
type: SiteQuality
SIO_000300: 1.817112e6

FS
type: SiteQuality
SIO_000300: 4.946e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

QD
type: SiteQuality
SIO_000300: 1.39e1

GenotypeQuality
all individuals: 2449
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2674
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5053
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4444
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2206
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4538
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10962
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.25e-5
allele num: 16000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.325e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

FS
type: SiteQuality
SIO_000300: 3.522e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.439e0

MQ
type: SiteQuality
SIO_000300: 5.483e1

MQRankSum
type: SiteQuality
SIO_000300: -1.342e0

QD
type: SiteQuality
SIO_000300: 1.613e1

DP
type: SiteQuality
SIO_000300: 1.816587e6

GenotypeQuality
all individuals: 1078
bin: 8.75e1
variant carriers: 1045

GenotypeQuality
all individuals: 4674
bin: 6.25e1
variant carriers: 1606

GenotypeQuality
all individuals: 1840
bin: 9.25e1
variant carriers: 1791

GenotypeQuality
all individuals: 171
bin: 1.75e1
variant carriers: 119

GenotypeQuality
all individuals: 862
bin: 3.25e1
variant carriers: 307

GenotypeQuality
all individuals: 2086
bin: 8.25e1
variant carriers: 2016

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 101

GenotypeQuality
all individuals: 954
bin: 4.75e1
variant carriers: 875

GenotypeQuality
all individuals: 2315
bin: 6.75e1
variant carriers: 1814

GenotypeQuality
all individuals: 840
bin: 5.75e1
variant carriers: 750

GenotypeQuality
all individuals: 2399
bin: 2.25e1
variant carriers: 160

GenotypeQuality
all individuals: 658
bin: 2.75e1
variant carriers: 155

GenotypeQuality
all individuals: 1158
bin: 7.25e1
variant carriers: 1032

GenotypeQuality
all individuals: 525
bin: 4.25e1
variant carriers: 447

GenotypeQuality
all individuals: 149
bin: 7.5e0
variant carriers: 86

GenotypeQuality
all individuals: 36436
bin: 9.75e1
variant carriers: 36236

East Asian
type: Population
allele count: 2793
allele frequency: 3.427835051546392e-1
allele num: 8148
num of homozygotes: 454

South Asian
type: Population
allele count: 9820
allele frequency: 6.1521112642526e-1
allele num: 15962
num of homozygotes: 3024

European (Non-Finnish)
type: Population
allele count: 49743
allele frequency: 7.603638031183124e-1
allele num: 65420
num of homozygotes: 18787

European (Finnish)
type: Population
allele count: 5156
allele frequency: 7.878973105134475e-1
allele num: 6544
num of homozygotes: 2021

Other
type: Population
allele count: 637
allele frequency: 7.157303370786516e-1
allele num: 890
num of homozygotes: 220

Latino
type: Population
allele count: 4206
allele frequency: 3.938939876381345e-1
allele num: 10678
num of homozygotes: 854

African
type: Population
allele count: 7048
allele frequency: 6.963050780478166e-1
allele num: 10122
num of homozygotes: 2429

BaseQRankSum
type: SiteQuality
SIO_000300: -2.681e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

DP
type: SiteQuality
SIO_000300: 1.837026e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.78e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.109e1

GenotypeQuality
all individuals: 1215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2189
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 358
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4370
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16310
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.026694045174538e-4
allele num: 9740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9164
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.231527093596059e-3
allele num: 812
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

FS
type: SiteQuality
SIO_000300: 2.108e0

DP
type: SiteQuality
SIO_000300: 1.295415e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

QD
type: SiteQuality
SIO_000300: 2.441e1

VQSLOD
type: SiteQuality
SIO_000300: -4.926e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 16989
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19876
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4907
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2189
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4091
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.368931711754203e-5
allele num: 59366
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-2

FS
type: SiteQuality
SIO_000300: 2.482e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.366e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQ
type: SiteQuality
SIO_000300: 5.606e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.262625e6

QD
type: SiteQuality
SIO_000300: 8.35e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58758
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.21483942414175e-4
allele num: 9030
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.215e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.259e0

MQRankSum
type: SiteQuality
SIO_000300: 9.69e-1

DP
type: SiteQuality
SIO_000300: 1.214008e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7286
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8986
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13950
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.079602e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.13e0

QD
type: SiteQuality
SIO_000300: 5.92e0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7294
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.432254368375824e-4
allele num: 13964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56234
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8986
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

QD
type: SiteQuality
SIO_000300: 6.78e0

DP
type: SiteQuality
SIO_000300: 1.079036e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58956
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.350621285791464e-4
allele num: 7404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14274
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.232668e6

QD
type: SiteQuality
SIO_000300: 1.313e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.694283487513131e-5
allele num: 59022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.285051067780872e-5
allele num: 10770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14300
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7412
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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MQRankSum
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QD
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SIO_000300: 1.357e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.24e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.335470085470086e-4
allele num: 7488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59350
num of homozygotes: 0

InbreedingCoeff
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DP
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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QD
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MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59348
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.334044823906083e-4
allele num: 7496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.073828287017835e-4
allele num: 14466
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.310944e6

MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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VQSLOD
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QD
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MQ
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5732
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GenotypeQuality
all individuals: 182
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 14472
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59502
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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QD
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DP
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MQ
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 1.68e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.170798898071625e-3
allele num: 14520
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59586
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.219988936013277e-5
allele num: 10846
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
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num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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MQ
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DP
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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MQRankSum
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SIO_000300: 1.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9518
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.669449081803005e-5
allele num: 59900
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Latino
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allele frequency: 0.0e0
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South Asian
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InbreedingCoeff
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
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MQRankSum
type: SiteQuality
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10914
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.664391997603276e-5
allele num: 60082
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.851e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
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SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
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DP
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SIO_000300: 1.376895e6

MQ
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SIO_000300: 5.951e1

ClippingRankSum
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SIO_000300: 5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.491e0

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 60358
num of homozygotes: 0

Latino
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Other
type: Population
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FS
type: SiteQuality
SIO_000300: 9.467000000000001e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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QD
type: SiteQuality
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MQ
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.646795336275608e-5
allele num: 60724
num of homozygotes: 0

African
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Other
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South Asian
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Latino
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East Asian
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European (Finnish)
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QD
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MQRankSum
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DP
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MQ
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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FS
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VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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DP
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ReadPosRankSum
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.593320799209713e-5
allele num: 62762
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8172
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

DP
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SIO_000300: 1.495108e6

QD
type: SiteQuality
SIO_000300: 1.228e1

BaseQRankSum
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SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

VQSLOD
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SIO_000300: 4.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e0

MQ
type: SiteQuality
SIO_000300: 5.58e1

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15458
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.580278128950695e-5
allele num: 63280
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
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SIO_000300: 1.510709e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.16e-1

FS
type: SiteQuality
SIO_000300: 2.817e0

VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQ
type: SiteQuality
SIO_000300: 4.213e1

QD
type: SiteQuality
SIO_000300: 5.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8322
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.568824323052305e-5
allele num: 63742
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.38e0

MQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -8.47e-1

DP
type: SiteQuality
SIO_000300: 1.525166e6

VQSLOD
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SIO_000300: 1.56e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.885e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.53e-1

InbreedingCoeff
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SIO_000300: -4.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 14

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.402043868394816e-4
allele num: 64192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.983057604145904e-4
allele num: 10034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.539855e6

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

FS
type: SiteQuality
SIO_000300: 7.21e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

VQSLOD
type: SiteQuality
SIO_000300: 2.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 715
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.552312946289972e-5
allele num: 64420
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.21e0

BaseQRankSum
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SIO_000300: -1.658e0

QD
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ClippingRankSum
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SIO_000300: -1.397e0

MQ
type: SiteQuality
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -4.0e-4

ReadPosRankSum
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SIO_000300: 1.48e0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

DP
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SIO_000300: 1.548067e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15944
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.095783542814686e-5
allele num: 64604
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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Other
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East Asian
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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ReadPosRankSum
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QD
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DP
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MQRankSum
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ClippingRankSum
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MQ
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SIO_000300: 5.968e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
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African
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East Asian
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South Asian
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European (Non-Finnish)
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allele num: 64670
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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QD
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.54354335813293e-5
allele num: 64786
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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FS
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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SIO_000300: 1.55913e6

QD
type: SiteQuality
SIO_000300: 6.38e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.528117359413203e-5
allele num: 65440
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African
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Latino
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FS
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SIO_000300: 0.0e0

MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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BaseQRankSum
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QD
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ClippingRankSum
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SIO_000300: 1.1e0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

African
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allele num: 10250
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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SIO_000300: 1.838e0

ReadPosRankSum
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QD
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MQ
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SIO_000300: 5.946e1

DP
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SIO_000300: 1.580897e6

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.025901718712176e-5
allele num: 66096
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.555146346191122e-3
allele num: 10318
num of homozygotes: 0

South Asian
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allele frequency: 6.090875867949811e-5
allele num: 16418
num of homozygotes: 0

East Asian
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QD
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SIO_000300: 1.187e1

FS
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.7e-3

VQSLOD
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ClippingRankSum
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MQRankSum
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SIO_000300: 3.01e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
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SIO_000300: -4.07e-1

DP
type: SiteQuality
SIO_000300: 1.595947e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66122
num of homozygotes: 0

African
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 9.19e-1

MQ
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InbreedingCoeff
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ClippingRankSum
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QD
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MQRankSum
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ReadPosRankSum
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FS
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SIO_000300: 5.48e-1

VQSLOD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66198
num of homozygotes: 0

South Asian
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num of homozygotes: 0

African
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Other
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East Asian
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European (Finnish)
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Latino
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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DP
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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South Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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DP
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FS
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele num: 10312
num of homozygotes: 0

South Asian
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allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
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Latino
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East Asian
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Other
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European (Finnish)
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VQSLOD
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MQ
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.66e-1

FS
type: SiteQuality
SIO_000300: 4.801e0

QD
type: SiteQuality
SIO_000300: 1.051e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

DP
type: SiteQuality
SIO_000300: 1.595605e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48519
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4309
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515243348081702e-5
allele num: 65996
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.221e1

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-1

FS
type: SiteQuality
SIO_000300: 6.288e0

DP
type: SiteQuality
SIO_000300: 1.592757e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65996
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.714396735962697e-5
allele num: 10294
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

DP
type: SiteQuality
SIO_000300: 1.592757e6

VQSLOD
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SIO_000300: 3.3e-1

InbreedingCoeff
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SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 6.288e0

QD
type: SiteQuality
SIO_000300: 1.221e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515197430225158e-5
allele num: 65998
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.592112e6

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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SIO_000300: 6.93e0