6-112020831-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020831
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020831
    reference: chr 6
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+476C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+476C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+476C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.698-3172C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.698-3172C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.740C>T
  hgvsp: ENSP00000440646.1:p.Ser247Leu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.740C>T
  hgvsp: ENSP00000357667.4:p.Ser247Leu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.740C>T
  hgvsp: ENSP00000357671.3:p.Ser247Leu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+476C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.593C>T
  hgvsp: ENSP00000229470.5:p.Ser198Leu
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9011
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser247Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-112020832-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020832
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020832
    reference: chr 6
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.592T>A
  hgvsp: ENSP00000229470.5:p.Ser198Thr
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.698-3173T>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+475T>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+475T>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+475T>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.698-3173T>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.739T>A
  hgvsp: ENSP00000357667.4:p.Ser247Thr
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.739T>A
  hgvsp: ENSP00000357671.3:p.Ser247Thr
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+475T>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.739T>A
  hgvsp: ENSP00000440646.1:p.Ser247Thr
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser247Thr
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

6-112020839-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020839
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020839
    reference: chr 6
allele count: 17
allele frequency: 1.400998829753919e-4
allele num: 121342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.585G>A
  hgvsp: ENST00000229470.5:c.585G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+468G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.698-3180G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.698-3180G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+468G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.732G>A
  hgvsp: ENST00000368682.3:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.732G>A
  hgvsp: ENST00000538466.1:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+468G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+468G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.732G>A
  hgvsp: ENST00000368678.4:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val244Val
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/6-112020860-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020860
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020860
    reference: chr 6
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.564T>G
  hgvsp: ENST00000229470.5:c.564T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+447T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.711T>G
  hgvsp: ENST00000368678.4:c.711T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.711T>G
  hgvsp: ENST00000538466.1:c.711T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.711T>G
  hgvsp: ENST00000368682.3:c.711T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+447T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.698-3201T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+447T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+447T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.698-3201T>G
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2210
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly237Gly
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

6-112020868-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020868
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020868
    reference: chr 6
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.703G>A
  hgvsp: ENSP00000357667.4:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+439G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.556G>A
  hgvsp: ENSP00000229470.5:p.Ala186Thr
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.703G>A
  hgvsp: ENSP00000357671.3:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.698-3209G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+439G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.698-3209G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+439G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+439G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.703G>A
  hgvsp: ENSP00000440646.1:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14521
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala235Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

6-112020871-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020871
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020871
    reference: chr 6
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+436A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.553A>G
  hgvsp: ENSP00000229470.5:p.Lys185Glu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+436A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.698-3212A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.700A>G
  hgvsp: ENSP00000357667.4:p.Lys234Glu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.700A>G
  hgvsp: ENSP00000440646.1:p.Lys234Glu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+436A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.698-3212A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.700A>G
  hgvsp: ENSP00000357671.3:p.Lys234Glu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+436A>G
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26499
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys234Glu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

6-112020872-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020872
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020872
    reference: chr 6
allele count: 1
allele frequency: 8.296001327360212e-6
allele num: 120540
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+435G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.552G>C
  hgvsp: ENSP00000229470.5:p.Glu184Asp
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.699G>C
  hgvsp: ENSP00000357671.3:p.Glu233Asp
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.699G>C
  hgvsp: ENSP00000440646.1:p.Glu233Asp
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.699G>C
  hgvsp: ENSP00000357667.4:p.Glu233Asp
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+435G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+435G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.698-3213G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.698-3213G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+435G>C
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu233Asp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

6-112020879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020879
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020879
    reference: chr 6
allele count: 1
allele frequency: 8.326949338840222e-6
allele num: 120092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+428C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-6C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+428C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+428C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+428C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-6C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+3209C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-6C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-6C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+3209C>T
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
hgvs: c.698-6C>T
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

6-112020893-TAAAGAAAACACAGTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020893
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020878
    reference: chr 6
allele count: 1
allele frequency: 8.381808123648433e-6
allele num: 119306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8454
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9095
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2658
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: TAAAGAAAACACAGTC
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/6-112020900-AAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020900
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020898
    reference: chr 6
allele count: 1
allele frequency: 8.404915194405689e-6
allele num: 118978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+405_636+406delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-29_551-28delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-29_698-28delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+3186_697+3187delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+405_664+406delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-29_698-28delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-29_698-28delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+405_862+406delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+3186_697+3187delGT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+405_862+406delGT
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13663
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: AAC
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

6-112020914-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020914
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020914
    reference: chr 6
allele count: 9
allele frequency: 7.637863435001782e-5
allele num: 117834
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-41T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+393T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-41T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+3174T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-41T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+393T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+393T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+3174T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+393T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-41T>C
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14757
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11390
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6112
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6742
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

6-112020921-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112020921
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112020921
    reference: chr 6
allele count: 1
allele frequency: 8.550077805708033e-6
allele num: 116958
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+386T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-48T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+386T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-48T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-48T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+3167T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+386T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+3167T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-48T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+386T>C
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6913
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4067
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5767
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

6-112021256-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021256
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021256
    reference: chr 6
allele count: 1
allele frequency: 8.345294922722569e-6
allele num: 119828
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+51C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-383C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.318C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-383C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2832C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+51C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-383C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2832C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+51C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-383C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+51C>G
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13492
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

6-112021261-TTCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021261
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021258
    reference: chr 6
allele count: 1
allele frequency: 8.3365290027844e-6
allele num: 119954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-391_551-389delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+43_636+45delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-391_698-389delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.310_312delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+43_862+45delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2824_697+2826delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2824_697+2826delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+43_664+45delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-391_698-389delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+43_862+45delGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-391_698-389delGGA
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13574
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7895
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: TTCC
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-112021266-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021266
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021267
    reference: chr 6
allele count: 1
allele frequency: 8.333333333333334e-6
allele num: 120000
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+40_862+41insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.307_308insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-394_698-393insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2821_697+2822insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-394_551-393insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+40_862+41insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2821_697+2822insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+40_664+41insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-394_698-393insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-394_698-393insA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+40_636+41insA
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13677
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-112021267-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021267
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021266
    reference: chr 6
allele count: 2
allele frequency: 1.666916704172292e-5
allele num: 119982
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+39delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-395delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2820delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+39delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-395delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+39delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+39delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-395delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.306delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2820delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-395delG
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AC
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-112021268-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021268
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021268
    reference: chr 6
allele count: 1
allele frequency: 8.34599142032082e-6
allele num: 119818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+39G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-395G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2820G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2820G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-395G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+39G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.306G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-395G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+39G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+39G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-395G>T
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13765
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9006
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

6-112021268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021268
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021268
    reference: chr 6
allele count: 2
allele frequency: 1.669198284064164e-5
allele num: 119818
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+39G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.306G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-395G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+39G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2820G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-395G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-395G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+39G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2820G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+39G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-395G>A
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13774
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2216
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

6-112021269-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021269
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021269
    reference: chr 6
allele count: 17
allele frequency: 1.417044545212056e-4
allele num: 119968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+38C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2819C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+38C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-396C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+38C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.305C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+38C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-396C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-396C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2819C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-396C>T
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13771
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13464
  bin: 9.75e1
  variant carriers: 17
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

6-112021272-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021272
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021272
    reference: chr 6
allele count: 1
allele frequency: 8.323622440486099e-6
allele num: 120140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+35C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-399C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-399C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+35C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+35C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+35C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-399C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-399C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2816C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.302C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2816C>G
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-112021279-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021279
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021279
    reference: chr 6
allele count: 141
allele frequency: 1.171057439952161e-3
allele num: 120404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2809T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-406T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-406T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-406T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2809T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.295T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+28T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+28T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-406T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+28T>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+28T>C
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 13845
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14195
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3266
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 2
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

6-112021283-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021283
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021283
    reference: chr 6
allele count: 1
allele frequency: 8.295863682367972e-6
allele num: 120542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-410C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-410C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.291C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+24C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2805C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-410C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2805C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+24C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+24C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-410C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+24C>T
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/6-112021286-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021286
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021286
    reference: chr 6
allele count: 1
allele frequency: 8.289124668435012e-6
allele num: 120640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.288T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+21T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-413T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+21T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-413T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-413T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+21T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2802T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2802T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-413T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+21T>G
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13919
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

6-112021291-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021291
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021291
    reference: chr 6
allele count: 6
allele frequency: 4.966722956193504e-5
allele num: 120804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-418A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+16A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2797A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.283A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+16A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-418A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-418A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-418A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+16A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2797A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+16A>G
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14589
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

6-112021291-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021291
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021291
    reference: chr 6
allele count: 1
allele frequency: 8.27787159365584e-6
allele num: 120804
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2797A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-418A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-418A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-418A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-418A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+16A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.283A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+16A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+16A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2797A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+16A>C
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5205
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

6-112021299-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021299
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021299
    reference: chr 6
allele count: 7
allele frequency: 5.781397115908753e-5
allele num: 121078
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.862+8G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-426G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-426G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-426G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-426G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.862+8G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2789G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.664+8G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.275G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.636+8G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2789G>A
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9039
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: c.862+8G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

6-112021310-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021310
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021310
    reference: chr 6
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-437A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.633A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-437A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.859A>C
  hgvsp: ENSP00000357656.2:p.Met287Leu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.859A>C
  hgvsp: ENSP00000346671.3:p.Met287Leu
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.264A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2778A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-437A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-437A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2778A>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.661A>C
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met287Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/6-112021352-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021352
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021351
    reference: chr 6
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.816delG
  hgvsp: ENSP00000346671.3:p.Gln272HisfsTer2
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.618delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-480delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-480delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.816delG
  hgvsp: ENSP00000357656.2:p.Gln272HisfsTer2
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-480delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2735delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.221delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2735delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.590delG
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-480delG
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln272HisfsTer2
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: AC
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS

6-112021409-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021409
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021409
    reference: chr 6
allele count: 3
allele frequency: 2.471006852925672e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-536A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-536A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.623A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2679A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-536A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.760A>G
  hgvsp: ENSP00000346671.3:p.Thr254Ala
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.534A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2679A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.760A>G
  hgvsp: ENSP00000357656.2:p.Thr254Ala
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.562A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-536A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.165A>G
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9029
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr254Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

6-112021430-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021430
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021430
    reference: chr 6
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-557C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-557C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.739C>G
  hgvsp: ENSP00000357656.2:p.His247Asp
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.513C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.541C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.739C>G
  hgvsp: ENSP00000346671.3:p.His247Asp
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.602C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2658C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.144C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-557C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-557C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2658C>G
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His247Asp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

6-112021439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021439
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021439
    reference: chr 6
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.730G>A
  hgvsp: ENSP00000346671.3:p.Val244Ile
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.504G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-566G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.135G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.593G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2649G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.730G>A
  hgvsp: ENSP00000357656.2:p.Val244Ile
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-566G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2649G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.532G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-566G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-566G>A
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val244Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

6-112021448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021448
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021448
    reference: chr 6
allele count: 4
allele frequency: 3.296033224014898e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2640C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.721C>T
  hgvsp: ENSP00000357656.2:p.Arg241Cys
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.126C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.584C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.721C>T
  hgvsp: ENSP00000346671.3:p.Arg241Cys
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-575C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-575C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.495C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.523C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2640C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-575C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-575C>T
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg241Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

6-112021462-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021462
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021462
    reference: chr 6
allele count: 2
allele frequency: 1.64866870002473e-5
allele num: 121310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.570C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.112C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.707C>G
  hgvsp: ENSP00000357656.2:p.Ala236Gly
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.509C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2626C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-589C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2626C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.707C>G
  hgvsp: ENSP00000346671.3:p.Ala236Gly
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.481C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-589C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-589C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-589C>G
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala236Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

6-112021483-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021483
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021483
    reference: chr 6
allele count: 3
allele frequency: 2.478191911181602e-5
allele num: 121056
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-610C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2605C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-610C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-12C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-12C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-12C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-12C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2605C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-610C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-610C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-12C>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-12C>G
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14893
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13976
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-112021486-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021486
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021486
    reference: chr 6
allele count: 2
allele frequency: 1.652592090694254e-5
allele num: 121022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2602G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-15G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-613G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-613G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-613G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-15G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-613G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2602G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-15G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-15G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-15G>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-15G>T
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13962
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

6-112021488-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021488
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021488
    reference: chr 6
allele count: 2
allele frequency: 1.653083827880912e-5
allele num: 120986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-615C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-615C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2600C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-17C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-615C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-615C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-17C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-17C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-17C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-17C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-17C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2600C>T
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

6-112021489-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021489
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021489
    reference: chr 6
allele count: 2
allele frequency: 1.653931394925738e-5
allele num: 120924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-18C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-616C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2599C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-18C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-18C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-616C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2599C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-18C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-18C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-616C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-616C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-18C>T
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

6-112021491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021491
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021491
    reference: chr 6
allele count: 1
allele frequency: 8.270751315049459e-6
allele num: 120908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-20C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-618C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2597C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2597C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-20C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-618C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-618C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-618C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-20C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-20C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-20C>T
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-20C>T
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

6-112021492-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021492
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021492
    reference: chr 6
allele count: 1
allele frequency: 8.272119647938589e-6
allele num: 120888
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-21G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-21G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-21G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-619G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2596G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-619G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-619G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-21G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-21G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-619G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2596G>C
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-21G>C
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-112021493-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021493
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021493
    reference: chr 6
allele count: 1
allele frequency: 8.273625337150233e-6
allele num: 120866
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-620T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2595T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-22T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-620T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-22T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-620T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-22T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2595T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-22T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-22T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-22T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-620T>G
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14614
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

6-112021503-GAGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021503
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021500
    reference: chr 6
allele count: 1
allele frequency: 8.300959590928711e-6
allele num: 120468
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-35_698-33delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2582_697+2584delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-633_698-631delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-35_500-33delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2582_697+2584delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-35_561-33delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-35_472-33delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-633_698-631delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-35_103-33delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-633_698-631delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-633_551-631delTCT
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-35_698-33delTCT
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: GAGA
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/6-112021514-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112021514
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112021514
    reference: chr 6
allele count: 1
allele frequency: 8.34752412434472e-6
allele num: 119796
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.551-641T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.698-641T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.698-641T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.103-43T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.500-43T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.698-43T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.561-43T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+2574T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.698-43T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.472-43T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.698-641T>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+2574T>G
  variant of: http://identifiers.org/hgnc/4037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6089
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

6-112024042-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112024042
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112024042
    reference: chr 6
allele count: 1
allele frequency: 8.430139434506248e-6
allele num: 118622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.697+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495927
  gene symbol: FYN
  hgvsc: ENST00000495927.1:n.332G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.471+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.697+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.697+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.560+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.102+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.550+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.697+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.697+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+46G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.499+46G>A
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

6-112024044-CTCCAGCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112024044
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112024037
    reference: chr 6
allele count: 1
allele frequency: 8.422613031466883e-6
allele num: 118728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495927
  gene symbol: FYN
  hgvsc: ENST00000495927.1:n.323_329delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.499+37_499+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.102+37_102+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+37_697+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.697+37_697+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.697+37_697+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.560+37_560+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.697+37_697+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.550+37_550+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.471+37_471+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+37_697+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.697+37_697+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.697+37_697+43delTGCTGGA
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6432
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: CTCCAGCA
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

6-112024046-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112024046
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112024046
    reference: chr 6
allele count: 5
allele frequency: 4.208895922421631e-5
allele num: 118796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.499+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.550+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.697+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.102+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495927
  gene symbol: FYN
  hgvsc: ENST00000495927.1:n.328G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.560+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.697+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.697+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.697+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.471+42G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.697+42G>A
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

6-112024047-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112024047
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112024047
    reference: chr 6
allele count: 1
allele frequency: 8.423748231012871e-6
allele num: 118712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.102+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.697+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.697+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.550+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.697+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.560+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.499+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495927
  gene symbol: FYN
  hgvsc: ENST00000495927.1:n.327G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.697+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.471+41G>A
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.697+41G>A
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

6-112024052-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 112024052
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 112024052
    reference: chr 6
allele count: 1
allele frequency: 8.403078888104602e-6
allele num: 119004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495927
  gene symbol: FYN
  hgvsc: ENST00000495927.1:n.322A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000348295
  ensembl transcript: ENST00000356013
  gene symbol: FYN
  hgvsc: ENST00000356013.2:c.697+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357671
  ensembl transcript: ENST00000368682
  gene symbol: FYN
  hgvsc: ENST00000368682.3:c.697+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000495935
  gene symbol: FYN
  hgvsc: ENST00000495935.1:n.102+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357667
  ensembl transcript: ENST00000368678
  gene symbol: FYN
  hgvsc: ENST00000368678.4:c.697+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229470
  ensembl transcript: ENST00000229470
  gene symbol: FYN
  hgvsc: ENST00000229470.5:c.550+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000440646
  ensembl transcript: ENST00000538466
  gene symbol: FYN
  hgvsc: ENST00000538466.1:c.697+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000346671
  ensembl transcript: ENST00000354650
  gene symbol: FYN
  hgvsc: ENST00000354650.3:c.697+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000476769
  gene symbol: FYN
  hgvsc: ENST00000476769.2:n.471+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000229471
  ensembl transcript: ENST00000229471
  gene symbol: FYN
  hgvsc: ENST00000229471.4:c.697+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl protein: ENSP00000357656
  ensembl transcript: ENST00000368667
  gene symbol: FYN
  hgvsc: ENST00000368667.2:c.697+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000496864
  gene symbol: FYN
  hgvsc: ENST00000496864.2:n.499+36A>G
  variant of: http://identifiers.org/hgnc/4037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000010810
  ensembl transcript: ENST00000467899
  gene symbol: FYN
  hgvsc: ENST00000467899.1:n.560+36A>G
  variant of: http://identifiers.org/hgnc/4037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

6-52541893-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541893
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541893
    reference: chr 6
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.-8C>G
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48692
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11576
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.4983967155144e-5
  allele num: 66738
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

6-52541897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541897
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541897
    reference: chr 6
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.-4G>A
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48692
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11578
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.155535012710885e-4
  allele num: 8654
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10406
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS

6-52541903-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541903
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541903
    reference: chr 6
allele count: 5
allele frequency: 4.11834475487612e-5
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.3G>A
  hgvsp: ENSP00000211314.4:p.Met1?
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5333
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48692
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Met1?
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 908
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10406
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

6-52541912-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541912
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541912
    reference: chr 6
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.12C>T
  hgvsp: ENST00000211314.4:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48693
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile4Ile
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10406
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

6-52541918-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541918
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541918
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.18T>C
  hgvsp: ENST00000211314.4:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe6Phe
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.155535012710885e-4
  allele num: 8654
  num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD

6-52541920-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541920
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541920
    reference: chr 6
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.20G>C
  hgvsp: ENSP00000211314.4:p.Gly7Ala
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48693
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly7Ala
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16512
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10406
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

6-52541920-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541920
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541920
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.20G>T
  hgvsp: ENSP00000211314.4:p.Gly7Val
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly7Val
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 8.637070305752289e-5
  allele num: 11578
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

6-52541924-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541924
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541924
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.24T>C
  hgvsp: ENST00000211314.4:c.24T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48694
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Tyr8Tyr
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10406
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

6-52541926-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541926
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541926
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.26C>G
  hgvsp: ENSP00000211314.4:p.Ala9Gly
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 9.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala9Gly
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16512
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

6-52541929-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541929
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541929
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.29C>T
  hgvsp: ENSP00000211314.4:p.Ala10Val
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1609
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala10Val
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

6-52541930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541930
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541930
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.30C>T
  hgvsp: ENST00000211314.4:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3400
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
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genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
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genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 922
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
hgvs: p.Ala10Ala
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16512
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

6-52541933-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541933
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541933
    reference: chr 6
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.33C>T
  hgvsp: ENST00000211314.4:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4879
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 48694
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  variant carriers: 3
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu11Leu
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11578
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ

6-52541935-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541935
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541935
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.35T>C
  hgvsp: ENSP00000211314.4:p.Val12Ala
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48692
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val12Ala
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 66740
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16512
  num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

6-52541935-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541935
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541935
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.35T>G
  hgvsp: ENSP00000211314.4:p.Val12Gly
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48692
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val12Gly
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10406
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 66740
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

6-52541937-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541937
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541937
    reference: chr 6
allele count: 6
allele frequency: 4.941850887885876e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.37A>T
  hgvsp: ENSP00000211314.4:p.Thr13Ser
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48693
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr13Ser
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16512
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 66740
  num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

6-52541941-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541941
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541941
    reference: chr 6
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.41T>G
  hgvsp: ENSP00000211314.4:p.Phe14Cys
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5317
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
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genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 48692
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe14Cys
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.155535012710885e-4
  allele num: 8654
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10406
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

6-52541954-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541954
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541954
    reference: chr 6
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.54T>G
  hgvsp: ENSP00000211314.4:p.Phe18Leu
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
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genotype depth: GenotypeDepth
  all individuals: 3505
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genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
  all individuals: 2553
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2761
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48692
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Phe18Leu
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

6-52541959-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541959
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541959
    reference: chr 6
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.59A>G
  hgvsp: ENSP00000211314.4:p.Tyr20Cys
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48692
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr20Cys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.498486528606108e-5
  allele num: 66734
  num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

6-52541960-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541960
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541959
    reference: chr 6
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.62delA
  hgvsp: ENSP00000211314.4:p.Lys21SerfsTer9
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48692
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys21SerfsTer9
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16512
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: TA
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

6-52541964-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541964
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541964
    reference: chr 6
allele count: 24
allele frequency: 1.976838047542955e-4
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.64C>T
  hgvsp: ENSP00000211314.4:p.Arg22Trp
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5341
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48696
  bin: 9.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 2754
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg22Trp
num of homozygotes: 1
population: African
  type: Population
  allele count: 12
  allele frequency: 1.153180857197771e-3
  allele num: 10406
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 908
  num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

6-52541965-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541965
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541965
    reference: chr 6
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.65G>A
  hgvsp: ENSP00000211314.4:p.Arg22Gln
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48689
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2752
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg22Gln
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.498531439189594e-5
  allele num: 66732
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

6-52541978-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541978
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541978
    reference: chr 6
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.70+8T>C
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48688
  bin: 9.75e1
  variant carriers: 2
hgvs: c.70+8T>C
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 66732
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11578
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-52541979-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541979
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541979
    reference: chr 6
allele count: 33
allele frequency: 2.71828665568369e-4
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.70+9A>T
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48689
  bin: 9.75e1
  variant carriers: 33
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 66732
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16512
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 3
  allele frequency: 2.591568762957844e-4
  allele num: 11576
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

6-52541985-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52541985
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 52541985
    reference: chr 6
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000096092
  ensembl protein: ENSP00000211314
  ensembl transcript: ENST00000211314
  gene symbol: TMEM14A
  hgvsc: ENST00000211314.4:c.70+15A>G
  variant of: http://identifiers.org/hgnc/21076
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3222
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9114
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4505
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 2.026711e6

FS
type: SiteQuality
SIO_000300: 9.54e-1

QD
type: SiteQuality
SIO_000300: 1.074e1

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.590000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.57e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9113
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3223
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4505
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9007
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 9.858000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.859e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.88e-1

QD
type: SiteQuality
SIO_000300: 1.084e1

DP
type: SiteQuality
SIO_000300: 2.02661e6

VQSLOD
type: SiteQuality
SIO_000300: -1.578e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

GenotypeQuality
all individuals: 4502
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8999
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27560
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9122
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3461
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2212
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 1.030802813485326e-3
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.169e1

VQSLOD
type: SiteQuality
SIO_000300: 4.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.071e0

DP
type: SiteQuality
SIO_000300: 2.026559e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4490
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8943
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3458
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501231009427731e-5
allele num: 66612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.59e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 2.557e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.076e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.020189e6

GenotypeQuality
all individuals: 3456
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.525e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.12e0

QD
type: SiteQuality
SIO_000300: 9.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.97e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.38e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.183e0

DP
type: SiteQuality
SIO_000300: 2.013946e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15974
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.99e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 5.074e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.82e-1

QD
type: SiteQuality
SIO_000300: 1.346e1

DP
type: SiteQuality
SIO_000300: 2.009786e6

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503895088278642e-5
allele num: 66494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.88e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.426e0

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.48e-1

FS
type: SiteQuality
SIO_000300: 7.83e-1

DP
type: SiteQuality
SIO_000300: 2.00887e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66378
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.39467962655071e-5
allele num: 15638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

VQSLOD
type: SiteQuality
SIO_000300: 3.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.995139e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e0

QD
type: SiteQuality
SIO_000300: 1.636e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511167528032158e-5
allele num: 66174
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
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VQSLOD
type: SiteQuality
SIO_000300: -7.392e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 3.092e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.52e0

MQ
type: SiteQuality
SIO_000300: 5.344e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.51336299524804e-5
allele num: 66078
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8576
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.11e0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.09e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14190
num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 1.367822730174169e-4
allele num: 65798
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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QD
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13686
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65524
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.721952167995334e-5
allele num: 10286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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ClippingRankSum
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DP
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SIO_000300: 1.814302e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

MQRankSum
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SIO_000300: -4.19e-1

FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 4.32e0

QD
type: SiteQuality
SIO_000300: 1.348e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507295309296997e-5
allele num: 66344
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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SIO_000300: 4.033e0

QD
type: SiteQuality
SIO_000300: 9.84e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

DP
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SIO_000300: 2.078969e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506841058405159e-5
allele num: 66364
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.532e0

ReadPosRankSum
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SIO_000300: -3.093e0

MQRankSum
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SIO_000300: -3.353e0

DP
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MQ
type: SiteQuality
SIO_000300: 5.368e1

VQSLOD
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SIO_000300: -3.861e-1

QD
type: SiteQuality
SIO_000300: 5.98e0

ClippingRankSum
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SIO_000300: 2.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.72e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506750241080039e-5
allele num: 66368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.387e1

QD
type: SiteQuality
SIO_000300: 5.77e0

FS
type: SiteQuality
SIO_000300: 6.021e0

VQSLOD
type: SiteQuality
SIO_000300: -6.314e-1

ReadPosRankSum
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SIO_000300: -3.077e0

DP
type: SiteQuality
SIO_000300: 2.085646e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.494e0

MQRankSum
type: SiteQuality
SIO_000300: -2.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013772942346524e-5
allele num: 66362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.059e1

ClippingRankSum
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SIO_000300: 1.98e-1

VQSLOD
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SIO_000300: 1.21e0

BaseQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 3.054e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e0

QD
type: SiteQuality
SIO_000300: 1.827e1

ReadPosRankSum
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SIO_000300: 1.65e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15398
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507658907248824e-5
allele num: 66328
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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MQRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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QD
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DP
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.494349915573451e-5
allele num: 15398
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African
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.507658907248824e-5
allele num: 66328
num of homozygotes: 0

East Asian
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Latino
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Other
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.014045451805413e-5
allele num: 66356
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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allele count: 15
allele frequency: 1.443973815941471e-3
allele num: 10388
num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
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MQ
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FS
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506024096385542e-5
allele num: 66400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.095023e6

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.011e0

QD
type: SiteQuality
SIO_000300: 1.373e1

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.548e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.281e0

GenotypeQuality
all individuals: 401
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13537
bin: 9.75e1
variant carriers: 136

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
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GenotypeQuality
all individuals: 18370
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 8069
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009238361770636e-5
allele num: 66462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 133
allele frequency: 8.406016938440147e-3
allele num: 15822
num of homozygotes: 2

Latino
type: Population
allele count: 3
allele frequency: 2.594706798131811e-4
allele num: 11562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.78e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

VQSLOD
type: SiteQuality
SIO_000300: 6.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

QD
type: SiteQuality
SIO_000300: 1.579e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.107545e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3501
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 212
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4499
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504302304591131e-5
allele num: 66476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.946e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: -8.45e-1

DP
type: SiteQuality
SIO_000300: 2.110367e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 6.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.602e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e0

QD
type: SiteQuality
SIO_000300: 1.21e1

GenotypeQuality
all individuals: 4497
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8141
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variant carriers: 0

GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
all individuals: 267
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 2217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13415
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3270
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-1

MQ
type: SiteQuality
SIO_000300: 5.921e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e0

FS
type: SiteQuality
SIO_000300: 2.692e0

VQSLOD
type: SiteQuality
SIO_000300: -5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

DP
type: SiteQuality
SIO_000300: 2.112993e6

QD
type: SiteQuality
SIO_000300: 1.482e1

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 165
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variant carriers: 0

GenotypeQuality
all individuals: 324
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variant carriers: 0

GenotypeQuality
all individuals: 4506
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5205
bin: 7.75e1
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GenotypeQuality
all individuals: 13418
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 19371
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.239003840911907e-4
allele num: 16142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.509515076812073e-5
allele num: 66526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 1.514e1

VQSLOD
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.26e-1

DP
type: SiteQuality
SIO_000300: 2.118292e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.45e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 165
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GenotypeQuality
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GenotypeQuality
all individuals: 114
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3271
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13418
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4506
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.195019204559534e-5
allele num: 16142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.514e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.26e-1

DP
type: SiteQuality
SIO_000300: 2.118292e6

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13413
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 183
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4505
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variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.088745088976196e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.389e0

FS
type: SiteQuality
SIO_000300: 6.22e-1

DP
type: SiteQuality
SIO_000300: 2.124304e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5215
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 8285
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20066
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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VQSLOD
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InbreedingCoeff
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MQRankSum
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DP
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MQ
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ClippingRankSum
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SIO_000300: 2.45e-1

FS
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ReadPosRankSum
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SIO_000300: -3.28e-1

BaseQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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ReadPosRankSum
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QD
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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DP
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SIO_000300: 2.130128e6

FS
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SIO_000300: 2.101e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.495055439017081e-5
allele num: 66740
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

African
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Latino
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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MQRankSum
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QD
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MQ
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SIO_000300: 5.982e1

VQSLOD
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SIO_000300: 3.3e-3

ClippingRankSum
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FS
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SIO_000300: 0.0e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

Latino
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allele num: 11576
num of homozygotes: 0

East Asian
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Other
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num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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FS
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 3.469812630117973e-4
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele num: 66708
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African
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ClippingRankSum
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QD
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FS
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MQ
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele frequency: 1.213592233009709e-4
allele num: 16480
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African
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Other
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European (Non-Finnish)
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allele num: 66696
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Latino
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East Asian
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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FS
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DP
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QD
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 66594
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InbreedingCoeff
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DP
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.02e-1

GenotypeDepth
all individuals: 3470
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13376
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004085556356645e-5
allele num: 66576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.116075e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 9.92e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

FS
type: SiteQuality
SIO_000300: 1.325e0

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.593e0

QD
type: SiteQuality
SIO_000300: 1.304e1

GenotypeDepth
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502313562886846e-5
allele num: 66564
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.571e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 1.892e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 2.113583e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.789e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeDepth
all individuals: 1956
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3256
bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005801196308876e-5
allele num: 66538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-2

DP
type: SiteQuality
SIO_000300: 2.10824e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

BaseQRankSum
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SIO_000300: 7.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

QD
type: SiteQuality
SIO_000300: 1.35e1

FS
type: SiteQuality
SIO_000300: 5.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

GenotypeDepth
all individuals: 271
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502855425308085e-5
allele num: 66540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-2

FS
type: SiteQuality
SIO_000300: 3.183e0

QD
type: SiteQuality
SIO_000300: 1.325e1

MQ
type: SiteQuality
SIO_000300: 5.915e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.802e0

VQSLOD
type: SiteQuality
SIO_000300: 4.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

DP
type: SiteQuality
SIO_000300: 2.107834e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 322
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503036132988637e-5
allele num: 66532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.051e0

DP
type: SiteQuality
SIO_000300: 2.107958e6

QD
type: SiteQuality
SIO_000300: 1.199e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

FS
type: SiteQuality
SIO_000300: 5.3e0

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 295
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503081316699233e-5
allele num: 66530
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16292
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.97e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.732e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.49e-1

QD
type: SiteQuality
SIO_000300: 1.527e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

FS
type: SiteQuality
SIO_000300: 9.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1298
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GenotypeQuality
all individuals: 4409
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506477854775535e-5
allele num: 66380
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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Latino
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allele count: 0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

ClippingRankSum
type: SiteQuality
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MQ
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DP
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 4.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

BaseQRankSum
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SIO_000300: 7.23e-1

QD
type: SiteQuality
SIO_000300: 1.739e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele num: 8582
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European (Finnish)
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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ClippingRankSum
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SIO_000300: -9.9e-2

MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele num: 14628
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European (Non-Finnish)
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Latino
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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MQRankSum
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QD
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ClippingRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -8.41e-1

DP
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SIO_000300: 2.608627e6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14730
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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East Asian
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African
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allele num: 10372
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66000
num of homozygotes: 0

African
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allele count: 4
allele frequency: 3.858024691358024e-4
allele num: 10368
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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DP
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SIO_000300: 2.60993e6

QD
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SIO_000300: 1.263e1

FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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SIO_000300: 1.78e-1

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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African
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European (Non-Finnish)
type: Population
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allele num: 65968
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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MQRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 882
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African
type: Population
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num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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QD
type: SiteQuality
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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African
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European (Finnish)
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South Asian
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Other
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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DP
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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MQRankSum
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South Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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ReadPosRankSum
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DP
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ClippingRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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QD
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 3.799114e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.008e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.551e0

DP
type: SiteQuality
SIO_000300: 3.799024e6

QD
type: SiteQuality
SIO_000300: 1.311e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 3.509e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

DP
type: SiteQuality
SIO_000300: 3.798794e6

FS
type: SiteQuality
SIO_000300: 1.3229e1

VQSLOD
type: SiteQuality
SIO_000300: -1.494e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.351e0

QD
type: SiteQuality
SIO_000300: 1.598e1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

FS
type: SiteQuality
SIO_000300: 5.25e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: -7.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 3.799091e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 3.799091e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.51e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.747e0

MQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 3.798705e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.54e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e0

FS
type: SiteQuality
SIO_000300: 4.367e0

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

DP
type: SiteQuality
SIO_000300: 3.798828e6

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.601e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.461e0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.782e0

DP
type: SiteQuality
SIO_000300: 3.798901e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.87e-1

FS
type: SiteQuality
SIO_000300: 7.632e0

MQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

QD
type: SiteQuality
SIO_000300: 1.034e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.478e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.72e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.898e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.459e0

VQSLOD
type: SiteQuality
SIO_000300: -2.902e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.837e0

MQRankSum
type: SiteQuality
SIO_000300: -3.16e-1

DP
type: SiteQuality
SIO_000300: 3.79882e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.799081e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.669e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.028e1

FS
type: SiteQuality
SIO_000300: 5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

MQ
type: SiteQuality
SIO_000300: 5.986e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.027e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.62e-1

FS
type: SiteQuality
SIO_000300: 3.271e0

MQRankSum
type: SiteQuality
SIO_000300: -1.522e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

DP
type: SiteQuality
SIO_000300: 3.798888e6

VQSLOD
type: SiteQuality
SIO_000300: -4.182e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -1.522e0

VQSLOD
type: SiteQuality
SIO_000300: -4.182e-1

DP
type: SiteQuality
SIO_000300: 3.798888e6

FS
type: SiteQuality
SIO_000300: 3.271e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.027e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.62e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.182242183451373e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 5.2e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

QD
type: SiteQuality
SIO_000300: 1.134e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

DP
type: SiteQuality
SIO_000300: 3.799365e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.05e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.005e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

QD
type: SiteQuality
SIO_000300: 1.322e1

MQRankSum
type: SiteQuality
SIO_000300: -4.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.34e-1

DP
type: SiteQuality
SIO_000300: 3.79883e6

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.192e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 908
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African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.386e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.202e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.24e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 8.47e-1

DP
type: SiteQuality
SIO_000300: 3.798951e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.63e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e-1

QD
type: SiteQuality
SIO_000300: 1.197e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 4.81e-1

DP
type: SiteQuality
SIO_000300: 3.798748e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 1.633e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.2e-1

DP
type: SiteQuality
SIO_000300: 3.79867e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.486e0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.306e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.598e0

MQ
type: SiteQuality
SIO_000300: 6.029e1

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198789222884886e-4
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

DP
type: SiteQuality
SIO_000300: 3.800213e6

VQSLOD
type: SiteQuality
SIO_000300: 3.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.83e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.74e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

FS
type: SiteQuality
SIO_000300: 2.146e0

DP
type: SiteQuality
SIO_000300: 3.798604e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.542e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

VQSLOD
type: SiteQuality
SIO_000300: -3.877e0

QD
type: SiteQuality
SIO_000300: 1.17e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.367e1

DP
type: SiteQuality
SIO_000300: 3.798187e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1

FS
type: SiteQuality
SIO_000300: 7.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

VQSLOD
type: SiteQuality
SIO_000300: 4.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 30
allele frequency: 2.883506343713956e-3
allele num: 10404
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.258e1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.572e0

MQRankSum
type: SiteQuality
SIO_000300: 1.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.799753e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1