6-31936117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936117
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936117
    reference: chr 6
allele count: 1
allele frequency: 8.660858117822314e-6
allele num: 115462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2292C>T
  hgvsp: ENST00000544581.1:c.2292C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2871C>T
  hgvsp: ENST00000375394.2:c.2871C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.587C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3370C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.759C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.244C>T
  hgvsp: ENST00000483553.1:c.244C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2243C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.18C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.432C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33579
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro957Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/6-31936123-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936123
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936123
    reference: chr 6
allele count: 1
allele frequency: 8.652764558276369e-6
allele num: 115570
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.765A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3376A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.438A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2877A>C
  hgvsp: ENST00000375394.2:c.2877A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2298A>C
  hgvsp: ENST00000544581.1:c.2298A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.24A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2249A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.593A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.250A>C
  hgvsp: ENST00000483553.1:c.250A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33659
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala959Ala
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

6-31936124-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936124
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936124
    reference: chr 6
allele count: 1
allele frequency: 8.651267410675664e-6
allele num: 115590
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2878G>T
  hgvsp: ENSP00000364543.2:p.Ala960Ser
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.25G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2299G>T
  hgvsp: ENSP00000442645.1:p.Ala767Ser
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.594G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.439G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2250G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3377G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.251G>T
  hgvsp: ENSP00000420332.1:p.Ala85Ser
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.766G>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3365
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala960Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

6-31936125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936125
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936125
    reference: chr 6
allele count: 1
allele frequency: 8.650070065567531e-6
allele num: 115606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.440C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2251C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2300C>T
  hgvsp: ENSP00000442645.1:p.Ala767Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.252C>T
  hgvsp: ENSP00000420332.1:p.Ala85Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2879C>T
  hgvsp: ENSP00000364543.2:p.Ala960Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.26C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3378C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.595C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.767C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33683
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9129
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala960Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

6-31936126-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936126
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936126
    reference: chr 6
allele count: 101
allele frequency: 8.735966232463196e-4
allele num: 115614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.253C>T
  hgvsp: ENST00000483553.1:c.253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.768C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2880C>T
  hgvsp: ENST00000375394.2:c.2880C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2301C>T
  hgvsp: ENST00000544581.1:c.2301C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.441C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3379C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.27C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2252C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.596C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26048
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12110
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12309
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala960Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

6-31936127-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936127
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936127
    reference: chr 6
allele count: 1
allele frequency: 8.646928610957387e-6
allele num: 115648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.254G>A
  hgvsp: ENSP00000420332.1:p.Val86Met
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2302G>A
  hgvsp: ENSP00000442645.1:p.Val768Met
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2881G>A
  hgvsp: ENSP00000364543.2:p.Val961Met
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.769G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.597G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3380G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.28G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2253G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.442G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33751
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val961Met
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

6-31936133-ACTGCTGT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936133
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936126
    reference: chr 6
allele count: 1
allele frequency: 8.642444774777888e-6
allele num: 115708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.36_42delTGCTGTC
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3388_3394delTGCTGTC
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2310_2316delTGCTGTC
  hgvsp: ENSP00000442645.1:p.Ala771ArgfsTer31
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.262_268delTGCTGTC
  hgvsp: ENSP00000420332.1:p.Ala89ArgfsTer31
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.450_456delTGCTGTC
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.777_783delTGCTGTC
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2889_2895delTGCTGTC
  hgvsp: ENSP00000364543.2:p.Ala964ArgfsTer31
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.605_611delTGCTGTC
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala964ArgfsTer31
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: ACTGCTGT
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

6-31936138-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936138
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936138
    reference: chr 6
allele count: 1
allele frequency: 8.639159582555808e-6
allele num: 115752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.780T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2892T>C
  hgvsp: ENST00000375394.2:c.2892T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.453T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.265T>C
  hgvsp: ENST00000483553.1:c.265T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3391T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2264T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2313T>C
  hgvsp: ENST00000544581.1:c.2313T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.39T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.608T>C
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 26135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala964Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

6-31936154-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936154
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936154
    reference: chr 6
allele count: 18
allele frequency: 1.554914393324234e-4
allele num: 115762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.624C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3407C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.281C>T
  hgvsp: ENSP00000420332.1:p.Arg95Cys
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.55C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2908C>T
  hgvsp: ENSP00000364543.2:p.Arg970Cys
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.796C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2280C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2329C>T
  hgvsp: ENSP00000442645.1:p.Arg777Cys
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.469C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg970Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

6-31936161-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936161
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936161
    reference: chr 6
allele count: 1
allele frequency: 8.637965586345104e-6
allele num: 115768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.288C>T
  hgvsp: ENSP00000420332.1:p.Ala97Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2915C>T
  hgvsp: ENSP00000364543.2:p.Ala972Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.476C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.803C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2336C>T
  hgvsp: ENSP00000442645.1:p.Ala779Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3414C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.62C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.631C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2287C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3431
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala972Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

6-31936166-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936166
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936166
    reference: chr 6
allele count: 1
allele frequency: 8.640055296353896e-6
allele num: 115740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.293G>C
  hgvsp: ENSP00000420332.1:p.Ala99Pro
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.481G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.636G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2920G>C
  hgvsp: ENSP00000364543.2:p.Ala974Pro
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.808G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2341G>C
  hgvsp: ENSP00000442645.1:p.Ala781Pro
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.67G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2292G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3419G>C
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala974Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

6-31936171-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936171
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936171
    reference: chr 6
allele count: 1
allele frequency: 8.639607416239006e-6
allele num: 115746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.813C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.641C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3424C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2925C>T
  hgvsp: ENST00000375394.2:c.2925C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2346C>T
  hgvsp: ENST00000544581.1:c.2346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.486C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2297C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.298C>T
  hgvsp: ENST00000483553.1:c.298C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.72C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His975His
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

6-31936177-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936177
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936177
    reference: chr 6
allele count: 10
allele frequency: 8.640652542079978e-5
allele num: 115732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.647C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.819C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2931C>T
  hgvsp: ENST00000375394.2:c.2931C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2352C>T
  hgvsp: ENST00000544581.1:c.2352C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.492C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.78C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3430C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.304C>T
  hgvsp: ENST00000483553.1:c.304C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2303C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33734
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala977Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

6-31936178-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936178
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936178
    reference: chr 6
allele count: 6
allele frequency: 5.184212345337665e-5
allele num: 115736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.79G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.305G>A
  hgvsp: ENSP00000420332.1:p.Gly103Arg
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.820G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2304G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.493G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2932G>A
  hgvsp: ENSP00000364543.2:p.Gly978Arg
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.648G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2353G>A
  hgvsp: ENSP00000442645.1:p.Gly785Arg
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3431G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 9161
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33757
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly978Arg
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

6-31936193-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936193
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936193
    reference: chr 6
allele count: 1
allele frequency: 8.64812508648125e-6
allele num: 115632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2319G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.94G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.320G>A
  hgvsp: ENSP00000420332.1:p.Asp108Asn
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2947G>A
  hgvsp: ENSP00000364543.2:p.Asp983Asn
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.663G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.835G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.508G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2368G>A
  hgvsp: ENSP00000442645.1:p.Asp790Asn
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3446G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3419
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp983Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

6-31936199-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936199
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936199
    reference: chr 6
allele count: 1
allele frequency: 8.651417102121328e-6
allele num: 115588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.100G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3452G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2953G>A
  hgvsp: ENSP00000364543.2:p.Val985Ile
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2374G>A
  hgvsp: ENSP00000442645.1:p.Val792Ile
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.326G>A
  hgvsp: ENSP00000420332.1:p.Val110Ile
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2325G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.841G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.669G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.514G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12041
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3250
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3419
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val985Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

6-31936203-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936203
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936203
    reference: chr 6
allele count: 3
allele frequency: 2.595604775912788e-5
allele num: 115580
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.330A>G
  hgvsp: ENSP00000420332.1:p.Asn111Ser
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.518A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3456A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.845A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2378A>G
  hgvsp: ENSP00000442645.1:p.Asn793Ser
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2329A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.673A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.104A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2957A>G
  hgvsp: ENSP00000364543.2:p.Asn986Ser
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn986Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-31936205-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936205
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936205
    reference: chr 6
allele count: 1
allele frequency: 8.654561819535076e-6
allele num: 115546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.106G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2959G>C
  hgvsp: ENSP00000364543.2:p.Asp987His
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3458G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2380G>C
  hgvsp: ENSP00000442645.1:p.Asp794His
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.332G>C
  hgvsp: ENSP00000420332.1:p.Asp112His
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.847G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000461915
  gene symbol: SKIV2L
  hgvsc: ENST00000461915.1:n.675G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2331G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.520G>C
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9138
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp987His
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-31936224-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936224
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936224
    reference: chr 6
allele count: 2
allele frequency: 1.733132289987695e-5
allele num: 115398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3477T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.351T>C
  hgvsp: ENSP00000420332.1:p.Met118Thr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2978T>C
  hgvsp: ENSP00000364543.2:p.Met993Thr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2350T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000494058
  gene symbol: SKIV2L
  hgvsc: ENST00000494058.1:n.866T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.539T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2399T>C
  hgvsp: ENSP00000442645.1:p.Met800Thr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.125T>C
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26096
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3410
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Met993Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

6-31936228-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936228
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936228
    reference: chr 6
allele count: 1
allele frequency: 8.667013347200554e-6
allele num: 115380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.129A>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.355A>T
  hgvsp: ENST00000483553.1:c.355A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2982A>T
  hgvsp: ENST00000375394.2:c.2982A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3481A>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2403A>T
  hgvsp: ENST00000544581.1:c.2403A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.543A>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2354A>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3699
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser994Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

6-31936231-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936231
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936231
    reference: chr 6
allele count: 2
allele frequency: 1.73406395227856e-5
allele num: 115336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2406T>C
  hgvsp: ENST00000544581.1:c.2406T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2357T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.358T>C
  hgvsp: ENST00000483553.1:c.358T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.546T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3484T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.1T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.132T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.2985T>C
  hgvsp: ENST00000375394.2:c.2985T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3698
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2161
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val995Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

6-31936247-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936247
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936247
    reference: chr 6
allele count: 9
allele frequency: 7.81657113079729e-5
allele num: 115140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2422C>T
  hgvsp: ENSP00000442645.1:p.Arg808Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3500C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.17C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3001C>T
  hgvsp: ENSP00000364543.2:p.Arg1001Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.374C>T
  hgvsp: ENSP00000420332.1:p.Arg126Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+9C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2373C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.562C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9018
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3388
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg1001Trp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

6-31936248-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936248
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936248
    reference: chr 6
allele count: 2
allele frequency: 1.737166681143056e-5
allele num: 115130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.563G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2374G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3002G>A
  hgvsp: ENSP00000364543.2:p.Arg1001Gln
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3501G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.18G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.375G>A
  hgvsp: ENSP00000420332.1:p.Arg126Gln
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2423G>A
  hgvsp: ENSP00000442645.1:p.Arg808Gln
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+10G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3670
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg1001Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

6-31936253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936253
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936253
    reference: chr 6
allele count: 2
allele frequency: 1.737861040631191e-5
allele num: 115084
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.2C>T
  hgvsp: ENSP00000417586.1:p.Arg2Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3506C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.23C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.380C>T
  hgvsp: ENSP00000420332.1:p.Arg128Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2379C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2428C>T
  hgvsp: ENSP00000442645.1:p.Arg810Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+15C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.568C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3007C>T
  hgvsp: ENSP00000364543.2:p.Arg1003Trp
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg1003Trp
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

6-31936254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936254
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936254
    reference: chr 6
allele count: 1
allele frequency: 8.693988976021978e-6
allele num: 115022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.3G>A
  hgvsp: ENSP00000417586.1:p.Arg2Gln
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+16G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.569G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3507G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2429G>A
  hgvsp: ENSP00000442645.1:p.Arg810Gln
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.381G>A
  hgvsp: ENSP00000420332.1:p.Arg128Gln
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3008G>A
  hgvsp: ENSP00000364543.2:p.Arg1003Gln
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2380G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.24G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8947
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3370
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg1003Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP

6-31936258-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936258
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936258
    reference: chr 6
allele count: 2
allele frequency: 1.740341106856944e-5
allele num: 114920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.28G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2433G>A
  hgvsp: ENST00000544581.1:c.2433G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.7G>A
  hgvsp: ENST00000491994.1:c.7G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2384G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.385G>A
  hgvsp: ENST00000483553.1:c.385G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+20G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3511G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.573G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3012G>A
  hgvsp: ENST00000375394.2:c.3012G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys1004Lys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

6-31936261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936261
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936261
    reference: chr 6
allele count: 1
allele frequency: 8.701099819017123e-6
allele num: 114928
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.31G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2436G>A
  hgvsp: ENST00000544581.1:c.2436G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3514G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.388G>A
  hgvsp: ENST00000483553.1:c.388G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.10G>A
  hgvsp: ENST00000491994.1:c.10G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2387G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3015G>A
  hgvsp: ENST00000375394.2:c.3015G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.576G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+23G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25761
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu1005Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-31936263-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936263
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936263
    reference: chr 6
allele count: 1
allele frequency: 8.703523186185769e-6
allele num: 114896
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3017A>C
  hgvsp: ENSP00000364543.2:p.Glu1006Ala
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2389A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.33A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.578A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.12A>C
  hgvsp: ENSP00000417586.1:p.Glu5Ala
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.390A>C
  hgvsp: ENSP00000420332.1:p.Glu131Ala
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2438A>C
  hgvsp: ENSP00000442645.1:p.Glu813Ala
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+25A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3516A>C
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu1006Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

6-31936265-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936265
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936265
    reference: chr 6
allele count: 1
allele frequency: 8.708373972411871e-6
allele num: 114832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2440G>T
  hgvsp: ENSP00000442645.1:p.Glu814Ter
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.580G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2391G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+27G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3518G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.35G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.14G>T
  hgvsp: ENSP00000417586.1:p.Glu6Ter
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.392G>T
  hgvsp: ENSP00000420332.1:p.Glu132Ter
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3019G>T
  hgvsp: ENSP00000364543.2:p.Glu1007Ter
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3345
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu1007Ter
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

6-31936266-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936266
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936266
    reference: chr 6
allele count: 1
allele frequency: 8.712471031033823e-6
allele num: 114778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.393A>T
  hgvsp: ENSP00000420332.1:p.Glu132Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2392A>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+28A>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.15A>T
  hgvsp: ENSP00000417586.1:p.Glu6Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2441A>T
  hgvsp: ENSP00000442645.1:p.Glu814Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3020A>T
  hgvsp: ENSP00000364543.2:p.Glu1007Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.36A>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.581A>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3519A>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu1007Val
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

6-31936280-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936280
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936280
    reference: chr 6
allele count: 1
allele frequency: 8.756260726419389e-6
allele num: 114204
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.50G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2406G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3034G>C
  hgvsp: ENSP00000364543.2:p.Ala1012Pro
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+42G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2455G>C
  hgvsp: ENSP00000442645.1:p.Ala819Pro
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.595G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.29G>C
  hgvsp: ENSP00000417586.1:p.Ala11Pro
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3533G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.407G>C
  hgvsp: ENSP00000420332.1:p.Ala137Pro
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12325
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala1012Pro
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

6-31936280-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936280
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936280
    reference: chr 6
allele count: 1
allele frequency: 8.756260726419389e-6
allele num: 114204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.29G>A
  hgvsp: ENSP00000417586.1:p.Ala11Thr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2406G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.595G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3034G>A
  hgvsp: ENSP00000364543.2:p.Ala1012Thr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.50G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3533G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.407G>A
  hgvsp: ENSP00000420332.1:p.Ala137Thr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2455G>A
  hgvsp: ENSP00000442645.1:p.Ala819Thr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+42G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala1012Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

6-31936281-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936281
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936281
    reference: chr 6
allele count: 1
allele frequency: 8.759328685049578e-6
allele num: 114164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2456C>T
  hgvsp: ENSP00000442645.1:p.Ala819Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+43C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.408C>T
  hgvsp: ENSP00000420332.1:p.Ala137Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3534C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.51C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.30C>T
  hgvsp: ENSP00000417586.1:p.Ala11Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2407C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3035C>T
  hgvsp: ENSP00000364543.2:p.Ala1012Val
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.596C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala1012Val
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum

6-31936287-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936287
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936287
    reference: chr 6
allele count: 1
allele frequency: 8.798479622721194e-6
allele num: 113656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2413G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+49G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.57G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3041G>A
  hgvsp: ENSP00000364543.2:p.Cys1014Tyr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2462G>A
  hgvsp: ENSP00000442645.1:p.Cys821Tyr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.36G>A
  hgvsp: ENSP00000417586.1:p.Cys13Tyr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.602G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.414G>A
  hgvsp: ENSP00000420332.1:p.Cys139Tyr
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3540G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10895
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys1014Tyr
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-31936288-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936288
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936288
    reference: chr 6
allele count: 3
allele frequency: 2.642007926023778e-5
allele num: 113550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3541T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3042T>C
  hgvsp: ENST00000375394.2:c.3042T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+50T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2414T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2463T>C
  hgvsp: ENST00000544581.1:c.2463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.37T>C
  hgvsp: ENST00000491994.1:c.37T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.415T>C
  hgvsp: ENST00000483553.1:c.415T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.603T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.58T>C
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3465
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys1014Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

6-31936296-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936296
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936295
    reference: chr 6
allele count: 3
allele frequency: 2.662312306982358e-5
allele num: 112684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3554delC
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3055delC
  hgvsp: ENSP00000364543.2:p.Arg1019ValfsTer7
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+63delC
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.428delC
  hgvsp: ENSP00000420332.1:p.Arg144ValfsTer20
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.616delC
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2476delC
  hgvsp: ENSP00000442645.1:p.Arg826ValfsTer7
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.50delC
  hgvsp: ENSP00000417586.1:p.Arg18ValfsTer7
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2427delC
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.71delC
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9945
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3081
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8026
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg1019ValfsTer7
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: GC
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

6-31936297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936297
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936297
    reference: chr 6
allele count: 1
allele frequency: 8.891734243846919e-6
allele num: 112464
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+59C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2472C>T
  hgvsp: ENST00000544581.1:c.2472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.46C>T
  hgvsp: ENST00000491994.1:c.46C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3051C>T
  hgvsp: ENST00000375394.2:c.3051C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.424C>T
  hgvsp: ENST00000483553.1:c.424C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.612C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2423C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3550C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.67C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22403
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3069
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser1017Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-31936312-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936312
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936312
    reference: chr 6
allele count: 1
allele frequency: 8.972633467922835e-6
allele num: 111450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.12C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.61C>A
  hgvsp: ENST00000491994.1:c.61C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+74C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3066C>A
  hgvsp: ENST00000375394.2:c.3066C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.439C>A
  hgvsp: ENST00000483553.1:c.439C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3565C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.82C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2487C>A
  hgvsp: ENST00000544581.1:c.2487C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.627C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2438C>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8072
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala1022Ala
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ

6-31936312-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936312
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936312
    reference: chr 6
allele count: 1
allele frequency: 8.972633467922835e-6
allele num: 111450
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.61C>G
  hgvsp: ENST00000491994.1:c.61C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.12C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.627C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3565C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2487C>G
  hgvsp: ENST00000544581.1:c.2487C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2438C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.439C>G
  hgvsp: ENST00000483553.1:c.439C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+74C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3066C>G
  hgvsp: ENST00000375394.2:c.3066C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.82C>G
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13372
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4156
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala1022Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

6-31936323-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936323
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936323
    reference: chr 6
allele count: 1
allele frequency: 9.029508433560877e-6
allele num: 110748
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+8C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+8C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.442+8C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3568+8C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+85C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+8C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+8C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+8C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+8C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+8C>G
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 9.25e1
  variant carriers: 0
hgvs: c.3069+8C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

6-31936337-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936337
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936337
    reference: chr 6
allele count: 13
allele frequency: 1.182119084857964e-4
allele num: 109972
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+22C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+99C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+22C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3568+22C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+22C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+22C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+22C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+22C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.442+22C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+22C>G
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7880
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14008
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14670
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

6-31936339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936339
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936339
    reference: chr 6
allele count: 1
allele frequency: 9.10365420679861e-6
allele num: 109846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+24C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+24C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+24C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+24C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+24C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+24C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+24C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.442+24C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+101C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3568+24C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-31936349-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936349
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936349
    reference: chr 6
allele count: 3
allele frequency: 2.737226277372263e-5
allele num: 109600
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+34G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+34G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3568+34G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+34G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+34G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+34G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.442+34G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+34G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+111G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+34G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15822
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

6-31936349-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936349
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936349
    reference: chr 6
allele count: 4
allele frequency: 3.649635036496351e-5
allele num: 109600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3568+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.442+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+34G>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+111G>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12766
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15822
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-31936371-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936371
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936371
    reference: chr 6
allele count: 1
allele frequency: 9.097194425239256e-6
allele num: 109924
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+133C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+56C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+56C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+56C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+56C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+56C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+56C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-29C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-29C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+56C>G
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3119
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

6-31936380-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936380
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936380
    reference: chr 6
allele count: 1
allele frequency: 9.025433672087943e-6
allele num: 110798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-20A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+65A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+65A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+65A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-20A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+65A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+65A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+65A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+65A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+142A>G
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25592
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

6-31936381-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936381
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936381
    reference: chr 6
allele count: 1
allele frequency: 9.022990579997834e-6
allele num: 110828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+143C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+66C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+66C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+66C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+66C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-19C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-19C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+66C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+66C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+66C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS

6-31936382-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936382
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936382
    reference: chr 6
allele count: 18
allele frequency: 1.622118486743687e-4
allele num: 110966
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+67T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+67T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+67T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+67T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+144T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-18T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-18T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+67T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+67T>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+67T>G
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14419
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21506
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7113
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP

6-31936385-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936385
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936385
    reference: chr 6
allele count: 1
allele frequency: 8.995879887011749e-6
allele num: 111162
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+70C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+70C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+70C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+70C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-15C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-15C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+70C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+70C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+147C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+70C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14693
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

6-31936386-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936386
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936386
    reference: chr 6
allele count: 892
allele frequency: 8.0192750287687e-3
allele num: 111232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+71C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+71C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+71C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-14C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+71C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-14C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+71C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+148C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+71C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+71C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21785
  bin: 2.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 3.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 3.25e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 4.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 1.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14827
  bin: 2.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 7062
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3436
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 11
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

6-31936387-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936387
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936387
    reference: chr 6
allele count: 2
allele frequency: 1.790221808482071e-5
allele num: 111718
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-13G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.630+72G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2490+72G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.64+72G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3069+72G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-13G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.85+72G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.15+72G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2441+72G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+149G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22328
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15100
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

6-31936390-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936390
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936390
    reference: chr 6
allele count: 1
allele frequency: 8.878944471081278e-6
allele num: 112626
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-73C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-73C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-73C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+152C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-73C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-73C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-73C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-73C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-10C>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-10C>G
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23122
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15531
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2523
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3541
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/6-31936391-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936391
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936391
    reference: chr 6
allele count: 5
allele frequency: 4.430267588162325e-5
allele num: 112860
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-72C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-72C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-72C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-72C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-72C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-72C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-9C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-72C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-9C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+153C>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8132
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7841
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/6-31936398-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936398
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936398
    reference: chr 6
allele count: 1
allele frequency: 8.760709967935801e-6
allele num: 114146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-65A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-65A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+160A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3569-2A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-65A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-65A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.443-2A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-65A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-65A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-65A>C
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8538
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3517
  bin: 7.25e1
  variant carriers: 0
hgvs: n.3569-2A>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/6-31936411-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936411
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936411
    reference: chr 6
allele count: 1
allele frequency: 8.671221948596997e-6
allele num: 115324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-52A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-52A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-52A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-52A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.454A>C
  hgvsp: ENST00000483553.1:c.454A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-52A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-52A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+173A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3580A>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-52A>C
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser152Ser
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-31936417-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936417
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936417
    reference: chr 6
allele count: 1
allele frequency: 8.654412019247412e-6
allele num: 115548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-46C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-46C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-46C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-46C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-46C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.460C>A
  hgvsp: ENSP00000420332.1:p.His154Gln
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3586C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+179C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-46C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-46C>A
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His154Gln
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

6-31936425-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936425
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936425
    reference: chr 6
allele count: 1
allele frequency: 8.637368711995577e-6
allele num: 115776
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-38A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-38A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+187A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.468A>G
  hgvsp: ENST00000483553.1:c.468A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-38A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-38A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-38A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3594A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-38A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-38A>G
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ter157Ter
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

6-31936435-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936435
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936435
    reference: chr 6
allele count: 2
allele frequency: 1.724227115195614e-5
allele num: 115994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-28G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3604G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*9G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-28G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-28G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+197G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-28G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-28G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-28G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-28G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31312
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3787
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

6-31936441-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936441
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936441
    reference: chr 6
allele count: 3
allele frequency: 2.585404529628736e-5
allele num: 116036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*15G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-22G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3610G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-22G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-22G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+203G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-22G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-22G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-22G>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-22G>C
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

6-31936446-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936446
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936446
    reference: chr 6
allele count: 3
allele frequency: 2.584869894881958e-5
allele num: 116060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-17C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-17C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-17C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*20C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-17C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-17C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3615C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+208C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-17C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-17C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3795
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

6-31936447-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936447
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936447
    reference: chr 6
allele count: 1
allele frequency: 8.615490652192642e-6
allele num: 116070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+209G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-16G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-16G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-16G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*21G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-16G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3616G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-16G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-16G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-16G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8548
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

6-31936451-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936451
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936451
    reference: chr 6
allele count: 67
allele frequency: 5.771682574687296e-4
allele num: 116084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-12G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-12G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-12G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3620G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+213G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-12G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*25G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-12G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-12G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-12G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31362
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

6-31936456-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936456
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936456
    reference: chr 6
allele count: 1
allele frequency: 8.614451604010888e-6
allele num: 116084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3625T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-7T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*30T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-7T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-7T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+218T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-7T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-7T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-7T>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-7T>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.25e1
  variant carriers: 0
hgvs: c.3070-7T>A
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

6-31936456-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936456
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936456
    reference: chr 6
allele count: 430
allele frequency: 3.704214189724682e-3
allele num: 116084
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-7T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+218T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-7T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-7T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-7T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3625T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*30T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-7T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-7T>C
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-7T>C
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 16601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 8.75e1
  variant carriers: 0
hgvs: c.3070-7T>C
num of homozygotes: 18
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/6-31936457-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936457
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936457
    reference: chr 6
allele count: 1
allele frequency: 8.614303189015041e-6
allele num: 116086
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3070-6C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3626C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.631-6C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.86-6C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2442-6C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.16-6C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.139+219C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2491-6C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.65-6C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*31C>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16617
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
hgvs: c.3070-6C>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/6-31936466-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936466
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936466
    reference: chr 6
allele count: 2
allele frequency: 1.722771594941943e-5
allele num: 116092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2494C>A
  hgvsp: ENSP00000442645.1:p.Leu832Met
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*40C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.19C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.634C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.140-212C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.68C>A
  hgvsp: ENSP00000417586.1:p.Leu24Met
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2445C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3073C>A
  hgvsp: ENSP00000364543.2:p.Leu1025Met
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.89C>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3635C>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu1025Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

6-31936470-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936470
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936470
    reference: chr 6
allele count: 1
allele frequency: 8.613709580167795e-6
allele num: 116094
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.140-208A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.638A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.23A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3077A>G
  hgvsp: ENSP00000364543.2:p.Lys1026Arg
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.72A>G
  hgvsp: ENSP00000417586.1:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3639A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2498A>G
  hgvsp: ENSP00000442645.1:p.Lys833Arg
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2449A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.93A>G
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*44A>G
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys1026Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

6-31936475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936475
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936475
    reference: chr 6
allele count: 5
allele frequency: 4.306780595369349e-5
allele num: 116096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.28C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.98C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.643C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3082C>T
  hgvsp: ENSP00000364543.2:p.Arg1028Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.140-203C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3644C>T
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.77C>T
  hgvsp: ENSP00000417586.1:p.Arg27Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2503C>T
  hgvsp: ENSP00000442645.1:p.Arg835Trp
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2454C>T
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg1028Trp
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

6-31936477-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936477
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936477
    reference: chr 6
allele count: 165
allele frequency: 1.421213113059656e-3
allele num: 116098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000485349
  gene symbol: SKIV2L
  hgvsc: ENST00000485349.1:n.100G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000364543
  ensembl transcript: ENST00000375394
  gene symbol: SKIV2L
  hgvsc: ENST00000375394.2:c.3084G>A
  hgvsp: ENST00000375394.2:c.3084G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000470453
  gene symbol: SKIV2L
  hgvsc: ENST00000470453.1:n.30G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000417586
  ensembl transcript: ENST00000491994
  gene symbol: SKIV2L
  hgvsc: ENST00000491994.1:c.79G>A
  hgvsp: ENST00000491994.1:c.79G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420470
  ensembl transcript: ENST00000474839
  gene symbol: SKIV2L
  hgvsc: ENST00000474839.1:c.*2456G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000484835
  gene symbol: SKIV2L
  hgvsc: ENST00000484835.1:n.645G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000442645
  ensembl transcript: ENST00000544581
  gene symbol: SKIV2L
  hgvsc: ENST00000544581.1:c.2505G>A
  hgvsp: ENST00000544581.1:c.2505G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000471818
  gene symbol: SKIV2L
  hgvsc: ENST00000471818.1:n.140-201G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204351
  ensembl protein: ENSP00000420332
  ensembl transcript: ENST00000483553
  gene symbol: SKIV2L
  hgvsc: ENST00000483553.1:c.*51G>A
  variant of: http://identifiers.org/hgnc/10898
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204351
  ensembl transcript: ENST00000465703
  gene symbol: SKIV2L
  hgvsc: ENST00000465703.1:n.3646G>A
  variant of: http://identifiers.org/hgnc/10898
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16553
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24458
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 9255
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 31044
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg1028Arg
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

6-31936481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31936481
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31936481
    reference: chr 6
allele count: 1
allele frequency: 8.614303189015041e-6
allele num: 116086
alternate allele: T
canonical: true
consequence: stop gained
filter: PASS
hgvs: p.Arg1030Ter
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3408
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3699
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9107
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.733624454148471e-5
allele num: 11450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.535e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.035e0

QD
type: SiteQuality
SIO_000300: 1.074e1

FS
type: SiteQuality
SIO_000300: 2.248e0

VQSLOD
type: SiteQuality
SIO_000300: 5.18e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

DP
type: SiteQuality
SIO_000300: 1.682475e6

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583481124904991e-5
allele num: 63152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

FS
type: SiteQuality
SIO_000300: 1.652e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
type: SiteQuality
SIO_000300: 1.538e1

DP
type: SiteQuality
SIO_000300: 1.683788e6

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9126
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2159
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3702
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33680
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583481124904991e-5
allele num: 63152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.152e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

QD
type: SiteQuality
SIO_000300: 1.831e1

DP
type: SiteQuality
SIO_000300: 1.684088e6

MQRankSum
type: SiteQuality
SIO_000300: 9.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.857e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.206e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-2

GenotypeQuality
all individuals: 322
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2162
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3699
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3365
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583380834758376e-5
allele num: 63156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.673e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.398e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 2.152e0

DP
type: SiteQuality
SIO_000300: 1.684354e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.2e0

QD
type: SiteQuality
SIO_000300: 1.831e1

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 9.75e1
variant carriers: 101

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9128
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33684
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3695
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.366049598323437e-4
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

African
type: Population
allele count: 91
allele frequency: 1.038338658146965e-2
allele num: 8764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.332721170286872e-5
allele num: 63164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.153088850603002e-5
allele num: 16252
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

DP
type: SiteQuality
SIO_000300: 1.693813e6

QD
type: SiteQuality
SIO_000300: 1.191e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1008
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582929686263336e-5
allele num: 63174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.039e0

QD
type: SiteQuality
SIO_000300: 1.24e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

MQ
type: SiteQuality
SIO_000300: 5.887e1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-2

DP
type: SiteQuality
SIO_000300: 1.678878e6

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9152
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583029919265474e-5
allele num: 63170
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 3.01e0

FS
type: SiteQuality
SIO_000300: 1.2757e1

DP
type: SiteQuality
SIO_000300: 1.679556e6

MQ
type: SiteQuality
SIO_000300: 5.357e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.125e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.279e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3709
bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8868
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63182
num of homozygotes: 0

South Asian
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allele frequency: 6.149305128520478e-5
allele num: 16262
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.277e0

FS
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MQRankSum
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SIO_000300: 5.03e-1

BaseQRankSum
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SIO_000300: -1.911e0

VQSLOD
type: SiteQuality
SIO_000300: -3.28e0

ReadPosRankSum
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SIO_000300: 2.64e0

QD
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SIO_000300: 1.239e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQ
type: SiteQuality
SIO_000300: 5.985e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 12
allele frequency: 1.047668936616029e-3
allele num: 11454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8900
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 9.50058586946195e-5
allele num: 63154
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

FS
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
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DP
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InbreedingCoeff
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SIO_000300: 1.7e-3

MQRankSum
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BaseQRankSum
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SIO_000300: 9.18e-1

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.2e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8920
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.148548942449582e-5
allele num: 16264
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63138
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 1.142e1

MQRankSum
type: SiteQuality
SIO_000300: 4.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.078e0

FS
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SIO_000300: 5.735e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.98e-1

DP
type: SiteQuality
SIO_000300: 1.678521e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8918
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.148548942449582e-5
allele num: 16264
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.119e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.266e0

FS
type: SiteQuality
SIO_000300: 1.177e0

DP
type: SiteQuality
SIO_000300: 1.67793e6

QD
type: SiteQuality
SIO_000300: 9.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 1
allele frequency: 6.148548942449582e-5
allele num: 16264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.529999999999999e0

DP
type: SiteQuality
SIO_000300: 1.677817e6

VQSLOD
type: SiteQuality
SIO_000300: -7.215e-1

QD
type: SiteQuality
SIO_000300: 9.67e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.23e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.109455732716265e-4
allele num: 63094
num of homozygotes: 0

African
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allele frequency: 3.361721201255042e-4
allele num: 8924
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South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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ClippingRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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allele frequency: 1.119570085087326e-4
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European (Non-Finnish)
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allele count: 5
allele frequency: 7.925186241876684e-5
allele num: 63090
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Latino
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East Asian
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MQ
type: SiteQuality
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DP
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ClippingRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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East Asian
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Latino
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Other
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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FS
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QD
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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Other
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African
type: Population
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European (Non-Finnish)
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South Asian
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European (Finnish)
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.003e-1

FS
type: SiteQuality
SIO_000300: 6.045e0

DP
type: SiteQuality
SIO_000300: 1.675148e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.639e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.587e0

MQRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.2e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3420
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588310038119441e-5
allele num: 62960
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17426021606388e-4
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.148548942449582e-5
allele num: 16264
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.652e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

DP
type: SiteQuality
SIO_000300: 1.674764e6

FS
type: SiteQuality
SIO_000300: 2.351e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.84e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2162
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.148548942449582e-5
allele num: 16264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62934
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.9404e1

QD
type: SiteQuality
SIO_000300: 1.593e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.343e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

DP
type: SiteQuality
SIO_000300: 1.674368e6

VQSLOD
type: SiteQuality
SIO_000300: -2.521e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.55e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 64
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.129177958446251e-4
allele num: 8856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591343093570974e-5
allele num: 62840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

QD
type: SiteQuality
SIO_000300: 1.48e1

FS
type: SiteQuality
SIO_000300: 4.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.275e0

DP
type: SiteQuality
SIO_000300: 1.671447e6

VQSLOD
type: SiteQuality
SIO_000300: 3.22e0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591545709192768e-5
allele num: 62832
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

DP
type: SiteQuality
SIO_000300: 1.670563e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.14e-1

FS
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: 8.36e-1

QD
type: SiteQuality
SIO_000300: 1.346e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 78
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9088
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.184307731499172e-5
allele num: 62808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8824
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 1.669486e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.005e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3673
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8748
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.739730816290858e-5
allele num: 11442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.378364587319811e-5
allele num: 62712
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.698144233027954e-4
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.964e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

VQSLOD
type: SiteQuality
SIO_000300: 3.43e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.323e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.143118427069044e-4
allele num: 8748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.594591146829953e-5
allele num: 62712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.662341e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.584e0

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

FS
type: SiteQuality
SIO_000300: 3.808e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.87e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 1.375e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.149305128520478e-5
allele num: 16262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.59550705214117e-5
allele num: 62676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

FS
type: SiteQuality
SIO_000300: 5.611e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

VQSLOD
type: SiteQuality
SIO_000300: 5.84e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.659695e6

GenotypeQuality
all individuals: 3651
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 416
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 86
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GenotypeQuality
all individuals: 39
bin: 4.25e1
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GenotypeQuality
all individuals: 1093
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.596474983237013e-5
allele num: 62638
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 62582
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.148105625717566e-4
allele num: 8710
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 1.5220700152207e-4
allele num: 6570
num of homozygotes: 0

DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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VQSLOD
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.597648261758691e-5
allele num: 62592
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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BaseQRankSum
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DP
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ReadPosRankSum
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MQRankSum
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.150218541522889e-4
allele num: 8694
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62574
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e0

MQ
type: SiteQuality
SIO_000300: 5.664e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 1.022e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.151574803149606e-5
allele num: 16256
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8680
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62540
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.570000000000001e-1

QD
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ReadPosRankSum
type: SiteQuality
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DP
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VQSLOD
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 3.004e0

MQRankSum
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MQ
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InbreedingCoeff
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SIO_000300: -2.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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African
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South Asian
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allele num: 16256
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 62504
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Other
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European (Finnish)
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allele frequency: 0.0e0
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QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 8606
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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Other
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African
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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FS
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BaseQRankSum
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.610617188506636e-5
allele num: 62088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 1.962e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.05e-1

DP
type: SiteQuality
SIO_000300: 1.626123e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.859e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.618751618751619e-5
allele num: 61776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.585e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.513e0

DP
type: SiteQuality
SIO_000300: 1.607776e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 312
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.86223662884927e-5
allele num: 61700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 3.512e0

DP
type: SiteQuality
SIO_000300: 1.604483e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.406e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

QD
type: SiteQuality
SIO_000300: 1.518e1

GenotypeQuality
all individuals: 2859
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.667140825035562e-4
allele num: 11248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.25e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.529999999999999e0

DP
type: SiteQuality
SIO_000300: 1.565614e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e-1

GenotypeQuality
all individuals: 730
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1053
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variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.637304342131115e-5
allele num: 61076
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.553078e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.559e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.712e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

GenotypeQuality
all individuals: 202
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.652674026574998e-5
allele num: 60508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.296e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.321e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

DP
type: SiteQuality
SIO_000300: 1.482862e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.202501202501203e-4
allele num: 8316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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BaseQRankSum
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QD
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.482862e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.664059639897494e-5
allele num: 60094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11014
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16112
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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FS
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 8.66e-1

MQRankSum
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19656
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GenotypeQuality
all individuals: 2283
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7946
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.213886865744113e-4
allele num: 8238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.012207391508485e-4
allele num: 59636
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 2.479e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

DP
type: SiteQuality
SIO_000300: 1.399441e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

QD
type: SiteQuality
SIO_000300: 1.512e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.678697330871244e-5
allele num: 59570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.464e1

MQRankSum
type: SiteQuality
SIO_000300: 7.98e-1

DP
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -1.179e0

VQSLOD
type: SiteQuality
SIO_000300: 2.34e-1

FS
type: SiteQuality
SIO_000300: 2.557e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.756339581036384e-4
allele num: 10884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59396
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.52e-1

FS
type: SiteQuality
SIO_000300: 4.052e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.305e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

DP
type: SiteQuality
SIO_000300: 1.388057e6

QD
type: SiteQuality
SIO_000300: 1.297e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 911
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variant carriers: 0

GenotypeQuality
all individuals: 3255
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.187798603454613e-5
allele num: 10884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.050845174759243e-5
allele num: 59396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.305e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 4.052e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.388057e6

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

QD
type: SiteQuality
SIO_000300: 1.297e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.52e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.261670451678022e-4
allele num: 7926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.491e1

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.421352e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.185395922238028e-4
allele num: 8436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16108
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 2.78e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -4.246e-1

DP
type: SiteQuality
SIO_000300: 1.457828e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16110
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.25344697919278e-4
allele num: 7978
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.157e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 18

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.825046530178144e-4
allele num: 60176
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.089256498818396e-5
allele num: 11002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.204243702692642e-5
allele num: 16118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60330
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.861e1

MQRankSum
type: SiteQuality
SIO_000300: -8.06e-1

DP
type: SiteQuality
SIO_000300: 1.480146e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.361e0

FS
type: SiteQuality
SIO_000300: 1.005e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-1

QD
type: SiteQuality
SIO_000300: 5.45e0

VQSLOD
type: SiteQuality
SIO_000300: -2.285e0

GenotypeQuality
all individuals: 478
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 577
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 3298
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1113
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3982
bin: 9.75e1
variant carriers: 874

GenotypeQuality
all individuals: 672
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1315
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1063
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 26745
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 7.25e1
variant carriers: 1

South Asian
type: Population
allele count: 314
allele frequency: 1.947166067220638e-2
allele num: 16126
num of homozygotes: 7

East Asian
type: Population
allele count: 59
allele frequency: 7.382382382382383e-3
allele num: 7992
num of homozygotes: 0

Latino
type: Population
allele count: 104
allele frequency: 9.433962264150943e-3
allele num: 11024
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 346
allele frequency: 5.729235660352365e-3
allele num: 60392
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 35
allele frequency: 5.491057420771886e-3
allele num: 6374
num of homozygotes: 0

African
type: Population
allele count: 25
allele frequency: 2.950200613641728e-3
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 9
allele frequency: 1.058823529411765e-2
allele num: 850
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.96e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

FS
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.576e1

DP
type: SiteQuality
SIO_000300: 1.508859e6

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

GenotypeQuality
all individuals: 101
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 845
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3642
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3171
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2981
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.648206751054852e-5
allele num: 60672
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.195019204559534e-5
allele num: 16142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8062
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

QD
type: SiteQuality
SIO_000300: 1.644e1

DP
type: SiteQuality
SIO_000300: 1.511103e6

FS
type: SiteQuality
SIO_000300: 1.009e0

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 404
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3838
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3314
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28414
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7764
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.633826749011535e-5
allele num: 61206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.154e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.209e0

DP
type: SiteQuality
SIO_000300: 1.531767e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.04e1

GenotypeQuality
all individuals: 2569
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3863
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3353
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.25955865575801e-5
allele num: 61358
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.852766798418972e-4
allele num: 16192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0087e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.537722e6

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.655e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3606
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1394
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30569
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.608855138683313e-5
allele num: 62156
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.171e0

DP
type: SiteQuality
SIO_000300: 1.566303e6

VQSLOD
type: SiteQuality
SIO_000300: -2.254e-1

QD
type: SiteQuality
SIO_000300: 1.323e1

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31109
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3720
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2957
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3703
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8435
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.592458118351487e-5
allele num: 62796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.28e-1

FS
type: SiteQuality
SIO_000300: 6.876e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.301e0

DP
type: SiteQuality
SIO_000300: 1.592557e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

QD
type: SiteQuality
SIO_000300: 1.558e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3749
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2997
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.111111111111111e-4
allele num: 9000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62924
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.59728e6

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.693e1

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.722e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.407e0

GenotypeQuality
all individuals: 287
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31188
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3743
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8510
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3777
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63058
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.104240282685512e-4
allele num: 9056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e0

QD
type: SiteQuality
SIO_000300: 1.434e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

FS
type: SiteQuality
SIO_000300: 5.32e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.60208e6

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.166160081053698e-5
allele num: 63168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

QD
type: SiteQuality
SIO_000300: 1.115e1

DP
type: SiteQuality
SIO_000300: 1.605669e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

FS
type: SiteQuality
SIO_000300: 6.359e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.617e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.280122457905095e-4
allele num: 9146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-2

FS
type: SiteQuality
SIO_000300: 4.469e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

DP
type: SiteQuality
SIO_000300: 1.60642e6

MQ
type: SiteQuality
SIO_000300: 5.939e1

QD
type: SiteQuality
SIO_000300: 1.131e1

GenotypeQuality
all individuals: 31368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3050
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.746384836882575e-5
allele num: 63206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.606863e6

FS
type: SiteQuality
SIO_000300: 6.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.064e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
type: SiteQuality
SIO_000300: 6.78e-1

GenotypeQuality
all individuals: 4391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1411
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
all individuals: 620
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 1555
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 3796
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63212
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.092657342657343e-4
allele num: 9152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.689e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

FS
type: SiteQuality
SIO_000300: 1.043e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e0

MQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

QD
type: SiteQuality
SIO_000300: 8.32e0

DP
type: SiteQuality
SIO_000300: 1.60719e6

GenotypeQuality
all individuals: 1410
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 3860
bin: 9.75e1
variant carriers: 67

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 40
allele frequency: 6.326911518142418e-4
allele num: 63222
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.529051987767584e-3
allele num: 9156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.135371179039301e-3
allele num: 11450
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.611848e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

FS
type: SiteQuality
SIO_000300: 6.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.055e0

QD
type: SiteQuality
SIO_000300: 1.202e1

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.5e0
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GenotypeQuality
all individuals: 618
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 4359
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581727879535605e-5
allele num: 63222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.24e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

FS
type: SiteQuality
SIO_000300: 1.122e0

QD
type: SiteQuality
SIO_000300: 1.385e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.640704e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 412

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 412
allele frequency: 2.533202164289228e-2
allele num: 16264
num of homozygotes: 18

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.908639397678023e-5
allele num: 63222
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.349072116513977e-4
allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.608294930875576e-3
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.366812227074236e-4
allele num: 11450
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.18435998252512e-4
allele num: 9156
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.640704e6

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
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SIO_000300: -2.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

FS
type: SiteQuality
SIO_000300: 1.122e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.24e-2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3744
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GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4375
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3051
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581677843856763e-5
allele num: 63224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

DP
type: SiteQuality
SIO_000300: 1.620809e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

FS
type: SiteQuality
SIO_000300: 3.742e0

MQRankSum
type: SiteQuality
SIO_000300: 6.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.968e0

QD
type: SiteQuality
SIO_000300: 1.382e1

GenotypeQuality
all individuals: 3050
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4376
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8501
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3744
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31141
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.149305128520478e-5
allele num: 16262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63232
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.091941471937104e-4
allele num: 9158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.084e1

DP
type: SiteQuality
SIO_000300: 1.621005e6

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQRankSum
type: SiteQuality
SIO_000300: 6.79e-1

FS
type: SiteQuality
SIO_000300: 3.602e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1420
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3050
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581427712939242e-5
allele num: 63234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.620871e6

VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

FS
type: SiteQuality
SIO_000300: 3.574e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

QD
type: SiteQuality
SIO_000300: 1.271e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4102
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8492
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.075030750307503e-4
allele num: 16260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63236
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

FS
type: SiteQuality
SIO_000300: 5.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.181e1

DP
type: SiteQuality
SIO_000300: 1.621368e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 4360
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4258
bin: 9.75e1
variant carriers: 165

GenotypeQuality
all individuals: 1568
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

African
type: Population
allele count: 136
allele frequency: 1.485040401834462e-2
allele num: 9158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 27
allele frequency: 2.358490566037736e-3
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.162655365444827e-5
allele num: 63238
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.519e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

DP
type: SiteQuality
SIO_000300: 1.633612e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

MQRankSum
type: SiteQuality
SIO_000300: 3.51e-1

QD
type: SiteQuality
SIO_000300: 1.096e1