8-29923653-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923653
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923653
    reference: chr 8
allele count: 12
allele frequency: 9.894785448068868e-5
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.844C>T
  hgvsp: ENSP00000429538.1:p.Ala282Val
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.329C>T
  hgvsp: ENSP00000441723.1:p.Ala110Val
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*718C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.280C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*552C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.453C>T
  hgvsp: ENSP00000427769.1:p.Ala152Val
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2240C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.845C>T
  hgvsp: ENSP00000256255.6:p.Ala282Val
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-70C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.329C>T
  hgvsp: ENSP00000441351.1:p.Ala110Val
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala282Val
num of homozygotes: 1
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

8-29923657-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923657
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923658
    reference: chr 8
allele count: 228
allele frequency: 1.883270282325343e-3
allele num: 121066
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-3_*716-2insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-3_843-2insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-3_*550-2insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-3_842-2insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-3_278-2insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-75_537-74insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-3_327-2insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-3_327-2insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-3_451-2insT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2245_*408-2244insT
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 39043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 6
hgvs: c.843-3_843-2insT
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

8-29923657-T-TATTGCTGCCAAACAAATATCCTAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923657
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923681
    reference: chr 8
allele count: 15
allele frequency: 1.238993606792989e-4
allele num: 121066
alternate allele: TATTGCTGCCAAACAAATATCCTAG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

8-29923657-T-TATTGCTGCCAAACAAATATCCTAGTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923657
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923683
    reference: chr 8
allele count: 47
allele frequency: 3.882179967951366e-4
allele num: 121066
alternate allele: TATTGCTGCCAAACAAATATCCTAGTA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

8-29923657-T-TATTGCTGCCAAACAAATATCCTAGTATTCCACCAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923657
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923692
    reference: chr 8
allele count: 44
allele frequency: 3.634381246592768e-4
allele num: 121066
alternate allele: TATTGCTGCCAAACAAATATCCTAGTATTCCACCAG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 39043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10844
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

8-29923657-T-TATTGCTGCCAAACAAATATCCTAGTATTCCACCAGTTCCCAAGCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923657
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923702
    reference: chr 8
allele count: 42
allele frequency: 3.469182099020369e-4
allele num: 121066
alternate allele: TATTGCTGCCAAACAAATATCCTAGTATTCCACCAGTTCCCAAGCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4804
  bin: 9.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5575
  bin: 6.75e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum

8-29923657-T-TATTGCTGCCAAACAAATATCCTAGTATTCCACCAGTTCCCAAGCCTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923657
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923704
    reference: chr 8
allele count: 18
allele frequency: 1.486792328151587e-4
allele num: 121066
alternate allele: TATTGCTGCCAAACAAATATCCTAGTATTCCACCAGTTCCCAAGCCTG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 10844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5575
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

8-29923658-T-TTGCTGCCAAACAAATATCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923658
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923677
    reference: chr 8
allele count: 17
allele frequency: 1.447547683923706e-4
allele num: 117440
alternate allele: TTGCTGCCAAACAAATATCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 38959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
hgvs: c.843-4_843-3insGGATATTTGTTTGGCAGCA
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

8-29923659-T-TGCTGCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923659
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923665
    reference: chr 8
allele count: 42
allele frequency: 3.466605038132656e-4
allele num: 121156
alternate allele: TGCTGCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-5_*716-4insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-5_327-4insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-5_843-4insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-5_842-4insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-5_451-4insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-5_278-4insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-5_327-4insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-5_*550-4insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-77_537-76insGGCAGC
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38902
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 7.25e1
  variant carriers: 0
hgvs: c.843-5_843-4insGGCAGC
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

8-29923659-T-TGCTGCCAAACAAATATCCTAGTATTCCACCAGTTCCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923659
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923696
    reference: chr 8
allele count: 64
allele frequency: 5.282445772392618e-4
allele num: 121156
alternate allele: TGCTGCCAAACAAATATCCTAGTATTCCACCAGTTCCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

8-29923659-T-TGCTGCCAAACAAATATCCTAGTATTCCACCAGTTCCCAAGCCTGTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923659
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923706
    reference: chr 8
allele count: 20
allele frequency: 1.650764303872693e-4
allele num: 121156
alternate allele: TGCTGCCAAACAAATATCCTAGTATTCCACCAGTTCCCAAGCCTGTCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5111
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

8-29923659-T-TGCTGCCAAAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923659
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923669
    reference: chr 8
allele count: 17
allele frequency: 1.403149658291789e-4
allele num: 121156
alternate allele: TGCTGCCAAAC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 38902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
hgvs: c.843-5_843-4insGTTTGGCAGC
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

8-29923659-T-TGCTGCCAAACAAATATCCTAGTATTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923659
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923686
    reference: chr 8
allele count: 28
allele frequency: 2.31107002542177e-4
allele num: 121156
alternate allele: TGCTGCCAAACAAATATCCTAGTATTCC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43436
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

8-29923659-T-TGCTGCCAAACAAATATCCTAGTATTCCACC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923659
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923689
    reference: chr 8
allele count: 30
allele frequency: 2.47614645580904e-4
allele num: 121156
alternate allele: TGCTGCCAAACAAATATCCTAGTATTCCACC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 38902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5111
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 5536
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

8-29923660-A-AAACAAATATCCTAGTATTCCACCAGTTCCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923660
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923690
    reference: chr 8
allele count: 26
allele frequency: 2.209231187546734e-4
allele num: 117688
alternate allele: AAACAAATATCCTAGTATTCCACCAGTTCCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5508
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

8-29923663-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923663
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923663
    reference: chr 8
allele count: 5
allele frequency: 4.2165626581211e-5
allele num: 118580
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-8C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-8C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-8C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-8C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-8C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-8C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-80C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-8C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-8C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2250C>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
hgvs: c.843-8C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

8-29923664-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923664
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923664
    reference: chr 8
allele count: 5
allele frequency: 4.125616779708567e-5
allele num: 121194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-9C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-9C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-9C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-9C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2251C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-9C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-9C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-81C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-9C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-9C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43516
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

8-29923665-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923665
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923665
    reference: chr 8
allele count: 5
allele frequency: 4.221261650682156e-5
allele num: 118448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-10C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-10C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-82C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2252C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-10C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-10C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-10C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-10C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-10C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-10C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/8-29923666-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923666
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923666
    reference: chr 8
allele count: 1
allele frequency: 8.450656616019065e-6
allele num: 118334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-11T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-11T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-11T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-11T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-11T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2253T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-11T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-11T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-83T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-11T>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

8-29923667-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923667
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923667
    reference: chr 8
allele count: 1
allele frequency: 8.42516766083645e-6
allele num: 118692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-84A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-12A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-12A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-12A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-12A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-12A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-12A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-12A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2254A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-12A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

8-29923688-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923688
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923688
    reference: chr 8
allele count: 2
allele frequency: 1.675659371962867e-5
allele num: 119356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2275A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-105A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-33A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

8-29923696-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923696
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923696
    reference: chr 8
allele count: 1
allele frequency: 8.414533582403528e-6
allele num: 118842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-41C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-41C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-41C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-41C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-113C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-41C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-41C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-41C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-41C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2283C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

8-29923698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923698
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923698
    reference: chr 8
allele count: 3
allele frequency: 2.523595619038005e-5
allele num: 118878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.327-43G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.537-115G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2285G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.843-43G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*550-43G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.842-43G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.451-43G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.327-43G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.278-43G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*716-43G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/8-29924249-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924249
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924249
    reference: chr 8
allele count: 5
allele frequency: 4.131138872364333e-5
allele num: 121032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2836G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.450+44G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.326+44G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.842+44G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*715+44G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.277+44G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.536+44G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.326+44G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*549+44G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.841+44G>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32322
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

8-29924263-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924263
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924263
    reference: chr 8
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.277+30C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2850C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*715+30C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.326+30C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.326+30C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.841+30C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.842+30C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*549+30C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.450+30C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.536+30C>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32284
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

8-29924271-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924271
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924271
    reference: chr 8
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.326+22C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.277+22C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.842+22C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.326+22C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*549+22C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2858C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.841+22C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*715+22C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.450+22C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.536+22C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

8-29924271-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924271
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924271
    reference: chr 8
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.277+22C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.450+22C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*715+22C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*549+22C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.326+22C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.326+22C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2858C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.842+22C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.841+22C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.536+22C>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

8-29924273-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924273
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924273
    reference: chr 8
allele count: 1
allele frequency: 8.342370901810295e-6
allele num: 119870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*549+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.536+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.326+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*715+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.277+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.450+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.326+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2860C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.841+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.842+20C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9288
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

8-29924280-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924280
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924280
    reference: chr 8
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*549+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.326+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.450+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.842+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.326+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.536+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.841+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.277+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*715+13C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2867C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

8-29924293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924293
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924293
    reference: chr 8
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.277G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.841G>A
  hgvsp: ENSP00000429538.1:p.Arg281Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.326G>A
  hgvsp: ENSP00000441723.1:p.Arg109Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.326G>A
  hgvsp: ENSP00000441351.1:p.Arg109Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2865G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.536G>A
  hgvsp: ENSP00000428323.1:p.Arg179Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*715G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.450G>A
  hgvsp: ENSP00000427769.1:p.Arg151Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.842G>A
  hgvsp: ENSP00000256255.6:p.Arg281Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*549G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg281Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

8-29924294-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924294
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924294
    reference: chr 8
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.276A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2864A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.325A>G
  hgvsp: ENSP00000441723.1:p.Arg109Gly
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.449A>G
  hgvsp: ENSP00000427769.1:p.Arg151Gly
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.840A>G
  hgvsp: ENSP00000429538.1:p.Arg281Gly
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*548A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.841A>G
  hgvsp: ENSP00000256255.6:p.Arg281Gly
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.535A>G
  hgvsp: ENSP00000428323.1:p.Arg179Gly
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*714A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.325A>G
  hgvsp: ENSP00000441351.1:p.Arg109Gly
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg281Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

8-29924296-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924296
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924296
    reference: chr 8
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.447A>G
  hgvsp: ENSP00000427769.1:p.Asn150Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.839A>G
  hgvsp: ENSP00000256255.6:p.Asn280Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.533A>G
  hgvsp: ENSP00000428323.1:p.Asn178Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.323A>G
  hgvsp: ENSP00000441351.1:p.Asn108Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2862A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.838A>G
  hgvsp: ENSP00000429538.1:p.Asn280Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.274A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*546A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.323A>G
  hgvsp: ENSP00000441723.1:p.Asn108Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*712A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn280Ser
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/8-29924308-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924308
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924308
    reference: chr 8
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.311T>G
  hgvsp: ENSP00000441351.1:p.Leu104Trp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.311T>G
  hgvsp: ENSP00000441723.1:p.Leu104Trp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.826T>G
  hgvsp: ENSP00000429538.1:p.Leu276Trp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2850T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.827T>G
  hgvsp: ENSP00000256255.6:p.Leu276Trp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*700T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.262T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.435T>G
  hgvsp: ENSP00000427769.1:p.Leu146Trp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.521T>G
  hgvsp: ENSP00000428323.1:p.Leu174Trp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*534T>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu276Trp
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-29924349-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924349
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924349
    reference: chr 8
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.221G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.786G>C
  hgvsp: ENST00000256255.6:c.786G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.270G>C
  hgvsp: ENST00000545648.1:c.270G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.270G>C
  hgvsp: ENST00000536273.1:c.270G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*659G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2809G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.785G>C
  hgvsp: ENST00000521265.1:c.785G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.394G>C
  hgvsp: ENST00000518296.1:c.394G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*493G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.480G>C
  hgvsp: ENST00000523127.1:c.480G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly262Gly
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

8-29924349-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924349
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924349
    reference: chr 8
allele count: 3
allele frequency: 2.474716644944154e-5
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*659G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2809G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*493G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.785G>A
  hgvsp: ENST00000521265.1:c.785G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.480G>A
  hgvsp: ENST00000523127.1:c.480G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.394G>A
  hgvsp: ENST00000518296.1:c.394G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.786G>A
  hgvsp: ENST00000256255.6:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.270G>A
  hgvsp: ENST00000536273.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.270G>A
  hgvsp: ENST00000545648.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.221G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly262Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ

8-29924352-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924352
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924352
    reference: chr 8
allele count: 4
allele frequency: 3.299785513941594e-5
allele num: 121220
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.783A>G
  hgvsp: ENST00000256255.6:c.783A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2806A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.267A>G
  hgvsp: ENST00000536273.1:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.477A>G
  hgvsp: ENST00000523127.1:c.477A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.391A>G
  hgvsp: ENST00000518296.1:c.391A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*656A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.267A>G
  hgvsp: ENST00000545648.1:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.782A>G
  hgvsp: ENST00000521265.1:c.782A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*490A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.218A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro261Pro
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

8-29924368-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924368
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924368
    reference: chr 8
allele count: 2
allele frequency: 1.650246711883427e-5
allele num: 121194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.251A>G
  hgvsp: ENSP00000441351.1:p.Tyr84Cys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.251A>G
  hgvsp: ENSP00000441723.1:p.Tyr84Cys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.202A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.767A>G
  hgvsp: ENSP00000256255.6:p.Tyr256Cys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*474A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.375A>G
  hgvsp: ENSP00000427769.1:p.Tyr126Cys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*640A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.766A>G
  hgvsp: ENSP00000429538.1:p.Tyr256Cys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.461A>G
  hgvsp: ENSP00000428323.1:p.Tyr154Cys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2790A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr256Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

8-29924372-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924372
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924372
    reference: chr 8
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.371G>A
  hgvsp: ENSP00000427769.1:p.Gly125Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.763G>A
  hgvsp: ENSP00000256255.6:p.Gly255Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.198G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.247G>A
  hgvsp: ENSP00000441351.1:p.Gly83Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*636G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.247G>A
  hgvsp: ENSP00000441723.1:p.Gly83Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.762G>A
  hgvsp: ENSP00000429538.1:p.Gly255Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.457G>A
  hgvsp: ENSP00000428323.1:p.Gly153Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2786G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*470G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33759
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly255Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

8-29924377-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924377
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924377
    reference: chr 8
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*631A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*465A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.452A>G
  hgvsp: ENSP00000428323.1:p.Gln151Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.193A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.758A>G
  hgvsp: ENSP00000256255.6:p.Gln253Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.242A>G
  hgvsp: ENSP00000441351.1:p.Gln81Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.757A>G
  hgvsp: ENSP00000429538.1:p.Gln253Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.366A>G
  hgvsp: ENSP00000427769.1:p.Gln123Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2781A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.242A>G
  hgvsp: ENSP00000441723.1:p.Gln81Arg
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln253Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

8-29924380-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924380
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924380
    reference: chr 8
allele count: 2
allele frequency: 1.650382888830209e-5
allele num: 121184
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.449G>C
  hgvsp: ENSP00000428323.1:p.Gly150Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.239G>C
  hgvsp: ENSP00000441723.1:p.Gly80Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.754G>C
  hgvsp: ENSP00000429538.1:p.Gly252Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*628G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.190G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2778G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.755G>C
  hgvsp: ENSP00000256255.6:p.Gly252Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*462G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.363G>C
  hgvsp: ENSP00000427769.1:p.Gly122Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.239G>C
  hgvsp: ENSP00000441351.1:p.Gly80Ala
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly252Ala
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

8-29924380-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924380
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924380
    reference: chr 8
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.363G>A
  hgvsp: ENSP00000427769.1:p.Gly122Glu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.190G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.239G>A
  hgvsp: ENSP00000441723.1:p.Gly80Glu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*462G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.755G>A
  hgvsp: ENSP00000256255.6:p.Gly252Glu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.754G>A
  hgvsp: ENSP00000429538.1:p.Gly252Glu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*628G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.239G>A
  hgvsp: ENSP00000441351.1:p.Gly80Glu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.449G>A
  hgvsp: ENSP00000428323.1:p.Gly150Glu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2778G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly252Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

8-29924382-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924382
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924382
    reference: chr 8
allele count: 1
allele frequency: 8.252323028932645e-6
allele num: 121178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.188A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.237A>G
  hgvsp: ENST00000545648.1:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.753A>G
  hgvsp: ENST00000256255.6:c.753A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*460A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.447A>G
  hgvsp: ENST00000523127.1:c.447A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.361A>G
  hgvsp: ENST00000518296.1:c.361A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2776A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.237A>G
  hgvsp: ENST00000536273.1:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.752A>G
  hgvsp: ENST00000521265.1:c.752A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*626A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr251Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

8-29924383-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924383
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924383
    reference: chr 8
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.236C>G
  hgvsp: ENSP00000441723.1:p.Thr79Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.360C>G
  hgvsp: ENSP00000427769.1:p.Thr121Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.751C>G
  hgvsp: ENSP00000429538.1:p.Thr251Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.236C>G
  hgvsp: ENSP00000441351.1:p.Thr79Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2775C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*625C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.446C>G
  hgvsp: ENSP00000428323.1:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.752C>G
  hgvsp: ENSP00000256255.6:p.Thr251Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*459C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.187C>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr251Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ

8-29924425-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924425
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924425
    reference: chr 8
allele count: 4
allele frequency: 3.30310987795009e-5
allele num: 121098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.194A>T
  hgvsp: ENSP00000441351.1:p.Asn65Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.194A>T
  hgvsp: ENSP00000441723.1:p.Asn65Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.709A>T
  hgvsp: ENSP00000429538.1:p.Asn237Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.145A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.710A>T
  hgvsp: ENSP00000256255.6:p.Asn237Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.602A>T
  hgvsp: ENSP00000429630.1:p.Asn201Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2733A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.404A>T
  hgvsp: ENSP00000428323.1:p.Asn135Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*417A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*583A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.318A>T
  hgvsp: ENSP00000427769.1:p.Asn107Ile
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn237Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

8-29924434-C-CCTGTGAACTCAGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924434
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924447
    reference: chr 8
allele count: 22
allele frequency: 1.817761179231252e-4
allele num: 121028
alternate allele: CCTGTGAACTCAGA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsp: ENSP00000256255.6:p.Gly234ValfsTer2
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsp: ENSP00000441723.1:p.Gly62ValfsTer2
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsp: ENSP00000428323.1:p.Gly132ValfsTer2
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsp: ENSP00000427769.1:p.Gly104ValfsTer2
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsp: ENSP00000441351.1:p.Gly62ValfsTer2
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsp: ENSP00000429538.1:p.Gly234ValfsTer2
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsp: ENSP00000429630.1:p.Gly198ValfsTer2
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly234ValfsTer2
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

8-29924435-C-CTGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924435
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924478
    reference: chr 8
allele count: 79
allele frequency: 6.528817705492471e-4
allele num: 121002
alternate allele: CTGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAG
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice acceptor
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8807
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

8-29924435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924435
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924435
    reference: chr 8
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2723G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.135G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice acceptor
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3279
  bin: 7.75e1
  variant carriers: 0
hgvs: c.701-1G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

8-29924436-T-TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924436
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924468
    reference: chr 8
allele count: 33
allele frequency: 2.73224043715847e-4
allele num: 120780
alternate allele: TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

8-29924436-T-TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924436
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924474
    reference: chr 8
allele count: 81
allele frequency: 6.706408345752608e-4
allele num: 120780
alternate allele: TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 9.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

8-29924436-T-TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924436
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924478
    reference: chr 8
allele count: 59
allele frequency: 4.884914720980295e-4
allele num: 120780
alternate allele: TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAG
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 9.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

8-29924436-T-TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAGTTGGTGAATC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924436
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924488
    reference: chr 8
allele count: 27
allele frequency: 2.235469448584203e-4
allele num: 120780
alternate allele: TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAGTTGGTGAATC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

8-29924436-T-TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924436
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924471
    reference: chr 8
allele count: 82
allele frequency: 6.789203510514986e-4
allele num: 120780
alternate allele: TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 9.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

8-29924436-T-TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAGTTGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924436
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924482
    reference: chr 8
allele count: 82
allele frequency: 6.789203510514986e-4
allele num: 120780
alternate allele: TGTGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAGTTGG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 9.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8802
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

8-29924437-T-TGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAGTTGGTGAATCTCTGGTAACGGTGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924437
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924502
    reference: chr 8
allele count: 2
allele frequency: 1.717209877391215e-5
allele num: 116468
alternate allele: TGAACTCAGACTTAAAGCCTGGGGGAGGAGGTCCTGCTGAGTTGGTGAATCTCTGGTAACGGTGGG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

8-29924438-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924438
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924438
    reference: chr 8
allele count: 11
allele frequency: 9.432506131128986e-5
allele num: 116618
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-4T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-4T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-4T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-4T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2720T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-4T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-4T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-4T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.132T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-4T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-4T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6619
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.701-4T>C
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/8-29924441-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924441
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924441
    reference: chr 8
allele count: 10
allele frequency: 8.265009256810367e-5
allele num: 120992
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2717T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-7T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-7T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-7T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-7T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-7T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.129T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-7T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-7T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-7T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-7T>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6973
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.701-7T>G
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/8-29924443-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924443
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924443
    reference: chr 8
allele count: 6
allele frequency: 5.119366563710517e-5
allele num: 117202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-9T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-9T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-9T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-9T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.127T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-9T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2715T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-9T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-9T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-9T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-9T>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6650
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

8-29924445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924445
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924445
    reference: chr 8
allele count: 4
allele frequency: 3.306659612459494e-5
allele num: 120968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-11T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-11T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-11T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-11T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2713T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-11T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.125T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-11T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-11T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-11T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-11T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5555
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

8-29924453-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924453
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924453
    reference: chr 8
allele count: 1
allele frequency: 8.494156020657787e-6
allele num: 117728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-19A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-19A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2705A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-19A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-19A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-19A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-19A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-19A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.117A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-19A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-19A>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD

8-29924461-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924461
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924461
    reference: chr 8
allele count: 14
allele frequency: 1.184854178303627e-4
allele num: 118158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-27T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.109T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-27T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2697T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-27T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-27T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-27T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-27T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-27T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-27T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-27T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4424
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

8-29924465-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924465
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924465
    reference: chr 8
allele count: 1
allele frequency: 8.444947387977773e-6
allele num: 118414
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2693A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-31A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-31A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-31A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-31A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.105A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-31A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-31A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-31A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-31A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-31A>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/8-29924468-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924468
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924468
    reference: chr 8
allele count: 1
allele frequency: 8.420627168311495e-6
allele num: 118756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.102G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-34G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-34G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-34G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-34G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-34G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-34G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2690G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-34G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-34G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-34G>T
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

8-29924474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924474
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924474
    reference: chr 8
allele count: 2
allele frequency: 1.656287266463495e-5
allele num: 120752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2684G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-40G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-40G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-40G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-40G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-40G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.96G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-40G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-40G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-40G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-40G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6843
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3287
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

8-29924476-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924476
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924476
    reference: chr 8
allele count: 7
allele frequency: 5.854017528601057e-5
allele num: 119576
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-42A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-42A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-42A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-42A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-42A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2682A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-42A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-42A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.94A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-42A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-42A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6847
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

8-29924477-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924477
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924477
    reference: chr 8
allele count: 1
allele frequency: 8.35812911637859e-6
allele num: 119644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-43C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-43C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2681C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-43C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-43C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-43C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-43C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-43C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.93C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-43C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-43C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/8-29924479-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924479
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924478
    reference: chr 8
allele count: 1
allele frequency: 8.34278849362611e-6
allele num: 119864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2678delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-46delT
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.90delT
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: CA
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/8-29924480-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924480
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924480
    reference: chr 8
allele count: 1
allele frequency: 8.33694600993764e-6
allele num: 119948
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-46T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-46T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-46T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-46T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2678T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-46T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-46T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-46T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-46T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.90T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-46T>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

8-29924481-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29924481
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29924481
    reference: chr 8
allele count: 5
allele frequency: 4.146418323851856e-5
allele num: 120586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+2677C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.185-47C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*408-47C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.185-47C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.701-47C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.89C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.309-47C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*574-47C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.700-47C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429630
  ensembl transcript: ENST00000522794
  gene symbol: TMEM66
  hgvsc: ENST00000522794.1:c.593-47C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.395-47C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3289
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

8-29927107-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29927107
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29927107
    reference: chr 8
allele count: 1
allele frequency: 8.718243796969539e-6
allele num: 114702
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.700+51A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*573+51A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*407+51A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.184+51A>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.308+51A>C
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 685
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4999
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 5579
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43671
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.240368306275745e-4
allele num: 16508
num of homozygotes: 1

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499775011249437e-5
allele num: 66670
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.32e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

FS
type: SiteQuality
SIO_000300: 6.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.915e0

QD
type: SiteQuality
SIO_000300: 1.341e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.75e-2

DP
type: SiteQuality
SIO_000300: 1.682108e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 43581
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 4804
bin: 9.75e1
variant carriers: 142

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 8

GenotypeQuality
all individuals: 5575
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 193
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1988
bin: 7.75e1
variant carriers: 12

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1281
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 5

Other
type: Population
allele count: 5
allele frequency: 5.543237250554324e-3
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.861003861003861e-4
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 27
allele frequency: 1.637157409653165e-3
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.326756663205261e-4
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 54
allele frequency: 8.246792913866829e-3
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 133
allele frequency: 1.998257159169446e-3
allele num: 66558
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.086e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.684237e6

MQ
type: SiteQuality
SIO_000300: 5.725e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.142e0

QD
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5575
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43581
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4804
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.581551618814905e-4
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.502448991856727e-4
allele num: 66558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

MQRankSum
type: SiteQuality
SIO_000300: -4.142e0

DP
type: SiteQuality
SIO_000300: 1.684237e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.725e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.086e0

VQSLOD
type: SiteQuality
SIO_000300: -9.5e-1

QD
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 193
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 43581
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5575
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4804
bin: 9.75e1
variant carriers: 27

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.374465485644472e-3
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.906367378827489e-4
allele num: 66558
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.031772980839195e-4
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.791505791505791e-4
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.086e0

DP
type: SiteQuality
SIO_000300: 1.684237e6

MQRankSum
type: SiteQuality
SIO_000300: -4.142e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

VQSLOD
type: SiteQuality
SIO_000300: -9.5e-1

MQ
type: SiteQuality
SIO_000300: 5.725e1

QD
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 4804
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43581
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 193
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.455632681270471e-4
allele num: 66558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.069028711056811e-3
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.882609750181907e-4
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.684237e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.142e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.086e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

VQSLOD
type: SiteQuality
SIO_000300: -9.5e-1

MQ
type: SiteQuality
SIO_000300: 5.725e1

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 193
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 43581
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.93050193050193e-4
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.527183872938302e-3
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.425418384671356e-4
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.906367378827489e-4
allele num: 66558
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.086e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 1.684237e6

MQ
type: SiteQuality
SIO_000300: 5.725e1

MQRankSum
type: SiteQuality
SIO_000300: -4.142e0

GenotypeQuality
all individuals: 193
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4804
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43581
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819063788503517e-4
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.802938790228072e-4
allele num: 66558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.054367745876604e-4
allele num: 6548
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.5e-1

MQ
type: SiteQuality
SIO_000300: 5.725e1

DP
type: SiteQuality
SIO_000300: 1.684237e6

MQRankSum
type: SiteQuality
SIO_000300: -4.142e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.086e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1929
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3297
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43457
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5494
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 623
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1741
bin: 7.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.93721817551162e-4
allele num: 5766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.176470588235294e-3
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.088206945869477e-4
allele num: 64326
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.105204322444417e-4
allele num: 16102
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.092e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

DP
type: SiteQuality
SIO_000300: 1.702647e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.517e0

VQSLOD
type: SiteQuality
SIO_000300: -1.657e0

QD
type: SiteQuality
SIO_000300: 1.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

MQ
type: SiteQuality
SIO_000300: 5.747e1

GenotypeQuality
all individuals: 5111
bin: 9.75e1
variant carriers: 25

GenotypeQuality
all individuals: 1963
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 668
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 233
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 481
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5536
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 43436
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 1

South Asian
type: Population
allele count: 3
allele frequency: 1.818402230573403e-4
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.212389380530973e-3
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 1.667677380230443e-3
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.659969088098918e-5
allele num: 10352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.603820049252207e-4
allele num: 66596
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.225e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

DP
type: SiteQuality
SIO_000300: 1.692783e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.739e1

VQSLOD
type: SiteQuality
SIO_000300: -6.173e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.023e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

QD
type: SiteQuality
SIO_000300: 1.7e-1

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5111
bin: 9.75e1
variant carriers: 40

GenotypeQuality
all individuals: 233
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43436
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 5536
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 668
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1963
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 481
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1277
bin: 8.25e1
variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 1.931993817619784e-4
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 5.555889242597153e-4
allele num: 66596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.849072614862408e-4
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 16
allele frequency: 2.425712553062462e-3
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

VQSLOD
type: SiteQuality
SIO_000300: -6.173e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

QD
type: SiteQuality
SIO_000300: 1.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.023e0

MQRankSum
type: SiteQuality
SIO_000300: -4.225e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.692783e6

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.096422073984233e-4
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.952069193344946e-4
allele num: 66596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.173e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.225e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.023e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

DP
type: SiteQuality
SIO_000300: 1.692783e6

QD
type: SiteQuality
SIO_000300: 1.7e-1

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5111
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1277
bin: 8.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.096422073984233e-4
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.201273349750736e-4
allele num: 66596
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212268153715602e-4
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.225e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.023e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.173e-1

DP
type: SiteQuality
SIO_000300: 1.692783e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.739e1

QD
type: SiteQuality
SIO_000300: 1.7e-1

GenotypeQuality
all individuals: 233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 24

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1277
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GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.702865036939156e-4
allele num: 66596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.096422073984233e-4
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.659969088098918e-5
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.023e0

VQSLOD
type: SiteQuality
SIO_000300: -6.173e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.692783e6

MQ
type: SiteQuality
SIO_000300: 5.739e1

QD
type: SiteQuality
SIO_000300: 1.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.225e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
all individuals: 1761
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8
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variant carriers: 1

GenotypeQuality
all individuals: 1963
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variant carriers: 2

GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 14
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
bin: 4.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 668
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GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.702865036939156e-4
allele num: 66596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.580351728320194e-4
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730103806228374e-4
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.030670384289005e-4
allele num: 16498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.692783e6

MQRankSum
type: SiteQuality
SIO_000300: -4.225e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.023e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.173e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

QD
type: SiteQuality
SIO_000300: 1.7e-1

MQ
type: SiteQuality
SIO_000300: 5.739e1

GenotypeQuality
all individuals: 629
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variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 66
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1937
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.241619071268935e-4
allele num: 16108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.162790697674419e-3
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.635577191404918e-4
allele num: 64502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 8.582217645039478e-4
allele num: 5826
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.138e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

FS
type: SiteQuality
SIO_000300: 3.727e0

BaseQRankSum
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SIO_000300: 2.52e0

MQ
type: SiteQuality
SIO_000300: 5.712e1

QD
type: SiteQuality
SIO_000300: 1.9e-1

DP
type: SiteQuality
SIO_000300: 1.681369e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.612262468482873e-5
allele num: 65044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.653439153439153e-4
allele num: 6048
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.181998021760633e-5
allele num: 16176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.669081e6

ReadPosRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.805e1

FS
type: SiteQuality
SIO_000300: 1.535e0

MQRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502070952638214e-5
allele num: 66636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 1.2337e1

VQSLOD
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BaseQRankSum
type: SiteQuality
SIO_000300: 9.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.805e1

QD
type: SiteQuality
SIO_000300: 1.97e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 60
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 1.661129568106312e-4
allele num: 6020
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 6.187353050365054e-5
allele num: 16162
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 864
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.616094783812895e-5
allele num: 64990
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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SIO_000300: -5.2e-3

QD
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.658624e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.895e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5996
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.540215014015957e-5
allele num: 64926
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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DP
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SIO_000300: 1.65731e6

VQSLOD
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SIO_000300: 8.47e-1

MQ
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SIO_000300: 5.965e1

MQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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SIO_000300: 6.850000000000001e-1

QD
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BaseQRankSum
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SIO_000300: 4.01e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6082
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.534636751480924e-5
allele num: 65162
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.99e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
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FS
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QD
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MQRankSum
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BaseQRankSum
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DP
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MQ
type: SiteQuality
SIO_000300: 5.919e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.043676761527926e-5
allele num: 65710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

MQRankSum
type: SiteQuality
SIO_000300: -3.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

DP
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ClippingRankSum
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SIO_000300: -2.393e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0793e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
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VQSLOD
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SIO_000300: -1.65e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52587890625e-5
allele num: 65536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.58e0

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.52831e6

ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.447e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65588
num of homozygotes: 0

Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.854828737479906e-4
allele num: 16174
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
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ReadPosRankSum
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FS
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
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allele frequency: 3.049524274213223e-4
allele num: 16396
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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East Asian
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Other
type: Population
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DP
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ClippingRankSum
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MQ
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VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Other
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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DP
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FS
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MQRankSum
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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SIO_000300: 2.944203e6

BaseQRankSum
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SIO_000300: 6.68e-1

FS
type: SiteQuality
SIO_000300: 1.949e0

InbreedingCoeff
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SIO_000300: 1.8e-3

ClippingRankSum
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SIO_000300: 7.28e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
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SIO_000300: 1.033e1

VQSLOD
type: SiteQuality
SIO_000300: 9.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16500
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.949e0

BaseQRankSum
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MQ
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VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: 1.8e-3

QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele num: 16222
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Latino
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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FS
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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SIO_000300: -2.6e-3

VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele num: 16502
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VQSLOD
type: SiteQuality
SIO_000300: 4.33e-1

ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

FS
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BaseQRankSum
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MQRankSum
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DP
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SIO_000300: 2.976694e6

ClippingRankSum
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SIO_000300: 7.07e-1

QD
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SIO_000300: 1.13e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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FS
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DP
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

FS
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MQ
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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FS
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MQ
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VQSLOD
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MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.500240038406145e-5
allele num: 66656
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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FS
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MQ
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.083e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.819063788503517e-4
allele num: 16492
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
type: SiteQuality
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QD
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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Latino
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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FS
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VQSLOD
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QD
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MQRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66636
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

East Asian
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African
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South Asian
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Other
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East Asian
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Latino
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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MQ
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VQSLOD
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

QD
type: SiteQuality
SIO_000300: 1.38e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.144e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

VQSLOD
type: SiteQuality
SIO_000300: 2.07e0

DP
type: SiteQuality
SIO_000300: 3.016731e6

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8953
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33756
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

QD
type: SiteQuality
SIO_000300: 1.313e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 9.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.074e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.627e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 6.4e0

DP
type: SiteQuality
SIO_000300: 3.016482e6

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.46e0

QD
type: SiteQuality
SIO_000300: 1.327e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.842e0

DP
type: SiteQuality
SIO_000300: 3.016496e6

FS
type: SiteQuality
SIO_000300: 1.2677e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeDepth
all individuals: 895
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4011
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1818
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1952
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 253
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8913
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3170
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3287
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33755
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.007810153199159e-5
allele num: 66580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.205e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 9.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.015449e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

GenotypeDepth
all individuals: 3861
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 2036
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33744
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3990
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1818
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1950
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 296
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8794
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.803155522163787e-4
allele num: 66550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.854368932038835e-4
allele num: 16480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.196e0

FS
type: SiteQuality
SIO_000300: 7.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.004e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.51e0

DP
type: SiteQuality
SIO_000300: 3.013352e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

MQ
type: SiteQuality
SIO_000300: 5.763e1

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 303
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 1

GenotypeQuality
all individuals: 14
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variant carriers: 3

GenotypeQuality
all individuals: 32
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variant carriers: 1

GenotypeQuality
all individuals: 11
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variant carriers: 3

GenotypeQuality
all individuals: 1817
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variant carriers: 0

GenotypeQuality
all individuals: 33728
bin: 9.75e1
variant carriers: 65

GenotypeQuality
all individuals: 7
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variant carriers: 1

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 80
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GenotypeQuality
all individuals: 3233
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variant carriers: 0

GenotypeQuality
all individuals: 1951
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variant carriers: 1

GenotypeQuality
all individuals: 3170
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3988
bin: 6.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 20
allele frequency: 3.027550711474417e-3
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 45
allele frequency: 6.763255981724179e-4
allele num: 66536
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.248088360237893e-4
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.716284492809949e-5
allele num: 10292
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.434589800443459e-3
allele num: 902
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.465e-1

FS
type: SiteQuality
SIO_000300: 9.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 5.714e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 3.01395e6

MQRankSum
type: SiteQuality
SIO_000300: -5.544e0

QD
type: SiteQuality
SIO_000300: 1.1e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 104
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 1951
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variant carriers: 0

GenotypeQuality
all individuals: 32
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 3233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502945773716484e-5
allele num: 66536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.1e-1

FS
type: SiteQuality
SIO_000300: 9.45e-1

MQ
type: SiteQuality
SIO_000300: 5.714e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

VQSLOD
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SIO_000300: -6.465e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.544e0

DP
type: SiteQuality
SIO_000300: 3.01395e6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 109
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GenotypeQuality
all individuals: 3235
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variant carriers: 2

GenotypeQuality
all individuals: 1941
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1821
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733102253032929e-4
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.464585906667069e-4
allele num: 66386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.090133982947625e-4
allele num: 6568
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.430133657351154e-4
allele num: 16460
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.537e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.163e0

MQ
type: SiteQuality
SIO_000300: 5.721e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

DP
type: SiteQuality
SIO_000300: 3.017875e6

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 33535
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variant carriers: 66

GenotypeQuality
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GenotypeQuality
all individuals: 323
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 1

Latino
type: Population
allele count: 2
allele frequency: 1.733102253032929e-4
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.290400972053463e-4
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 54
allele frequency: 8.134245172174856e-4
allele num: 66386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 13
allele frequency: 1.979293544457978e-3
allele num: 6568
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.163e0

MQ
type: SiteQuality
SIO_000300: 5.721e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

QD
type: SiteQuality
SIO_000300: 1.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.537e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.017875e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1821
bin: 8.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 1941
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 46

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 3976
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 16
allele frequency: 2.43605359317905e-3
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733102253032929e-4
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.037667071688943e-4
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 5.422830114783238e-4
allele num: 66386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQ
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SIO_000300: 5.721e1

QD
type: SiteQuality
SIO_000300: 1.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.163e0

DP
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SIO_000300: 3.017875e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: -4.537e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.218026796589525e-3
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.410146717681439e-4
allele num: 66386
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.822600243013366e-4
allele num: 16460
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.537e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

MQ
type: SiteQuality
SIO_000300: 5.721e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.163e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.1e-1

DP
type: SiteQuality
SIO_000300: 3.017875e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

GenotypeQuality
all individuals: 323
bin: 2.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 8802
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 120
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variant carriers: 2

GenotypeQuality
all individuals: 34
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variant carriers: 1

GenotypeQuality
all individuals: 22
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variant carriers: 3

GenotypeQuality
all individuals: 1941
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GenotypeQuality
all individuals: 70
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 33535
bin: 9.75e1
variant carriers: 61

GenotypeQuality
all individuals: 3976
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1821
bin: 8.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 45
allele frequency: 6.778537643479047e-4
allele num: 66386
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.944012441679627e-4
allele num: 10288
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.332755632582322e-4
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 20
allele frequency: 3.045066991473812e-3
allele num: 6568
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.467800729040097e-4
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.163e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: -4.537e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.017875e6

MQ
type: SiteQuality
SIO_000300: 5.721e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

QD
type: SiteQuality
SIO_000300: 1.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

GenotypeQuality
all individuals: 120
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 33535
bin: 9.75e1
variant carriers: 63

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 1

GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 109
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GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 2

GenotypeQuality
all individuals: 34
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variant carriers: 1

GenotypeQuality
all individuals: 1941
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GenotypeQuality
all individuals: 3286
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 323
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1821
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3976
bin: 6.75e1
variant carriers: 2

Other
type: Population
allele count: 2
allele frequency: 2.232142857142857e-3
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.860267314702309e-4
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 5.573464284638328e-4
allele num: 66386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 35
allele frequency: 5.328867235079172e-3
allele num: 6568
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.163e0

MQ
type: SiteQuality
SIO_000300: 5.721e1

VQSLOD
type: SiteQuality
SIO_000300: -4.537e-1

DP
type: SiteQuality
SIO_000300: 3.017875e6

BaseQRankSum
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SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

QD
type: SiteQuality
SIO_000300: 1.1e-1

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.136566087447463e-5
allele num: 63764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.59e-1

VQSLOD
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SIO_000300: -1.045e0

BaseQRankSum
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SIO_000300: 4.68e0

MQRankSum
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SIO_000300: -7.841e0

InbreedingCoeff
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SIO_000300: -8.800000000000001e-3

MQ
type: SiteQuality
SIO_000300: 5.714e1

DP
type: SiteQuality
SIO_000300: 3.02509e6

QD
type: SiteQuality
SIO_000300: 7.000000000000001e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 31763
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.409465342813293e-4
allele num: 63854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.776198934280639e-4
allele num: 5630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2375249500998e-5
allele num: 16032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.793e1

DP
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SIO_000300: 3.022113e6

QD
type: SiteQuality
SIO_000300: 8.2e-1

InbreedingCoeff
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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SIO_000300: -2.462e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 39
bin: 4.25e1
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GenotypeQuality
all individuals: 3164
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3208
bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

European (Finnish)
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allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.20242890639091e-4
allele num: 66532
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
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Latino
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -7.199999999999999e-2

MQ
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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DP
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.36e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8636
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South Asian
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allele count: 1
allele frequency: 6.221226825930074e-5
allele num: 16074
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European (Finnish)
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allele count: 1
allele frequency: 1.730103806228374e-4
allele num: 5780
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European (Non-Finnish)
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allele frequency: 6.22975330176925e-5
allele num: 64208
num of homozygotes: 0

DP
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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QD
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SIO_000300: 1.22e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.509379509379509e-5
allele num: 66528
num of homozygotes: 0

South Asian
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allele count: 1
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allele num: 16470
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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QD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: 7.9e-2

InbreedingCoeff
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SIO_000300: -2.0e-4

FS
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ClippingRankSum
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VQSLOD
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DP
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MQ
type: SiteQuality
SIO_000300: 5.909e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64536
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.208866261020738e-5
allele num: 16106
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
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Latino
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allele count: 0
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MQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

BaseQRankSum
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SIO_000300: 3.81e0

DP
type: SiteQuality
SIO_000300: 2.935782e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
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SIO_000300: -6.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

FS
type: SiteQuality
SIO_000300: 2.583e0

QD
type: SiteQuality
SIO_000300: 1.421e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
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allele count: 14
allele frequency: 1.372010976087809e-3
allele num: 10204
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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ClippingRankSum
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SIO_000300: -5.9e-2

ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16154
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 866
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10210
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European (Finnish)
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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MQ
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MQRankSum
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FS
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 65228
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African
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Latino
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East Asian
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European (Finnish)
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Other
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South Asian
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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Other
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European (Non-Finnish)
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allele num: 66450
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African
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European (Finnish)
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South Asian
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InbreedingCoeff
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QD
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MQ
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521005080156968e-5
allele num: 65746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.154603643525357e-5
allele num: 16248
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.827044025157233e-5
allele num: 10176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.240249609984399e-4
allele num: 6410
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.241e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.206e0

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

DP
type: SiteQuality
SIO_000300: 2.847079e6

QD
type: SiteQuality
SIO_000300: 1.31e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.35e-1

GenotypeQuality
all individuals: 717
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.316e1

DP
type: SiteQuality
SIO_000300: 2.844174e6

MQRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -8.118e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 2.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.143e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.165e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3273
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65914
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.86e-1

BaseQRankSum
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SIO_000300: -5.657e0

ReadPosRankSum
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SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.59e-1

QD
type: SiteQuality
SIO_000300: 2.061e1

MQ
type: SiteQuality
SIO_000300: 6.023e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

DP
type: SiteQuality
SIO_000300: 2.839296e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.934e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65996
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

FS
type: SiteQuality
SIO_000300: 3.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

DP
type: SiteQuality
SIO_000300: 2.834227e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.253e0

QD
type: SiteQuality
SIO_000300: 1.218e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1874
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variant carriers: 0

GenotypeQuality
all individuals: 791
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variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66398
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.801810164771409e-4
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.194e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 2.832628e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
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SIO_000300: 4.51e-1

FS
type: SiteQuality
SIO_000300: 2.343e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

BaseQRankSum
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SIO_000300: -3.879e0