8-29921346-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921346
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921346
    reference: chr 8
allele count: 2
allele frequency: 1.690531333998276e-5
allele num: 118306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*785T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*58T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.1037T>C
  hgvsp: ENST00000521265.1:c.1037T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*951T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*58T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*58T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*58T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5036
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39432
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser346Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

8-29921353-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921353
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921353
    reference: chr 8
allele count: 1
allele frequency: 8.357430591538938e-6
allele num: 119654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*51C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*51C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.1030C>T
  hgvsp: ENSP00000429538.1:p.Ser344Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*51C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*51C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*778C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*944C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6235
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5039
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser344Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

8-29921355-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921355
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921355
    reference: chr 8
allele count: 1
allele frequency: 8.337641114575865e-6
allele num: 119938
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*49A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*49A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*776A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*49A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*49A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.1028A>G
  hgvsp: ENST00000521265.1:c.1028A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*942A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5048
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40541
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 79
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser343Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

8-29921357-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921357
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921357
    reference: chr 8
allele count: 1
allele frequency: 8.32126749546491e-6
allele num: 120174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*940T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*47T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*47T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*47T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*774T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.1026T>A
  hgvsp: ENSP00000429538.1:p.Ser343Thr
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*47T>A
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5048
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser343Thr
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

8-29921374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921374
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921374
    reference: chr 8
allele count: 1
allele frequency: 8.268289456277286e-6
allele num: 120944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.1009C>T
  hgvsp: ENSP00000429538.1:p.Ala337Val
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*757C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*30C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*447C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*923C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41308
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala337Val
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

8-29921381-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921381
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921381
    reference: chr 8
allele count: 3
allele frequency: 2.47827379968939e-5
allele num: 121052
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*23C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.1002C>G
  hgvsp: ENSP00000429538.1:p.Leu335Val
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*23C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*23C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*750C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*916C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*440C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*23C>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10361
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41387
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6426
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu335Val
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

8-29921383-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921383
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921383
    reference: chr 8
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*21C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*748C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*21C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*21C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*438C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.1000C>A
  hgvsp: ENSP00000429538.1:p.Thr334Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*21C>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*914C>A
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41399
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr334Lys
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

8-29921385-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921385
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921385
    reference: chr 8
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*746A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*436A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.998A>G
  hgvsp: ENST00000521265.1:c.998A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*19A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*912A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*19A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*19A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*19A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln333Gln
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

8-29921391-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921391
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921391
    reference: chr 8
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*430G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*13G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*906G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.992G>C
  hgvsp: ENSP00000429538.1:p.Trp331Cys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*13G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*740G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*13G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*13G>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10394
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Trp331Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

8-29921402-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921402
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921402
    reference: chr 8
allele count: 1
allele frequency: 8.259138737012504e-6
allele num: 121078
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.*2G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.*2G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.981G>C
  hgvsp: ENSP00000429538.1:p.Val328Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*895G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.*2G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.*2G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*729G>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*419G>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41360
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val328Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/8-29921408-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921408
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921408
    reference: chr 8
allele count: 2
allele frequency: 1.651773178507128e-5
allele num: 121082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*889G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.500G>T
  hgvsp: ENSP00000441723.1:p.Arg167Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.1016G>T
  hgvsp: ENSP00000256255.6:p.Arg339Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.975G>T
  hgvsp: ENSP00000429538.1:p.Asp326Tyr
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.500G>T
  hgvsp: ENSP00000441351.1:p.Arg167Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.638G>T
  hgvsp: ENSP00000428323.1:p.Arg213Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*413G>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*723G>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg339Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

5-77771499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77771499
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 77771499
    reference: chr 5
allele count: 116
allele frequency: 4.126058191648289e-3
allele num: 28114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000320280
  gene symbol: SCAMP1
  hgvsc: ENST00000320280.7:n.627C>T
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000085365
  ensembl protein: ENSP00000475496
  ensembl transcript: ENST00000538629
  gene symbol: SCAMP1
  hgvsc: ENST00000538629.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000509998
  gene symbol: SCAMP1
  hgvsc: ENST00000509998.1:n.925C>T
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000508822
  gene symbol: SCAMP1
  hgvsc: ENST00000508822.1:n.1007C>T
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000339292
  gene symbol: SCAMP1
  hgvsc: ENST00000339292.4:n.1113C>T
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000506858
  gene symbol: SCAMP1
  hgvsc: ENST00000506858.1:n.450C>T
  variant of: http://identifiers.org/hgnc/10563
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22106
  bin: 7.5e0
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 22247
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8973
  bin: 1.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 22615
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 23846
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 9.75e1
  variant carriers: 135
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 6.75e1
  variant carriers: 15
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

8-29921409-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921409
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921409
    reference: chr 8
allele count: 3
allele frequency: 2.477700693756194e-5
allele num: 121080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.499C>T
  hgvsp: ENSP00000441723.1:p.Arg167Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*722C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*888C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.974C>T
  hgvsp: ENST00000521265.1:c.974C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*412C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.499C>T
  hgvsp: ENSP00000441351.1:p.Arg167Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.1015C>T
  hgvsp: ENSP00000256255.6:p.Arg339Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.637C>T
  hgvsp: ENSP00000428323.1:p.Arg213Ter
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41337
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1585
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg339Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD

8-29921413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921413
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921413
    reference: chr 8
allele count: 3
allele frequency: 2.477864411259416e-5
allele num: 121072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.495G>A
  hgvsp: ENST00000545648.1:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*718G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.1011G>A
  hgvsp: ENST00000256255.6:c.1011G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.970G>A
  hgvsp: ENSP00000429538.1:p.Gly324Glu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.633G>A
  hgvsp: ENST00000523127.1:c.633G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.495G>A
  hgvsp: ENST00000536273.1:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*884G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly324Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

8-29921417-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921417
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921417
    reference: chr 8
allele count: 1
allele frequency: 8.260366760284156e-6
allele num: 121060
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-4C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.1007C>G
  hgvsp: ENSP00000256255.6:p.Thr336Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*880C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.966C>G
  hgvsp: ENSP00000429538.1:p.Pro323Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.491C>G
  hgvsp: ENSP00000441723.1:p.Thr164Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.629C>G
  hgvsp: ENSP00000428323.1:p.Thr210Ser
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*714C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.491C>G
  hgvsp: ENSP00000441351.1:p.Thr164Ser
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5052
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41300
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr336Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

8-29921423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921423
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921423
    reference: chr 8
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.960G>A
  hgvsp: ENSP00000429538.1:p.Val321Met
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*874G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.623G>A
  hgvsp: ENSP00000428323.1:p.Gly208Asp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*708G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.485G>A
  hgvsp: ENSP00000441351.1:p.Gly162Asp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.485G>A
  hgvsp: ENSP00000441723.1:p.Gly162Asp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.1001G>A
  hgvsp: ENSP00000256255.6:p.Gly334Asp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-10G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5053
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly334Asp
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

8-29921425-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921425
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921425
    reference: chr 8
allele count: 279
allele frequency: 2.306051939893872e-3
allele num: 120986
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.958T>C
  hgvsp: ENSP00000429538.1:p.Met320Thr
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.483T>C
  hgvsp: ENST00000545648.1:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*706T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.999T>C
  hgvsp: ENST00000256255.6:c.999T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*872T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.483T>C
  hgvsp: ENST00000536273.1:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.621T>C
  hgvsp: ENST00000523127.1:c.621T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-12T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 39941
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 9.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5284
  bin: 9.75e1
  variant carriers: 276
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met320Thr
num of homozygotes: 2
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-29921430-C-CTGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921430
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921466
    reference: chr 8
allele count: 20
allele frequency: 1.65404082172748e-4
allele num: 120916
alternate allele: CTGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACA
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 41011
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

8-29921430-C-CTGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCGAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921430
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921473
    reference: chr 8
allele count: 22
allele frequency: 1.819444903900228e-4
allele num: 120916
alternate allele: CTGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCGAA
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39851
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6397
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 8.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

8-29921431-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921431
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921432
    reference: chr 8
allele count: 46
allele frequency: 3.806056594406751e-4
allele num: 120860
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-3_954-2insC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-3_*868-2insC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-3_479-2insC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-3_479-2insC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-3_995-2insC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-3_*702-2insC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-3_617-2insC
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-19_*408-18insC
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 39772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6380
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40939
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 7.75e1
  variant carriers: 1
hgvs: c.995-3_995-2insC
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP

8-29921431-T-TGATGCAGTTCTGGTTTTCGTGTCTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921431
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921456
    reference: chr 8
allele count: 39
allele frequency: 3.226874069170941e-4
allele num: 120860
alternate allele: TGATGCAGTTCTGGTTTTCGTGTCTG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39772
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40939
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

8-29921431-T-TGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921431
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921465
    reference: chr 8
allele count: 5
allele frequency: 4.137018037398643e-5
allele num: 120860
alternate allele: TGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAAC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6380
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

8-29921431-T-TGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921431
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921471
    reference: chr 8
allele count: 8
allele frequency: 6.619228859837829e-5
allele num: 120860
alternate allele: TGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

8-29921431-T-TGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCGAATAGCTGCCCGAGCCTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921431
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921490
    reference: chr 8
allele count: 1
allele frequency: 8.274036074797286e-6
allele num: 120860
alternate allele: TGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCGAATAGCTGCCCGAGCCTCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5203
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

8-29921431-T-TGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCGAATAGCTGCCCGAGCCTCCATGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921431
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921494
    reference: chr 8
allele count: 1
allele frequency: 8.274036074797286e-6
allele num: 120860
alternate allele: TGATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCGAATAGCTGCCCGAGCCTCCATGA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40939
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

8-29921432-A-ATGCAGTTCTGGTTTTCGTGTCTGAGTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921432
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921460
    reference: chr 8
allele count: 6
allele frequency: 5.09683995922528e-5
allele num: 117720
alternate allele: ATGCAGTTCTGGTTTTCGTGTCTGAGTTT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4803
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40095
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2360
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

8-29921432-A-ATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921432
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921469
    reference: chr 8
allele count: 39
allele frequency: 3.312945973496432e-4
allele num: 117720
alternate allele: ATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6183
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 40095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
reference allele: A
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

8-29921432-A-ATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCGAATAGCTGCCCGAGCCTCCAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921432
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921491
    reference: chr 8
allele count: 1
allele frequency: 8.494733265375467e-6
allele num: 117720
alternate allele: ATGCAGTTCTGGTTTTCGTGTCTGAGTTTGAACATACCGAATAGCTGCCCGAGCCTCCAT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

8-29921434-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921434
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921434
    reference: chr 8
allele count: 28
allele frequency: 2.36854571293226e-4
allele num: 118216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-5T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-5T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-5T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-5T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-21T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-5T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-5T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-5T>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38807
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6232
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
hgvs: c.995-5T>A
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

8-29921435-A-ACATACCGAATAGCTGCCCGAGCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921435
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921458
    reference: chr 8
allele count: 3
allele frequency: 2.540521314973833e-5
allele num: 118086
alternate allele: ACATACCGAATAGCTGCCCGAGCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6225
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
hgvs: c.995-7_995-6insGGCTCGGGCAGCTATTCGGTATG
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

8-29921435-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921435
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921435
    reference: chr 8
allele count: 28
allele frequency: 2.37115322730891e-4
allele num: 118086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-6T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-6T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-6T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-6T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-6T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-6T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-6T>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-22T>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 10066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 9.25e1
  variant carriers: 1
hgvs: c.995-6T>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

8-29921437-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921437
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921437
    reference: chr 8
allele count: 1
allele frequency: 8.448943037226043e-6
allele num: 118358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-8C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-8C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-8C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-8C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-8C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-8C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-8C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-24C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2386
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40026
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 7.25e1
  variant carriers: 0
hgvs: c.995-8C>T
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

8-29921443-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921443
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921443
    reference: chr 8
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-14C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-14C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-30C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-14C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-14C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-14C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-14C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-14C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/8-29921447-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921447
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921447
    reference: chr 8
allele count: 1
allele frequency: 8.430565859580495e-6
allele num: 118616
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-18T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-18T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-34T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-18T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-18T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-18T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-18T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-18T>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

8-29921455-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921455
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921455
    reference: chr 8
allele count: 1
allele frequency: 8.407317729351627e-6
allele num: 118944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-26T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-26T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-26T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-42T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-26T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-26T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-26T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-26T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6200
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

8-29921461-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921461
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921461
    reference: chr 8
allele count: 2
allele frequency: 1.659007581664648e-5
allele num: 120554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-32A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-32A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-32A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-48A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-32A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-32A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-32A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-32A>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6249
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5517
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

8-29921476-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921476
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921476
    reference: chr 8
allele count: 1
allele frequency: 8.379841453399702e-6
allele num: 119334
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-47T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-47T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-47T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-47T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-63T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-47T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-47T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-47T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-29921480-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29921480
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29921480
    reference: chr 8
allele count: 1
allele frequency: 8.368480953337351e-6
allele num: 119496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*702-51A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.479-51A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.954-51A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-67A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.617-51A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.995-51A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*868-51A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.479-51A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5698
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29847
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4872
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

8-29923411-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923411
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923411
    reference: chr 8
allele count: 2
allele frequency: 2.073054438409553e-5
allele num: 96476
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-1998T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.522T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*40T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+93T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+93T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+93T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+93T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+93T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+93T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+133T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18099
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9306
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9623
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7663
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

8-29923414-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923414
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923414
    reference: chr 8
allele count: 1
allele frequency: 1.0351752551707e-5
allele num: 96602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*37C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+90C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+90C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+90C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2001C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+90C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+90C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.519C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+130C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+90C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11541
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12637
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-29923415-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923415
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923415
    reference: chr 8
allele count: 1
allele frequency: 1.03297248161309e-5
allele num: 96808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+89A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+89A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+89A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+89A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*36A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.518A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2002A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+89A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+129A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+89A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17601
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10852
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13047
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

8-29923425-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923425
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923425
    reference: chr 8
allele count: 1
allele frequency: 1.012248203259439e-5
allele num: 98790
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+79C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+79C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2012C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+79C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+119C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+79C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+79C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+79C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*26C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.508C>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12438
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

8-29923426-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923426
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923426
    reference: chr 8
allele count: 1
allele frequency: 1.007211635308811e-5
allele num: 99284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.507T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2013T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+78T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+78T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*25T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+78T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+78T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+78T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+118T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+78T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11857
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

8-29923429-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923429
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923429
    reference: chr 8
allele count: 1
allele frequency: 9.964923469387754e-6
allele num: 100352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*22T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.504T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+75T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+75T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+75T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+75T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+115T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+75T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+75T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2016T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

8-29923434-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923434
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923434
    reference: chr 8
allele count: 4
allele frequency: 3.882515093277425e-5
allele num: 103026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*17G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+110G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2021G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+70G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.499G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+70G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+70G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+70G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+70G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+70G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

8-29923438-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923438
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923438
    reference: chr 8
allele count: 2
allele frequency: 1.889216353056752e-5
allele num: 105864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2025A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+66A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+66A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.495A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+66A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+66A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+66A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*13A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+106A>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+66A>T
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3090
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

8-29923439-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923439
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923439
    reference: chr 8
allele count: 1
allele frequency: 9.371719898035687e-6
allele num: 106704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2026T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.494T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+65T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*12T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+65T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+65T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+65T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+65T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+105T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+65T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5014
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32122
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

8-29923448-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923448
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923448
    reference: chr 8
allele count: 2
allele frequency: 1.748068384435199e-5
allele num: 114412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2035T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+56T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+96T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+56T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+56T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+56T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.485T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+56T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.*3T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+56T>C
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9469
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-29923454-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923454
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923454
    reference: chr 8
allele count: 4
allele frequency: 3.417868617130358e-5
allele num: 117032
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.479A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.652A>G
  hgvsp: ENST00000518296.1:c.652A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+90A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+50A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+50A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+50A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+50A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2041A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+50A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+50A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9976
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys218Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

8-29923460-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923460
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923460
    reference: chr 8
allele count: 1
allele frequency: 8.378998877214151e-6
allele num: 119346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+44A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+44A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+44A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.646A>G
  hgvsp: ENST00000518296.1:c.646A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2047A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+44A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+44A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+84A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.473A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+44A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val216Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

8-29923469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923469
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923469
    reference: chr 8
allele count: 1
allele frequency: 8.286926544683108e-6
allele num: 120672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.637G>A
  hgvsp: ENST00000518296.1:c.637G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+35G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+35G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+35G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.464G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+35G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2056G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+35G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+35G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+75G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg213Arg
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

8-29923471-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923471
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923471
    reference: chr 8
allele count: 1
allele frequency: 8.276364358664525e-6
allele num: 120826
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+73A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2058A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.462A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+33A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.635A>G
  hgvsp: ENSP00000427769.1:p.Arg213Gly
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+33A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg213Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

8-29923474-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923474
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923474
    reference: chr 8
allele count: 1
allele frequency: 8.391092016715055e-6
allele num: 119174
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+30C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.632C>G
  hgvsp: ENSP00000427769.1:p.Pro212Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+30C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2061C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+30C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+30C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+70C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+30C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.459C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+30C>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro212Ala
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

8-29923487-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923487
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923487
    reference: chr 8
allele count: 1
allele frequency: 8.429144610404936e-6
allele num: 118636
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.619C>T
  hgvsp: ENST00000518296.1:c.619C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+17C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+17C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+17C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+17C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+17C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+17C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2074C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.446C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+57C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5543
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr207Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

8-29923487-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923487
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923487
    reference: chr 8
allele count: 1
allele frequency: 8.429144610404936e-6
allele num: 118636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+17C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.619C>G
  hgvsp: ENSP00000427769.1:p.Tyr207Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2074C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+57C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.446C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+17C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+17C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+17C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+17C>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+17C>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr207Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

8-29923491-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923491
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923491
    reference: chr 8
allele count: 1
allele frequency: 8.437536914224e-6
allele num: 118518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+53A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.615A>G
  hgvsp: ENSP00000427769.1:p.Lys206Arg
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.478+13A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.994+13A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.478+13A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2078A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.616+13A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*701+13A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.442A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*867+13A>G
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys206Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

8-29923507-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923507
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923507
    reference: chr 8
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.475T>C
  hgvsp: ENSP00000441351.1:p.Ser159Pro
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.613T>C
  hgvsp: ENSP00000428323.1:p.Ser205Pro
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.426T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.991T>C
  hgvsp: ENSP00000256255.6:p.Ser331Pro
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+37T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*864T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2094T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.599T>C
  hgvsp: ENSP00000427769.1:p.Ser201Pro
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*698T>C
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.475T>C
  hgvsp: ENSP00000441723.1:p.Ser159Pro
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10670
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser331Pro
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

8-29923515-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923515
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923515
    reference: chr 8
allele count: 2
allele frequency: 1.647799363949445e-5
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.591G>A
  hgvsp: ENSP00000427769.1:p.Arg198Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*856G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+29G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.605G>A
  hgvsp: ENSP00000428323.1:p.Arg202Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.418G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.983G>A
  hgvsp: ENSP00000256255.6:p.Arg328Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.467G>A
  hgvsp: ENSP00000441351.1:p.Arg156Lys
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2102G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*690G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.467G>A
  hgvsp: ENSP00000441723.1:p.Arg156Lys
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg328Lys
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

8-29923519-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923519
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923519
    reference: chr 8
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+25A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.601A>G
  hgvsp: ENSP00000428323.1:p.Thr201Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*686A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.463A>G
  hgvsp: ENSP00000441351.1:p.Thr155Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.463A>G
  hgvsp: ENSP00000441723.1:p.Thr155Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.414A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*852A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.979A>G
  hgvsp: ENSP00000256255.6:p.Thr327Ala
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2106A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.587A>G
  hgvsp: ENSP00000427769.1:p.Thr197Ala
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4965
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr327Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD

8-29923523-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923523
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923523
    reference: chr 8
allele count: 3
allele frequency: 2.47161759132627e-5
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2110G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.597G>A
  hgvsp: ENST00000523127.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*682G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.583G>A
  hgvsp: ENST00000518296.1:c.583G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.975G>A
  hgvsp: ENST00000256255.6:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+21G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*848G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.459G>A
  hgvsp: ENST00000536273.1:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.459G>A
  hgvsp: ENST00000545648.1:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.410G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr325Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

8-29923524-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923524
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923524
    reference: chr 8
allele count: 4
allele frequency: 3.29549012176836e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*847C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.974C>T
  hgvsp: ENSP00000256255.6:p.Thr325Met
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2111C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.458C>T
  hgvsp: ENSP00000441351.1:p.Thr153Met
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*681C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.458C>T
  hgvsp: ENSP00000441723.1:p.Thr153Met
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.582C>T
  hgvsp: ENSP00000427769.1:p.Thr195Met
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+20C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.596C>T
  hgvsp: ENSP00000428323.1:p.Thr199Met
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.409C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr325Met
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ

5-77771500-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77771500
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 77771500
    reference: chr 5
allele count: 1
allele frequency: 3.543586109142452e-5
allele num: 28220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000506858
  gene symbol: SCAMP1
  hgvsc: ENST00000506858.1:n.451A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000509998
  gene symbol: SCAMP1
  hgvsc: ENST00000509998.1:n.926A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000085365
  ensembl protein: ENSP00000475496
  ensembl transcript: ENST00000538629
  gene symbol: SCAMP1
  hgvsc: ENST00000538629.1:c.*9A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000508822
  gene symbol: SCAMP1
  hgvsc: ENST00000508822.1:n.1008A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000320280
  gene symbol: SCAMP1
  hgvsc: ENST00000320280.7:n.628A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000339292
  gene symbol: SCAMP1
  hgvsc: ENST00000339292.4:n.1114A>G
  variant of: http://identifiers.org/hgnc/10563
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8836
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2628
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1885
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22898
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

5-77771509-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77771509
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 77771509
    reference: chr 5
allele count: 1
allele frequency: 4.294057025077293e-5
allele num: 23288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000509998
  gene symbol: SCAMP1
  hgvsc: ENST00000509998.1:n.935A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000508822
  gene symbol: SCAMP1
  hgvsc: ENST00000508822.1:n.1017A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000506858
  gene symbol: SCAMP1
  hgvsc: ENST00000506858.1:n.460A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000339292
  gene symbol: SCAMP1
  hgvsc: ENST00000339292.4:n.1123A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000320280
  gene symbol: SCAMP1
  hgvsc: ENST00000320280.7:n.637A>G
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000085365
  ensembl protein: ENSP00000475496
  ensembl transcript: ENST00000538629
  gene symbol: SCAMP1
  hgvsc: ENST00000538629.1:c.*18A>G
  variant of: http://identifiers.org/hgnc/10563
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19097
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18656
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

5-77771513-TTACCTTTTGACTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77771513
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 77771500
    reference: chr 5
allele count: 3
allele frequency: 1.459996106677049e-4
allele num: 20548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000508822
  gene symbol: SCAMP1
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000085365
  ensembl protein: ENSP00000475496
  ensembl transcript: ENST00000538629
  gene symbol: SCAMP1
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000506858
  gene symbol: SCAMP1
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000339292
  gene symbol: SCAMP1
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000509998
  gene symbol: SCAMP1
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000320280
  gene symbol: SCAMP1
  variant of: http://identifiers.org/hgnc/10563
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17888
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29073
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15549
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TTACCTTTTGACTG
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

5-77771517-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77771517
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 77771516
    reference: chr 5
allele count: 1
allele frequency: 5.349309939017867e-5
allele num: 18694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000320280
  gene symbol: SCAMP1
  hgvsc: ENST00000320280.7:n.649delT
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000085365
  ensembl protein: ENSP00000475496
  ensembl transcript: ENST00000538629
  gene symbol: SCAMP1
  hgvsc: ENST00000538629.1:c.*30delT
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000508822
  gene symbol: SCAMP1
  hgvsc: ENST00000508822.1:n.1029delT
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000339292
  gene symbol: SCAMP1
  hgvsc: ENST00000339292.4:n.1135delT
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000509998
  gene symbol: SCAMP1
  hgvsc: ENST00000509998.1:n.947delT
  variant of: http://identifiers.org/hgnc/10563
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000085365
  ensembl transcript: ENST00000506858
  gene symbol: SCAMP1
  hgvsc: ENST00000506858.1:n.472delT
  variant of: http://identifiers.org/hgnc/10563
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13510
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: CT
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

8-29923534-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923534
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923534
    reference: chr 8
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+10A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*671A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.572A>G
  hgvsp: ENSP00000427769.1:p.Asn192Asp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.964A>G
  hgvsp: ENSP00000256255.6:p.Asn322Asp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2121A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*837A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.586A>G
  hgvsp: ENSP00000428323.1:p.Asn196Asp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.448A>G
  hgvsp: ENSP00000441351.1:p.Asn150Asp
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.399A>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.448A>G
  hgvsp: ENSP00000441723.1:p.Asn150Asp
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn322Asp
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

8-29923543-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923543
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923543
    reference: chr 8
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.390G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.563G>A
  hgvsp: ENSP00000427769.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.439G>A
  hgvsp: ENSP00000441351.1:p.Val147Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*662G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2130G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.955G>A
  hgvsp: ENSP00000256255.6:p.Val319Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953+1G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*828G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.577G>A
  hgvsp: ENSP00000428323.1:p.Val193Ile
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.439G>A
  hgvsp: ENSP00000441723.1:p.Val147Ile
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5580
  bin: 6.75e1
  variant carriers: 0
hgvs: c.953+1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

8-29923544-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923544
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923544
    reference: chr 8
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.438G>A
  hgvsp: ENST00000536273.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.953G>A
  hgvsp: ENST00000521265.1:c.953G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*661G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.562G>A
  hgvsp: ENST00000518296.1:c.562G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.954G>A
  hgvsp: ENST00000256255.6:c.954G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.576G>A
  hgvsp: ENST00000523127.1:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.438G>A
  hgvsp: ENST00000545648.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.389G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2131G>A
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*827G>A
  variant of: http://identifiers.org/hgnc/28789
canonical: false
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: c.953G>A
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

8-29923545-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923545
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923545
    reference: chr 8
allele count: 3
allele frequency: 2.471576866040534e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.953C>T
  hgvsp: ENSP00000256255.6:p.Ser318Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.437C>T
  hgvsp: ENSP00000441723.1:p.Ser146Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2132C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.952C>T
  hgvsp: ENSP00000429538.1:p.Ser318Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.388C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.561C>T
  hgvsp: ENSP00000427769.1:p.Ser188Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.437C>T
  hgvsp: ENSP00000441351.1:p.Ser146Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*826C>T
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.575C>T
  hgvsp: ENSP00000428323.1:p.Ser192Leu
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*660C>T
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser318Leu
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/8-29923547-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29923547
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 29923547
    reference: chr 8
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000429538
  ensembl transcript: ENST00000521265
  gene symbol: TMEM66
  hgvsc: ENST00000521265.1:c.950T>G
  hgvsp: ENSP00000429538.1:p.Tyr317Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000431005
  ensembl transcript: ENST00000518174
  gene symbol: TMEM66
  hgvsc: ENST00000518174.1:c.*824T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000430477
  ensembl transcript: ENST00000518340
  gene symbol: TMEM66
  hgvsc: ENST00000518340.1:c.*408-2134T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000427769
  ensembl transcript: ENST00000518296
  gene symbol: TMEM66
  hgvsc: ENST00000518296.1:c.559T>G
  hgvsp: ENSP00000427769.1:p.Tyr187Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133872
  ensembl transcript: ENST00000521934
  gene symbol: TMEM66
  hgvsc: ENST00000521934.1:n.386T>G
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428323
  ensembl transcript: ENST00000523127
  gene symbol: TMEM66
  hgvsc: ENST00000523127.1:c.573T>G
  hgvsp: ENSP00000428323.1:p.Tyr191Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441723
  ensembl transcript: ENST00000536273
  gene symbol: TMEM66
  hgvsc: ENST00000536273.1:c.435T>G
  hgvsp: ENSP00000441723.1:p.Tyr145Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000441351
  ensembl transcript: ENST00000545648
  gene symbol: TMEM66
  hgvsc: ENST00000545648.1:c.435T>G
  hgvsp: ENSP00000441351.1:p.Tyr145Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000256255
  ensembl transcript: ENST00000256255
  gene symbol: TMEM66
  hgvsc: ENST00000256255.6:c.951T>G
  hgvsp: ENSP00000256255.6:p.Tyr317Ter
  variant of: http://identifiers.org/hgnc/28789
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000133872
  ensembl protein: ENSP00000428963
  ensembl transcript: ENST00000520303
  gene symbol: TMEM66
  hgvsc: ENST00000520303.1:c.*658T>G
  variant of: http://identifiers.org/hgnc/28789
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr317Ter
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6068
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64800
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.373042240151875e-4
allele num: 8428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e-1

FS
type: SiteQuality
SIO_000300: 3.699e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.645508e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 886
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2458
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40294
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523322060750084e-5
allele num: 65646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.87e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.569e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.42e-1

QD
type: SiteQuality
SIO_000300: 1.302e1

FS
type: SiteQuality
SIO_000300: 1.0508e1

DP
type: SiteQuality
SIO_000300: 1.665189e6

MQ
type: SiteQuality
SIO_000300: 5.921e1

VQSLOD
type: SiteQuality
SIO_000300: -1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 1567
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6290
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.166316771635176e-4
allele num: 8574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65846
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.668372e6

BaseQRankSum
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SIO_000300: 4.52e0

VQSLOD
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FS
type: SiteQuality
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ClippingRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5148760831364e-5
allele num: 66012
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.557e0

VQSLOD
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SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.75e-1

MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
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SIO_000300: 1.516e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.15e-2

DP
type: SiteQuality
SIO_000300: 1.671583e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10336
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.681913e6

QD
type: SiteQuality
SIO_000300: 3.76e0

MQ
type: SiteQuality
SIO_000300: 5.632e1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.536e0

InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.986e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21300339640951e-4
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502403846153846e-5
allele num: 66560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.683224e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.46e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.69e-1

QD
type: SiteQuality
SIO_000300: 9.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

FS
type: SiteQuality
SIO_000300: 4.22e0

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.209e0

MQRankSum
type: SiteQuality
SIO_000300: 6.65e-1

DP
type: SiteQuality
SIO_000300: 1.683441e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.782e0

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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QD
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.06501698204755e-5
allele num: 16488
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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DP
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

South Asian
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allele num: 16488
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
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Other
type: Population
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.314e0

ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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East Asian
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European (Non-Finnish)
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allele frequency: 3.003544182134919e-5
allele num: 66588
num of homozygotes: 0

MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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MQ
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 10

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3706
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.703703703703704e-3
allele num: 270
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 8.264462809917356e-3
allele num: 1694
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 8.700696055684454e-4
allele num: 3448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.324813631522897e-4
allele num: 1878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 97
allele frequency: 6.358987806476989e-3
allele num: 15254
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

FS
type: SiteQuality
SIO_000300: 7.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.09e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 5.02673e5

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5052
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2090
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6432
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505316273202379e-5
allele num: 66588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 1.683655e6

FS
type: SiteQuality
SIO_000300: 1.238e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41294
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6431
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5054
bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.50558692779046e-5
allele num: 66584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.67e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 1.683468e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.196e0

MQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.67e-1

QD
type: SiteQuality
SIO_000300: 1.061e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 2092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6426
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.654e-1

DP
type: SiteQuality
SIO_000300: 1.683289e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.358e0

QD
type: SiteQuality
SIO_000300: 1.337e1

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41218
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6420
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1584
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.254e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.8e0

FS
type: SiteQuality
SIO_000300: 8.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

DP
type: SiteQuality
SIO_000300: 1.682652e6

MQRankSum
type: SiteQuality
SIO_000300: 3.92e-1

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41013
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 264
allele frequency: 2.555168408826946e-2
allele num: 10332
num of homozygotes: 2

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.130041724617524e-3
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503216884132043e-5
allele num: 66524
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.700504e6

QD
type: SiteQuality
SIO_000300: 1.268e1

FS
type: SiteQuality
SIO_000300: 5.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-1

GenotypeQuality
all individuals: 6397
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5148
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.055101422948834e-4
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214624073849144e-4
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.804782674086329e-4
allele num: 66490
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.68949e6

MQRankSum
type: SiteQuality
SIO_000300: -4.623e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 8.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.216e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

FS
type: SiteQuality
SIO_000300: 1.8196e1

MQ
type: SiteQuality
SIO_000300: 5.729e1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 705
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5148
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 2491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.023913370431643e-5
allele num: 66490
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.429248147698287e-4
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.739130434782609e-4
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.211020284589767e-3
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.623e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

MQ
type: SiteQuality
SIO_000300: 5.729e1

FS
type: SiteQuality
SIO_000300: 1.8196e1

VQSLOD
type: SiteQuality
SIO_000300: -3.216e0

DP
type: SiteQuality
SIO_000300: 1.68949e6

QD
type: SiteQuality
SIO_000300: 8.0e-2

GenotypeQuality
all individuals: 1569
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 701
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5203
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2082
bin: 7.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.159605199807415e-4
allele num: 66464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 13
allele frequency: 1.972087378640777e-3
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.861448711716091e-4
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.31858407079646e-3
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.996e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

FS
type: SiteQuality
SIO_000300: 1.7698e1

MQRankSum
type: SiteQuality
SIO_000300: -4.539e0

MQ
type: SiteQuality
SIO_000300: 5.724e1

DP
type: SiteQuality
SIO_000300: 1.697203e6

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1569
bin: 8.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.516990291262136e-3
allele num: 6592
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.699321047526673e-5
allele num: 10310
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.738828029907842e-4
allele num: 11502
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.076810889645114e-5
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.212389380530973e-3
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.460519980741454e-4
allele num: 66464
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
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SIO_000300: 5.724e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

FS
type: SiteQuality
SIO_000300: 1.7698e1

BaseQRankSum
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SIO_000300: 2.84e0

QD
type: SiteQuality
SIO_000300: 2.9e-1

DP
type: SiteQuality
SIO_000300: 1.697203e6

MQRankSum
type: SiteQuality
SIO_000300: -4.539e0

VQSLOD
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SIO_000300: -2.996e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516990291262136e-4
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.513721714010592e-5
allele num: 66464
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.076810889645114e-5
allele num: 16456
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

MQ
type: SiteQuality
SIO_000300: 5.724e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.996e0

QD
type: SiteQuality
SIO_000300: 2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

FS
type: SiteQuality
SIO_000300: 1.7698e1

MQRankSum
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SIO_000300: -4.539e0

DP
type: SiteQuality
SIO_000300: 1.697203e6

BaseQRankSum
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SIO_000300: 2.84e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516990291262136e-4
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.053201733269138e-4
allele num: 66464
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

MQRankSum
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SIO_000300: -4.539e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

QD
type: SiteQuality
SIO_000300: 2.9e-1

FS
type: SiteQuality
SIO_000300: 1.7698e1

MQ
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SIO_000300: 5.724e1

DP
type: SiteQuality
SIO_000300: 1.697203e6

VQSLOD
type: SiteQuality
SIO_000300: -2.996e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.697203e6

VQSLOD
type: SiteQuality
SIO_000300: -2.996e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.539e0

MQ
type: SiteQuality
SIO_000300: 5.724e1

QD
type: SiteQuality
SIO_000300: 2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

FS
type: SiteQuality
SIO_000300: 1.7698e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.697203e6

QD
type: SiteQuality
SIO_000300: 2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.996e0

MQ
type: SiteQuality
SIO_000300: 5.724e1

MQRankSum
type: SiteQuality
SIO_000300: -4.539e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

FS
type: SiteQuality
SIO_000300: 1.7698e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.225874735400324e-5
allele num: 16062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.736105953707142e-5
allele num: 64632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.721e1

VQSLOD
type: SiteQuality
SIO_000300: -2.221e0

DP
type: SiteQuality
SIO_000300: 1.795769e6

MQRankSum
type: SiteQuality
SIO_000300: -4.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

FS
type: SiteQuality
SIO_000300: 1.803e1

QD
type: SiteQuality
SIO_000300: 1.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2360
bin: 7.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.320831786112143e-4
allele num: 64632
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 13
allele frequency: 2.216160927378111e-3
allele num: 5866
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.762705923589205e-5
allele num: 11412
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.358112314780227e-4
allele num: 16062
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.472222222222222e-3
allele num: 864
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.795769e6

QD
type: SiteQuality
SIO_000300: 1.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.221e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.803e1

MQ
type: SiteQuality
SIO_000300: 5.721e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
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allele num: 16062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.547221190741428e-5
allele num: 64632
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
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allele count: 0
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FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

BaseQRankSum
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SIO_000300: 3.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

DP
type: SiteQuality
SIO_000300: 1.795769e6

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.750437521876094e-5
allele num: 11428
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European (Finnish)
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allele count: 9
allele frequency: 1.493528045137736e-3
allele num: 6026
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Other
type: Population
allele count: 2
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allele num: 874
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 16
allele frequency: 2.464571780653111e-4
allele num: 64920
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South Asian
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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QD
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DP
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MQRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4784
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.625774817281895e-5
allele num: 64854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16080
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.784872e6

MQ
type: SiteQuality
SIO_000300: 5.731e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 3.0626e1

VQSLOD
type: SiteQuality
SIO_000300: -3.307e0

MQRankSum
type: SiteQuality
SIO_000300: -4.364e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-1

QD
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
all individuals: 150
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 2.5e0
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 3

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 2

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4784
bin: 9.75e1
variant carriers: 17

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.467079902550344e-4
allele num: 64854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16080
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.309468822170901e-3
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.755034144633164e-5
allele num: 11422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.505520240883238e-3
allele num: 5978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-1

MQ
type: SiteQuality
SIO_000300: 5.731e1

FS
type: SiteQuality
SIO_000300: 3.0626e1

VQSLOD
type: SiteQuality
SIO_000300: -3.307e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

MQRankSum
type: SiteQuality
SIO_000300: -4.364e0

DP
type: SiteQuality
SIO_000300: 1.784872e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

QD
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41
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GenotypeQuality
all individuals: 4774
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53803562090498e-5
allele num: 65018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

FS
type: SiteQuality
SIO_000300: 1.399e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

DP
type: SiteQuality
SIO_000300: 1.778924e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.39e-1

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2434
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5979
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.001e0

QD
type: SiteQuality
SIO_000300: 1.165e1

VQSLOD
type: SiteQuality
SIO_000300: -1.892e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.278e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.761952e6

MQ
type: SiteQuality
SIO_000300: 5.762e1

GenotypeQuality
all individuals: 2051
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39524
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variant carriers: 0

GenotypeQuality
all individuals: 201
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GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 80
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GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 761
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GenotypeQuality
all individuals: 4784
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2400
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variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6273
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533930543624985e-5
allele num: 65192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.337e1

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.752696e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.56e-1

GenotypeQuality
all individuals: 38578
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 450
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variant carriers: 0

GenotypeQuality
all individuals: 2413
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variant carriers: 0

GenotypeQuality
all individuals: 1503
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.75e1
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GenotypeQuality
all individuals: 144
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65418
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.212e0

QD
type: SiteQuality
SIO_000300: 1.204e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.79e-1

FS
type: SiteQuality
SIO_000300: 5.137e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

DP
type: SiteQuality
SIO_000300: 1.727904e6

GenotypeQuality
all individuals: 713
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 204
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016773259321829e-5
allele num: 66296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.256e0

QD
type: SiteQuality
SIO_000300: 1.355e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.565e0

DP
type: SiteQuality
SIO_000300: 1.713936e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2044
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GenotypeQuality
all individuals: 1544
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65680
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.232859636000998e-5
allele num: 16044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

DP
type: SiteQuality
SIO_000300: 1.684315e6

VQSLOD
type: SiteQuality
SIO_000300: -1.186e-1

FS
type: SiteQuality
SIO_000300: 6.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e-1

QD
type: SiteQuality
SIO_000300: 1.608e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.64e-1

GenotypeQuality
all individuals: 663
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variant carriers: 0

GenotypeQuality
all individuals: 1197
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GenotypeQuality
all individuals: 1570
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GenotypeQuality
all individuals: 234
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GenotypeQuality
all individuals: 1297
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GenotypeQuality
all individuals: 2936
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GenotypeQuality
all individuals: 866
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variant carriers: 0

GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 118
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GenotypeQuality
all individuals: 114
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GenotypeQuality
all individuals: 678
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GenotypeQuality
all individuals: 2058
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.225874735400324e-5
allele num: 16062
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

DP
type: SiteQuality
SIO_000300: 1.689067e6

QD
type: SiteQuality
SIO_000300: 1.432e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

FS
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

MQRankSum
type: SiteQuality
SIO_000300: -9.65e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.9120559114735e-4
allele num: 6868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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FS
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MQRankSum
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SIO_000300: 1.0e0

MQ
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SIO_000300: 6.0e1

ClippingRankSum
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BaseQRankSum
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SIO_000300: -1.12e0

InbreedingCoeff
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SIO_000300: -2.9e-3

VQSLOD
type: SiteQuality
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DP
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SIO_000300: 1.10876e6

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 1.724137931034483e-4
allele num: 5800
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9186
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 50934
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
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BaseQRankSum
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QD
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DP
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InbreedingCoeff
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SIO_000300: -3.3e-3

MQ
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.959017356893782e-5
allele num: 51046
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9218
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

BaseQRankSum
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DP
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QD
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VQSLOD
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SIO_000300: -1.081e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQ
type: SiteQuality
SIO_000300: 5.787e1

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5884
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7000
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.913509376195943e-5
allele num: 52260
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.092e0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.735e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

DP
type: SiteQuality
SIO_000300: 1.222097e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.16e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.418842224744608e-4
allele num: 7048
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9494
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 52548
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 5.659999999999999e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.884e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.880476888939035e-5
allele num: 53178
num of homozygotes: 0

Other
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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DP
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FS
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MQ
type: SiteQuality
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QD
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InbreedingCoeff
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SIO_000300: -1.8e-3

BaseQRankSum
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ClippingRankSum
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SIO_000300: -5.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9078
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6044
num of homozygotes: 0

South Asian
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allele frequency: 2.663825253063399e-4
allele num: 15016
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.312178e6

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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ReadPosRankSum
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FS
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 8.609999999999999e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.668801708033093e-4
allele num: 7494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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VQSLOD
type: SiteQuality
SIO_000300: 3.92e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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FS
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ReadPosRankSum
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SIO_000300: 2.33e-1

DP
type: SiteQuality
SIO_000300: 1.361068e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.662e0

GenotypeQuality
all individuals: 1790
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.535093451836362e-5
allele num: 15302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

QD
type: SiteQuality
SIO_000300: 8.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.359e-1

DP
type: SiteQuality
SIO_000300: 1.373951e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1157
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.205128205128205e-5
allele num: 62400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.137e-1

DP
type: SiteQuality
SIO_000300: 1.480387e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.579e0

MQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.782e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 9.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64092
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.580379520229145e-4
allele num: 11172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.294e0

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 1.528005e6

VQSLOD
type: SiteQuality
SIO_000300: -2.526e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.94e-1

QD
type: SiteQuality
SIO_000300: 1.586e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1931
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GenotypeQuality
all individuals: 5475
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.742790335151988e-5
allele num: 10264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

QD
type: SiteQuality
SIO_000300: 1.574e1

DP
type: SiteQuality
SIO_000300: 1.562139e6

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 674
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66328
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 2.407e0

QD
type: SiteQuality
SIO_000300: 1.392e1

VQSLOD
type: SiteQuality
SIO_000300: -7.81e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.236e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.925e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.88e0

DP
type: SiteQuality
SIO_000300: 1.603592e6

GenotypeQuality
all individuals: 665
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505570611261668e-5
allele num: 66420
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.669999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.882e1

FS
type: SiteQuality
SIO_000300: 2.872e0

DP
type: SiteQuality
SIO_000300: 1.610187e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.409e0

QD
type: SiteQuality
SIO_000300: 1.288e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65472
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.177415369409439e-5
allele num: 16188
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.049e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

QD
type: SiteQuality
SIO_000300: 1.469e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.653e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

DP
type: SiteQuality
SIO_000300: 1.618719e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.718395815170009e-5
allele num: 11470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65140
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.858e0

QD
type: SiteQuality
SIO_000300: 7.88e0

VQSLOD
type: SiteQuality
SIO_000300: -1.936e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

DP
type: SiteQuality
SIO_000300: 1.665626e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.02e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

FS
type: SiteQuality
SIO_000300: 8.352e0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44004
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5543
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65140
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.937e1

VQSLOD
type: SiteQuality
SIO_000300: -1.936e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

FS
type: SiteQuality
SIO_000300: 8.352e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.02e-1

DP
type: SiteQuality
SIO_000300: 1.665626e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.858e0

QD
type: SiteQuality
SIO_000300: 7.88e0

GenotypeQuality
all individuals: 5550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.718395815170009e-5
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65072
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.673323e6

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

QD
type: SiteQuality
SIO_000300: 1.771e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.555e-1

FS
type: SiteQuality
SIO_000300: 6.335e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4965
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43922
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

FS
type: SiteQuality
SIO_000300: 2.774e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.215e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.75e-1

DP
type: SiteQuality
SIO_000300: 1.678504e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
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variant carriers: 0

GenotypeQuality
all individuals: 43917
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5582
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4966
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1975
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.999e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

MQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.82e-1

QD
type: SiteQuality
SIO_000300: 1.152e1

FS
type: SiteQuality
SIO_000300: 6.318e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

DP
type: SiteQuality
SIO_000300: 1.678671e6

GenotypeQuality
all individuals: 5584
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43913
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.57e-1

DP
type: SiteQuality
SIO_000300: 1.67868e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.48e1

FS
type: SiteQuality
SIO_000300: 2.051e0

VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

GenotypeQuality
all individuals: 4968
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43913
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 5.125e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.892e0

VQSLOD
type: SiteQuality
SIO_000300: 3.56e-1

QD
type: SiteQuality
SIO_000300: 1.592e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

DP
type: SiteQuality
SIO_000300: 1.67887e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 476
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4968
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1782
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 5581
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43909
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

VQSLOD
type: SiteQuality
SIO_000300: 5.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.367e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

DP
type: SiteQuality
SIO_000300: 1.679034e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 86
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24475
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.552221202987813e-5
allele num: 15262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.04e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

VQSLOD
type: SiteQuality
SIO_000300: -1.224e0

DP
type: SiteQuality
SIO_000300: 4.99802e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

QD
type: SiteQuality
SIO_000300: 1.625e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1214
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.849315068493151e-4
allele num: 1460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.632e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

VQSLOD
type: SiteQuality
SIO_000300: -3.641e0

QD
type: SiteQuality
SIO_000300: 3.52e0

MQ
type: SiteQuality
SIO_000300: 5.845e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.87e-2

DP
type: SiteQuality
SIO_000300: 4.50965e5

GenotypeQuality
all individuals: 29136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 940
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2224
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.038781163434903e-3
allele num: 2888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.24945e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.29e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.742e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.1e0

VQSLOD
type: SiteQuality
SIO_000300: -3.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 5.007e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1078
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.673769287288758e-4
allele num: 2722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1884
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.06928e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.62e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

QD
type: SiteQuality
SIO_000300: 6.55e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.57e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.55e-1

FS
type: SiteQuality
SIO_000300: 3.126e0

DP
type: SiteQuality
SIO_000300: 1.67897e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

GenotypeQuality
all individuals: 4968
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1973
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.994e0

DP
type: SiteQuality
SIO_000300: 1.679321e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.599e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

VQSLOD
type: SiteQuality
SIO_000300: -2.339e0

FS
type: SiteQuality
SIO_000300: 1.1778e1

QD
type: SiteQuality
SIO_000300: 7.25e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.671e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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DP
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.679483e6

MQRankSum
type: SiteQuality
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FS
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
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SIO_000300: 5.966e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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