2-66794697-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794697
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794697
    reference: chr 2
allele count: 3
allele frequency: 4.132914531327492e-5
allele num: 72588
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.1078A>G
  hgvsp: ENSP00000454209.1:p.Ser360Gly
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+54A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+54A>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser360Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

2-66794707-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794707
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794707
    reference: chr 2
allele count: 1
allele frequency: 1.645007402533311e-5
allele num: 60790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.1088C>T
  hgvsp: ENSP00000454209.1:p.Pro363Leu
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+64C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+64C>T
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro363Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

2-66794708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794708
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794708
    reference: chr 2
allele count: 2
allele frequency: 3.33522329319948e-5
allele num: 59966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.1089G>A
  hgvsp: ENST00000560281.2:c.1089G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+65G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+65G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15734
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro363Pro
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-66794717-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794717
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794717
    reference: chr 2
allele count: 1
allele frequency: 1.996884859618994e-5
allele num: 50078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.1098G>A
  hgvsp: ENST00000560281.2:c.1098G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+74G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31120
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro366Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

2-66794719-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794719
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794719
    reference: chr 2
allele count: 1
allele frequency: 2.037323771493766e-5
allele num: 49084
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.1100T>C
  hgvsp: ENSP00000454209.1:p.Leu367Pro
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+76T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+76T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu367Pro
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

2-66794726-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794726
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794726
    reference: chr 2
allele count: 1
allele frequency: 2.301072299691656e-5
allele num: 43458
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.1107T>C
  hgvsp: ENST00000560281.2:c.1107T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+83T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+83T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10524
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15809
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly369Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/2-66794729-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794729
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794729
    reference: chr 2
allele count: 3
allele frequency: 7.256191950464396e-5
allele num: 41344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.1110A>C
  hgvsp: ENSP00000454209.1:p.Lys370Asn
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+86A>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+86A>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9715
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys370Asn
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

2-66794734-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794734
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794734
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 38932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.*2C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+91C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+91C>T
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20355
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

2-66794737-GGAGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794737
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794733
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 37262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+99_*33+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+99_*119+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+99_1024+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+99_*310+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+99_1018+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+99_1024+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.*10_*13delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+99_1024+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+99_829+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+99_479+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+99_338+102delGAGT
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19389
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: GGAGT
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

2-66794740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794740
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794740
    reference: chr 2
allele count: 4
allele frequency: 1.141682840506907e-4
allele num: 35036
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+97G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.*8G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7506
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

2-66794740-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794740
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794741
    reference: chr 2
allele count: 1
allele frequency: 2.854207101267268e-5
allele num: 35036
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.*9dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+98dupT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+98dupT
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17765
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

2-66794746-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794746
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794746
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 31482
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+103A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.*14A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+103A>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14778
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

2-66794752-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794752
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794752
    reference: chr 2
allele count: 2
allele frequency: 7.529553497477599e-5
allele num: 26562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.*20A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+109A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+109A>T
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12242
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30160
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

2-66794769-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66794769
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66794769
    reference: chr 2
allele count: 1
allele frequency: 4.662439388287953e-5
allele num: 21448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*33+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*310+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1024+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.479+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1024+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1024+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1018+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000454209
  ensembl transcript: ENST00000560281
  gene symbol: MEIS1
  hgvsc: ENST00000560281.2:c.*37T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.829+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*119+126T>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.338+126T>A
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-66795753-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795753
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795753
    reference: chr 2
allele count: 1
allele frequency: 8.288575028181154e-6
allele num: 120648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-46G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-46G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

2-66795756-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795756
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795756
    reference: chr 2
allele count: 1
allele frequency: 8.288437629506838e-6
allele num: 120650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-43C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-43C>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

2-66795758-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795758
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795758
    reference: chr 2
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-41C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-41C>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2994
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

2-66795761-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795761
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795761
    reference: chr 2
allele count: 1
allele frequency: 8.287613333112331e-6
allele num: 120662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-38A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-38A>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48571
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

2-66795765-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795765
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795765
    reference: chr 2
allele count: 2
allele frequency: 1.657412778652524e-5
allele num: 120670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-34T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-34T>G
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

2-66795769-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795769
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795769
    reference: chr 2
allele count: 1
allele frequency: 8.286651861182008e-6
allele num: 120676
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-30A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-30A>G
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

2-66795771-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795771
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795771
    reference: chr 2
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-28T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum

2-66795772-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795772
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795772
    reference: chr 2
allele count: 1
allele frequency: 8.286789200656313e-6
allele num: 120674
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-27A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-27A>G
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2720
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-66795772-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795772
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795772
    reference: chr 2
allele count: 2
allele frequency: 1.657357840131263e-5
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-27A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-27A>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-66795777-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795777
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795777
    reference: chr 2
allele count: 1
allele frequency: 8.286102548805144e-6
allele num: 120684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-22A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-22A>G
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

2-66795778-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795778
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795778
    reference: chr 2
allele count: 1
allele frequency: 8.285965232089886e-6
allele num: 120686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-21C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-21C>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-66795786-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795786
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795786
    reference: chr 2
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-13T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-13T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-66795794-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795794
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795794
    reference: chr 2
allele count: 1
allele frequency: 8.285004142502071e-6
allele num: 120700
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1025-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.339-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*311-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1025-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1019-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.480-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.830-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*34-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1025-5T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*120-5T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1025-5T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

2-66795810-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795810
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795810
    reference: chr 2
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*131A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.841A>T
  hgvsp: ENSP00000440571.1:p.Thr281Ser
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1036A>T
  hgvsp: ENSP00000384461.2:p.Thr346Ser
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1030A>T
  hgvsp: ENSP00000381518.2:p.Thr344Ser
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.491A>T
  hgvsp: ENSP00000395827.2:p.Thr165Ser
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*322A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.350A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*45A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1036A>T
  hgvsp: ENSP00000272369.8:p.Thr346Ser
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1036A>T
  hgvsp: ENSP00000475161.1:p.Thr346Ser
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1585
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr346Ser
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

2-66795812-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795812
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795812
    reference: chr 2
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1038A>G
  hgvsp: ENST00000272369.9:c.1038A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1032A>G
  hgvsp: ENST00000398506.2:c.1032A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1038A>G
  hgvsp: ENST00000407092.2:c.1038A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.493A>G
  hgvsp: ENST00000450027.1:c.493A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1038A>G
  hgvsp: ENST00000488550.1:c.1038A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*133A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.352A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*324A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.843A>G
  hgvsp: ENST00000495021.2:c.843A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*47A>G
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr346Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

2-66795818-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795818
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795818
    reference: chr 2
allele count: 2
allele frequency: 1.656232402530723e-5
allele num: 120756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*330T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*53T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*139T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.358T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1044T>C
  hgvsp: ENST00000488550.1:c.1044T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1044T>C
  hgvsp: ENST00000272369.9:c.1044T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.499T>C
  hgvsp: ENST00000450027.1:c.499T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.849T>C
  hgvsp: ENST00000495021.2:c.849T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1038T>C
  hgvsp: ENST00000398506.2:c.1038T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1044T>C
  hgvsp: ENST00000407092.2:c.1044T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr348Tyr
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

2-66795839-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795839
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795839
    reference: chr 2
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.379G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1065G>A
  hgvsp: ENSP00000384461.2:p.Met355Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1059G>A
  hgvsp: ENSP00000381518.2:p.Met353Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*351G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*160G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1065G>A
  hgvsp: ENSP00000272369.8:p.Met355Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.870G>A
  hgvsp: ENSP00000440571.1:p.Met290Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1065G>A
  hgvsp: ENSP00000475161.1:p.Met355Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*74G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.520G>A
  hgvsp: ENSP00000395827.2:p.Met174Ile
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2794
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48586
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Met355Ile
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

2-66795844-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795844
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795844
    reference: chr 2
allele count: 2
allele frequency: 1.656204971927326e-5
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.525G>A
  hgvsp: ENSP00000395827.2:p.Gly176Asp
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.384G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.875G>A
  hgvsp: ENSP00000440571.1:p.Gly292Asp
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1070G>A
  hgvsp: ENSP00000272369.8:p.Gly357Asp
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475982
  ensembl transcript: ENST00000606455
  gene symbol: MEIS1
  hgvsc: ENST00000606455.1:c.*79G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1070G>A
  hgvsp: ENSP00000475161.1:p.Gly357Asp
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1070G>A
  hgvsp: ENSP00000384461.2:p.Gly357Asp
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1064G>A
  hgvsp: ENSP00000381518.2:p.Gly355Asp
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*356G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*165G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly357Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

2-66795849-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795849
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795849
    reference: chr 2
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1069G>A
  hgvsp: ENSP00000381518.2:p.Val357Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.389G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.530G>A
  hgvsp: ENSP00000395827.2:p.Val178Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1075G>A
  hgvsp: ENSP00000384461.2:p.Val359Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1075G>A
  hgvsp: ENSP00000272369.8:p.Val359Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.880G>A
  hgvsp: ENSP00000440571.1:p.Val294Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*170G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1075G>A
  hgvsp: ENSP00000475161.1:p.Val359Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*361G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val359Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

2-66795854-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795854
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795854
    reference: chr 2
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1080G>T
  hgvsp: ENSP00000384461.2:p.Met360Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.885G>T
  hgvsp: ENSP00000440571.1:p.Met295Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.535G>T
  hgvsp: ENSP00000395827.2:p.Met179Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1074G>T
  hgvsp: ENSP00000381518.2:p.Met358Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1080G>T
  hgvsp: ENSP00000475161.1:p.Met360Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*366G>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.394G>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1080G>T
  hgvsp: ENSP00000272369.8:p.Met360Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*175G>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met360Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

2-66795857-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795857
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795857
    reference: chr 2
allele count: 239
allele frequency: 1.979197721024214e-3
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.397C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1083C>T
  hgvsp: ENST00000272369.9:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*178C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.538C>T
  hgvsp: ENST00000450027.1:c.538C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1083C>T
  hgvsp: ENST00000488550.1:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*369C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1083C>T
  hgvsp: ENST00000407092.2:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1077C>T
  hgvsp: ENST00000398506.2:c.1077C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.888C>T
  hgvsp: ENST00000495021.2:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 9.75e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp361Asp
num of homozygotes: 2
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ

2-66795870-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795870
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795870
    reference: chr 2
allele count: 2
allele frequency: 1.656204971927326e-5
allele num: 120758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*382A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000395827
  ensembl transcript: ENST00000450027
  gene symbol: MEIS1
  hgvsc: ENST00000450027.1:c.551A>T
  hgvsp: ENSP00000395827.2:p.Met185Leu
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1096A>T
  hgvsp: ENSP00000384461.2:p.Met366Leu
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1096A>T
  hgvsp: ENSP00000272369.8:p.Met366Leu
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1090A>T
  hgvsp: ENSP00000381518.2:p.Met364Leu
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1096A>T
  hgvsp: ENSP00000475161.1:p.Met366Leu
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.410A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.901A>T
  hgvsp: ENSP00000440571.1:p.Met301Leu
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*191A>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7925
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met366Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

2-66795895-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795895
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795893
    reference: chr 2
allele count: 1
allele frequency: 8.282122210995345e-6
allele num: 120742
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+9_*209+10delTT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+9_428+10delTT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+9_1108+10delTT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+9_1114+10delTT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+9_919+10delTT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+9_*400+10delTT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1123_1124delTT
  hgvsp: ENSP00000475161.1:p.Leu375ValfsTer9
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+9_1114+10delTT
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu375ValfsTer9
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CTT
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

2-66795899-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795899
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795899
    reference: chr 2
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+11G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+11G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1125G>A
  hgvsp: ENST00000488550.1:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+11G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+11G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+11G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+11G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+11G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu375Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

2-66795903-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795903
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795903
    reference: chr 2
allele count: 1
allele frequency: 8.282122210995345e-6
allele num: 120742
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+15T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+15T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+15T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+15T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1129T>C
  hgvsp: ENST00000488550.1:c.1129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+15T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+15T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+15T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48551
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu377Leu
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

2-66795906-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795906
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795906
    reference: chr 2
allele count: 3337
allele frequency: 2.763835743510742e-2
allele num: 120738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1132T>C
  hgvsp: ENSP00000475161.1:p.Trp378Arg
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+18T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+18T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+18T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+18T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+18T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+18T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+18T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4119
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 7.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 10288
  bin: 9.75e1
  variant carriers: 2979
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 8.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 8.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 6.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48947
  bin: 9.75e1
  variant carriers: 3266
hgvs: p.Trp378Arg
num of homozygotes: 68
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

2-66795907-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795907
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795907
    reference: chr 2
allele count: 2
allele frequency: 1.656451880072884e-5
allele num: 120740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+19G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+19G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+19G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+19G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+19G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.1133G>A
  hgvsp: ENSP00000475161.1:p.Trp378Ter
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+19G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+19G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7804
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Trp378Ter
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-66795921-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795921
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795921
    reference: chr 2
allele count: 1
allele frequency: 8.283357078956959e-6
allele num: 120724
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+33T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+33T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+33T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*10T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+33T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+33T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+33T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+33T>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4909
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

2-66795923-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795923
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795923
    reference: chr 2
allele count: 1
allele frequency: 8.284043275842073e-6
allele num: 120714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+35T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+35T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*12T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+35T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+35T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+35T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+35T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+35T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1528
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

2-66795950-A-AACACAGGTAAATCCGCCTCATCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795950
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795973
    reference: chr 2
allele count: 4
allele frequency: 3.315759806359627e-5
allele num: 120636
alternate allele: AACACAGGTAAATCCGCCTCATCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum

2-66795957-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795957
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795957
    reference: chr 2
allele count: 1
allele frequency: 8.289124668435012e-6
allele num: 120640
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+69G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+69G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+69G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+69G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+69G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+69G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+69G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*46G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7804
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48410
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS

2-66795957-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66795957
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66795957
    reference: chr 2
allele count: 2
allele frequency: 1.657824933687002e-5
allele num: 120640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+69G>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1114+69G>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+69G>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+69G>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*46G>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.428+69G>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.919+69G>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+69G>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7804
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1505
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48410
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

2-66796137-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796137
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796137
    reference: chr 2
allele count: 6
allele frequency: 4.968532626697582e-5
allele num: 120760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.920-45T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1115-45T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+249T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+249T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*226T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+249T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.429-45T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+249T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28922
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-66796138-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796138
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796138
    reference: chr 2
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1115-44T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+250T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.920-44T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*227T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+250T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+250T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.429-44T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+250T>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28922
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

2-66796154-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796154
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796154
    reference: chr 2
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.920-28T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+266T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1115-28T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+266T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+266T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.429-28T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+266T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*243T>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28922
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54709
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/2-66796155-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796155
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796155
    reference: chr 2
allele count: 20
allele frequency: 1.656150113446283e-4
allele num: 120762
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*244C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.429-27C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+267C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+267C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1115-27C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.920-27C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+267C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+267C>A
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28924
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

2-66796156-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796156
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796156
    reference: chr 2
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.429-26T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+268T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+268T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*245T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+268T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.920-26T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1115-26T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+268T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28918
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/2-66796175-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796175
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796175
    reference: chr 2
allele count: 2
allele frequency: 1.656122685568547e-5
allele num: 120764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.429-7C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+287C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+287C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+287C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*264C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.920-7C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1115-7C>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+287C>A
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28918
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1115-7C>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

2-66796184-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796184
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796184
    reference: chr 2
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+296C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*273C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1117C>T
  hgvsp: ENSP00000272369.8:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+296C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.431C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+296C>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.922C>T
  hgvsp: ENSP00000440571.1:p.Pro308Ser
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+296C>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28919
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54709
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro373Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-66796185-CTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796185
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796183
    reference: chr 2
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.925_926delAT
  hgvsp: ENSP00000440571.1:p.Met309GlufsTer21
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+299_1114+300delAT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+299_*400+300delAT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.434_435delAT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+299_1108+300delAT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+299_*209+300delAT
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1120_1121delAT
  hgvsp: ENSP00000272369.8:p.Met374GlufsTer21
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*276_*277delAT
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28918
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met374GlufsTer21
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: CTA
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

2-66796187-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796187
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796187
    reference: chr 2
allele count: 2
allele frequency: 1.656150113446283e-5
allele num: 120762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.434A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+299A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+299A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.1120A>G
  hgvsp: ENSP00000272369.8:p.Met374Val
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+299A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*276A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+299A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.925A>G
  hgvsp: ENSP00000440571.1:p.Met309Val
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28920
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2620
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met374Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

2-66796218-A-AGGGGCAGTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796218
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796227
    reference: chr 2
allele count: 2
allele frequency: 1.656177542232527e-5
allele num: 120760
alternate allele: AGGGGCAGTG
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsp: ENSP00000272369.8:p.Gly385_Trp387dup
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.958_966dupGGGCAGTGG
  hgvsp: ENSP00000440571.1:p.Gly320_Trp322dup
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.467_475dupGGGCAGTGG
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28918
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly385_Trp387dup
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

2-66796244-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796244
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796244
    reference: chr 2
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.491T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+356T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*333T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*4T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+356T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*4T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+356T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+356T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28918
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

2-66796259-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796259
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796259
    reference: chr 2
allele count: 5
allele frequency: 4.141953013685013e-5
allele num: 120716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.506A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+371A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+371A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+371A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*348A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*19A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+371A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*19A>T
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28922
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

2-66796262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796262
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796262
    reference: chr 2
allele count: 2
allele frequency: 1.657000828500414e-5
allele num: 120700
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*22G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*351G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*22G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.509G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+374G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+374G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+374G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+374G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28920
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2414
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

2-66796267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796267
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796267
    reference: chr 2
allele count: 233
allele frequency: 1.930405965202983e-3
allele num: 120700
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*27G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+379G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+379G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*356G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+379G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.514G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*27G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+379G>A
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28966
  bin: 9.75e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54694
  bin: 9.75e1
  variant carriers: 229
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 4
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

2-66796272-G-GGGGAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796272
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796277
    reference: chr 2
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: GGGGAA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*34_*37+1dupGGAAG
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+386_*400+390dupGGAAG
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*363_*367dupGGAAG
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.521_524+1dupGGAAG
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*34_*37+1dupGGAAG
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+386_*209+390dupGGAAG
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+386_1108+390dupGGAAG
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+386_1114+390dupGGAAG
  variant of: http://identifiers.org/hgnc/7000
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28893
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum

2-66796287-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66796287
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66796287
    reference: chr 2
allele count: 1
allele frequency: 8.288300235387727e-6
allele num: 120652
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*37+10A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.524+10A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*376A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1114+399A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*400+399A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1108+399A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*37+10A>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*209+399A>T
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28893
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54681
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

2-66798332-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66798332
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66798332
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 18272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*2421T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*210-46T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1115-46T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*401-46T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*38-46T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1109-46T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.525-46T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*38-46T>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32031
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12986
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5354
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5057
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6554
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-66798342-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66798342
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66798342
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 18708
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*2431T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*210-36T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*38-36T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1109-36T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1115-36T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.525-36T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*401-36T>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*38-36T>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 30279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15588
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-66798347-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66798347
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66798347
    reference: chr 2
allele count: 27
allele frequency: 1.422100495101654e-3
allele num: 18986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.525-31T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*401-31T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*2436T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1109-31T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*38-31T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1115-31T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*210-31T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*38-31T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28867
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17316
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24936
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2575
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

2-66798350-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66798350
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66798350
    reference: chr 2
allele count: 1
allele frequency: 5.218661935079846e-5
allele num: 19162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1115-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*401-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*210-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*38-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*38-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1109-28T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*2439T>C
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.525-28T>C
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

2-66798367-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66798367
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66798367
    reference: chr 2
allele count: 1
allele frequency: 4.532680627322999e-5
allele num: 22062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*210-11A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.525-11A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*38-11A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*38-11A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*2456A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1109-11A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1115-11A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*401-11A>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30657
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

2-66798378-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66798378
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66798378
    reference: chr 2
allele count: 1
allele frequency: 3.76081233546446e-5
allele num: 26590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.525G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475222
  ensembl transcript: ENST00000542964
  gene symbol: MEIS1
  hgvsc: ENST00000542964.1:c.*401G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1115G>A
  hgvsp: ENSP00000384461.2:p.Gly372Glu
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*38G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*38G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*2467G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*210G>A
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1109G>A
  hgvsp: ENSP00000381518.2:p.Gly370Glu
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4304
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly370Glu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-66798389-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66798389
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66798389
    reference: chr 2
allele count: 1
allele frequency: 2.97441998810232e-5
allele num: 33620
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1120A>G
  hgvsp: ENSP00000381518.2:p.Met374Val
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*49A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*49A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*221A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1126A>G
  hgvsp: ENSP00000384461.2:p.Met376Val
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*2478A>G
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.536A>G
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5911
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met374Val
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

2-66798391-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66798391
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 66798391
    reference: chr 2
allele count: 3
allele frequency: 8.706251088281386e-5
allele num: 34458
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000384461
  ensembl transcript: ENST00000407092
  gene symbol: MEIS1
  hgvsc: ENST00000407092.2:c.1128G>T
  hgvsp: ENSP00000384461.2:p.Met376Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000403206
  ensembl transcript: ENST00000444274
  gene symbol: MEIS1
  hgvsc: ENST00000444274.2:c.*223G>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000440571
  ensembl transcript: ENST00000495021
  gene symbol: MEIS1
  hgvsc: ENST00000495021.2:c.*51G>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000381518
  ensembl transcript: ENST00000398506
  gene symbol: MEIS1
  hgvsc: ENST00000398506.2:c.1122G>T
  hgvsp: ENSP00000381518.2:p.Met374Ile
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000272369
  ensembl transcript: ENST00000272369
  gene symbol: MEIS1
  hgvsc: ENST00000272369.9:c.*51G>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143995
  ensembl protein: ENSP00000475161
  ensembl transcript: ENST00000488550
  gene symbol: MEIS1
  hgvsc: ENST00000488550.1:c.*2480G>T
  variant of: http://identifiers.org/hgnc/7000
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143995
  ensembl transcript: ENST00000409517
  gene symbol: MEIS1
  hgvsc: ENST00000409517.1:n.538G>T
  variant of: http://identifiers.org/hgnc/7000
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met374Ile
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 222
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34040
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8706
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4586
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.092427560217956e-5
allele num: 39274
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.591849729385546e-4
allele num: 6282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11710
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.946e1

VQSLOD
type: SiteQuality
SIO_000300: -1.032e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

DP
type: SiteQuality
SIO_000300: 1.002632e6

GenotypeQuality
all individuals: 1665
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.091190108191654e-5
allele num: 32350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3798
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3767e1

DP
type: SiteQuality
SIO_000300: 9.17981e5

VQSLOD
type: SiteQuality
SIO_000300: -1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

MQ
type: SiteQuality
SIO_000300: 5.839e1

QD
type: SiteQuality
SIO_000300: 2.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4586
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5242
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.285051067780872e-5
allele num: 10770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.136959658698789e-5
allele num: 31878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.912e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -2.284e0

DP
type: SiteQuality
SIO_000300: 9.15088e5

QD
type: SiteQuality
SIO_000300: 2.424e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.419e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.68e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.72e-1

GenotypeQuality
all individuals: 10934
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 893
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variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3062
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.938382031405287e-5
allele num: 10062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25926
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4454
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: -1.399e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.911e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.99e-1

FS
type: SiteQuality
SIO_000300: 1.0649e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.48e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.76e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

DP
type: SiteQuality
SIO_000300: 8.46601e5

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

GenotypeQuality
all individuals: 4585
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 349
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 219
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GenotypeQuality
all individuals: 451
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.939799858167205e-5
allele num: 25382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2922
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.41e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.029e0

MQ
type: SiteQuality
SIO_000300: 5.601e1

MQRankSum
type: SiteQuality
SIO_000300: 3.18e0

DP
type: SiteQuality
SIO_000300: 8.30229e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e0

FS
type: SiteQuality
SIO_000300: 6.808e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

QD
type: SiteQuality
SIO_000300: 1.537e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 216
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variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.420866489832007e-4
allele num: 2262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.668e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.761e-1

DP
type: SiteQuality
SIO_000300: 7.87677e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.05e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.192e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1014
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 433
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2086
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.204443494979705e-4
allele num: 9362
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.65e0

FS
type: SiteQuality
SIO_000300: 1.834e0

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.323e1

DP
type: SiteQuality
SIO_000300: 7.66649e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.35e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.396e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 433
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.652e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.16e0

DP
type: SiteQuality
SIO_000300: 7.44226e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 214
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GenotypeQuality
all individuals: 864
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variant carriers: 0

GenotypeQuality
all individuals: 318
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GenotypeQuality
all individuals: 426
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1718
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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ReadPosRankSum
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FS
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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African
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East Asian
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European (Non-Finnish)
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Latino
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FS
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VQSLOD
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DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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African
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Other
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BaseQRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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InbreedingCoeff
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FS
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ClippingRankSum
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BaseQRankSum
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QD
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MQ
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MQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

African
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European (Finnish)
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Latino
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East Asian
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South Asian
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Other
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MQ
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QD
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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African
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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FS
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MQ
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QD
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Other
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Latino
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South Asian
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FS
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QD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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FS
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MQ
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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South Asian
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Latino
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InbreedingCoeff
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VQSLOD
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QD
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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African
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MQ
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BaseQRankSum
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DP
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MQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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Latino
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Other
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European (Non-Finnish)
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DP
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VQSLOD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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QD
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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FS
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MQ
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQRankSum
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QD
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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MQ
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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DP
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ClippingRankSum
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FS
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InbreedingCoeff
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East Asian
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African
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South Asian
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MQ
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QD
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VQSLOD
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DP
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.062075654704171e-5
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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QD
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FS
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VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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European (Non-Finnish)
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allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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Other
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South Asian
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allele frequency: 0.0e0
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African
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QD
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BaseQRankSum
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DP
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ClippingRankSum
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VQSLOD
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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African
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Other
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QD
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele num: 11576
num of homozygotes: 0

South Asian
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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BaseQRankSum
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DP
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QD
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MQ
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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South Asian
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African
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allele num: 9800
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Latino
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East Asian
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Other
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DP
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BaseQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 9800
num of homozygotes: 0

East Asian
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Latino
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European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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MQ
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MQRankSum
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BaseQRankSum
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DP
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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VQSLOD
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DP
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QD
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Other
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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num of homozygotes: 0

MQ
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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DP
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VQSLOD
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

FS
type: SiteQuality
SIO_000300: 4.541e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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SIO_000300: 1.039e1

VQSLOD
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SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

DP
type: SiteQuality
SIO_000300: 4.044045e6

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

FS
type: SiteQuality
SIO_000300: 1.717e0

QD
type: SiteQuality
SIO_000300: 1.192e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.084e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e-1

DP
type: SiteQuality
SIO_000300: 4.044058e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 237

Latino
type: Population
allele count: 8
allele frequency: 6.912044237083118e-4
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.454342984409799e-3
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.559721802237678e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 196
allele frequency: 2.0e-2
allele num: 9800
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.896064974375881e-4
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.219e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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SIO_000300: 4.088323e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 1.841e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

VQSLOD
type: SiteQuality
SIO_000300: 7.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.75e-1

DP
type: SiteQuality
SIO_000300: 4.043607e6

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

QD
type: SiteQuality
SIO_000300: 1.399e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.65e0

GenotypeQuality
all individuals: 1553
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

QD
type: SiteQuality
SIO_000300: 2.085e1

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.61e-2

DP
type: SiteQuality
SIO_000300: 4.041919e6

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.041634e6

QD
type: SiteQuality
SIO_000300: 1.221e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 880
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.266e0

FS
type: SiteQuality
SIO_000300: 6.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

DP
type: SiteQuality
SIO_000300: 4.041409e6

VQSLOD
type: SiteQuality
SIO_000300: -9.527e-1

QD
type: SiteQuality
SIO_000300: 1.686e1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 1

African
type: Population
allele count: 69
allele frequency: 7.045129671227282e-3
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 76
allele frequency: 1.149077713940127e-2
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 477
allele frequency: 2.889508117276472e-2
allele num: 16508
num of homozygotes: 9

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
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European (Non-Finnish)
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allele count: 2466
allele frequency: 3.695710817372538e-2
allele num: 66726
num of homozygotes: 53

Latino
type: Population
allele count: 217
allele frequency: 1.874891999308795e-2
allele num: 11574
num of homozygotes: 6

Other
type: Population
allele count: 32
allele frequency: 3.563474387527839e-2
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.41e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

ReadPosRankSum
type: SiteQuality
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FS
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MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-2

DP
type: SiteQuality
SIO_000300: 4.340378e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 48
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.462e1

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

FS
type: SiteQuality
SIO_000300: 2.298e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.843e0

VQSLOD
type: SiteQuality
SIO_000300: 9.61e-1

DP
type: SiteQuality
SIO_000300: 4.036961e6

MQ
type: SiteQuality
SIO_000300: 5.978e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

DP
type: SiteQuality
SIO_000300: 4.036346e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.091e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

QD
type: SiteQuality
SIO_000300: 1.34e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021033285685113e-4
allele num: 9794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.484e0

DP
type: SiteQuality
SIO_000300: 4.036276e6

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

QD
type: SiteQuality
SIO_000300: 1.113e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 1756
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.99880023995201e-5
allele num: 66680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

DP
type: SiteQuality
SIO_000300: 4.033086e6

FS
type: SiteQuality
SIO_000300: 5.287e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.062e0

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.261e1

QD
type: SiteQuality
SIO_000300: 2.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
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variant carriers: 0

GenotypeQuality
all individuals: 101
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variant carriers: 0

GenotypeQuality
all individuals: 1753
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1505
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variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.022076860179886e-4
allele num: 9784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.345e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

DP
type: SiteQuality
SIO_000300: 4.030961e6

VQSLOD
type: SiteQuality
SIO_000300: 9.57e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 3.263e0

GenotypeQuality
all individuals: 1428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 1753
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variant carriers: 0

GenotypeQuality
all individuals: 1100
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variant carriers: 0

GenotypeQuality
all individuals: 79
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 197
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999220202747286e-5
allele num: 66684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

FS
type: SiteQuality
SIO_000300: 3.263e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.345e0

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

DP
type: SiteQuality
SIO_000300: 4.030961e6

VQSLOD
type: SiteQuality
SIO_000300: 9.57e-1

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.634161114476075e-4
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.526e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

DP
type: SiteQuality
SIO_000300: 5.824251e6

FS
type: SiteQuality
SIO_000300: 2.183e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

FS
type: SiteQuality
SIO_000300: 1.404e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 5.824212e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.292e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.923e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -9.993e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

MQRankSum
type: SiteQuality
SIO_000300: -1.28e-1

FS
type: SiteQuality
SIO_000300: 8.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.387e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.683e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 5.824435e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 20

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 565
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variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.54750344662231e-4
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.273e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.825575e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.321e0

DP
type: SiteQuality
SIO_000300: 5.824375e6

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.33e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.843e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

VQSLOD
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SIO_000300: -3.334e-1

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

VQSLOD
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FS
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ClippingRankSum
type: SiteQuality
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

DP
type: SiteQuality
SIO_000300: 5.824661e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.832e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 7.5e-3

MQRankSum
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SIO_000300: 5.03e-1

FS
type: SiteQuality
SIO_000300: 1.528e0

DP
type: SiteQuality
SIO_000300: 5.8245e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.11e-1

QD
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SIO_000300: 1.318e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.453e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.824534e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

QD
type: SiteQuality
SIO_000300: 1.921e1

MQ
type: SiteQuality
SIO_000300: 6.032e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

FS
type: SiteQuality
SIO_000300: 3.527e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.040399918384003e-4
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

DP
type: SiteQuality
SIO_000300: 5.824893e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

VQSLOD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.901e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 5.56e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -8.728e0

QD
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BaseQRankSum
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FS
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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MQ
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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QD
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InbreedingCoeff
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DP
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQ
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FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.496251874062968e-5
allele num: 66700
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 1.213150551983501e-4
allele num: 16486
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MQ
type: SiteQuality
SIO_000300: 5.896e1

DP
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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SIO_000300: 3.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 926
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GenotypeQuality
all individuals: 233
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 2.2271714922049e-3
allele num: 898
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.183137525915688e-4
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 223
allele frequency: 2.275045908998164e-2
allele num: 9802
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998770504093322e-5
allele num: 66694
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.971e0

VQSLOD
type: SiteQuality
SIO_000300: 6.3e0

QD
type: SiteQuality
SIO_000300: 1.377e1

DP
type: SiteQuality
SIO_000300: 5.826196e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.373e0

MQ
type: SiteQuality
SIO_000300: 5.245e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 1.015e1

DP
type: SiteQuality
SIO_000300: 5.811812e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: -3.385e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.49e-1

DP
type: SiteQuality
SIO_000300: 5.802811e6

FS
type: SiteQuality
SIO_000300: 2.27e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.462e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.572e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 241
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GenotypeQuality
all individuals: 120
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6648
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.13034e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.87e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 1.431e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.549e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 779
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7786
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.29e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

DP
type: SiteQuality
SIO_000300: 4.42401e5

VQSLOD
type: SiteQuality
SIO_000300: -1.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 694
bin: 8.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 9.923447689254325e-4
allele num: 7054
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 2.560163850486431e-3
allele num: 7812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.56274e5

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.724e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.71e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.04e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 1
allele frequency: 1.279754287176862e-4
allele num: 7814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1752
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.81e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.866e0

QD
type: SiteQuality
SIO_000300: 9.98e0

DP
type: SiteQuality
SIO_000300: 4.67587e5

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

VQSLOD
type: SiteQuality
SIO_000300: -1.261e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-3
allele num: 864
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 11808
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 1.197318007662835e-4
allele num: 8352
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1502
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.393743257820927e-4
allele num: 1854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16032
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2568
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.067e0

DP
type: SiteQuality
SIO_000300: 6.65247e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.531e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.34e-2