1-16344239-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344239
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344239
    reference: chr 1
allele count: 2
allele frequency: 7.996161842315688e-5
allele num: 25012
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.*13G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.199+21G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.199+21G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.424+21G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.199+21G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.300G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.61+21G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.199+21G>C
  variant of: http://identifiers.org/hgnc/5249
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2228
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3086
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-16344248-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344248
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344248
    reference: chr 1
allele count: 1
allele frequency: 3.475601279021271e-5
allele num: 28772
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.291G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.199+12G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.199+12G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.424+12G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.199+12G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.61+12G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.199+12G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.*4G>C
  variant of: http://identifiers.org/hgnc/5249
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

1-16344248-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344248
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344248
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 28772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.199+12G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.*4G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.199+12G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.199+12G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.424+12G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.291G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.199+12G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.61+12G>A
  variant of: http://identifiers.org/hgnc/5249
canonical: false
consequence: 3' UTR
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11452
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-16344249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344249
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344249
    reference: chr 1
allele count: 1
allele frequency: 3.363153292527074e-5
allele num: 29734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.199+11C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.61+11C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.290C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.199+11C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.199+11C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.199+11C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.424+11C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31797
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

1-16344250-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344250
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344250
    reference: chr 1
allele count: 1
allele frequency: 3.244646333549643e-5
allele num: 30820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.199+10C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.*2C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.199+10C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.61+10C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.199+10C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.199+10C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.289C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.424+10C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4068
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32356
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/1-16344253-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344253
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344253
    reference: chr 1
allele count: 1
allele frequency: 3.058103975535168e-5
allele num: 32700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.199+7G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.199+7G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.206G>T
  hgvsp: ENSP00000445013.1:p.Ter69LeuextTer4
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.61+7G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.286G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.199+7G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.199+7G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.424+7G>T
  variant of: http://identifiers.org/hgnc/5249
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4498
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ter69LeuextTer4
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

1-16344253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344253
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344253
    reference: chr 1
allele count: 5
allele frequency: 1.529051987767584e-4
allele num: 32700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.199+7G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.199+7G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.424+7G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.286G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.199+7G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.61+7G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.199+7G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.206G>A
  hgvsp: ENST00000545268.1:c.206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35184
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 9.75e1
  variant carriers: 6
hgvs: c.199+7G>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-16344259-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344259
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344259
    reference: chr 1
allele count: 1
allele frequency: 2.727173557325188e-5
allele num: 36668
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.199+1G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.199+1G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.199+1G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.199+1G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.280G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.424+1G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.200G>C
  hgvsp: ENSP00000445013.1:p.Gly67Ala
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.61+1G>C
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
hgvs: c.199+1G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum

1-16344267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344267
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344267
    reference: chr 1
allele count: 2
allele frequency: 4.51426507764536e-5
allele num: 44304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.192C>T
  hgvsp: ENST00000545268.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.272C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.192C>T
  hgvsp: ENST00000487046.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.54C>T
  hgvsp: ENST00000463576.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.192C>T
  hgvsp: ENST00000311890.9:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.417C>T
  hgvsp: ENST00000375718.4:c.417C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.192C>T
  hgvsp: ENST00000411503.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.192C>T
  hgvsp: ENST00000406363.2:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8434
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ala64Ala
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

1-16344268-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344268
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344268
    reference: chr 1
allele count: 1
allele frequency: 2.214741318214033e-5
allele num: 45152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.191C>A
  hgvsp: ENSP00000385472.2:p.Ala64Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.53C>A
  hgvsp: ENSP00000417966.1:p.Ala18Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.191C>A
  hgvsp: ENSP00000419477.1:p.Ala64Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.191C>A
  hgvsp: ENSP00000445013.1:p.Ala64Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.191C>A
  hgvsp: ENSP00000391578.1:p.Ala64Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.271C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.191C>A
  hgvsp: ENSP00000310111.9:p.Ala64Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.416C>A
  hgvsp: ENSP00000364870.4:p.Ala139Asp
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala64Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

1-16344271-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344271
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344271
    reference: chr 1
allele count: 1
allele frequency: 2.045742809214026e-5
allele num: 48882
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.188T>C
  hgvsp: ENSP00000445013.1:p.Leu63Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.268T>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.188T>C
  hgvsp: ENSP00000385472.2:p.Leu63Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.50T>C
  hgvsp: ENSP00000417966.1:p.Leu17Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.188T>C
  hgvsp: ENSP00000310111.9:p.Leu63Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.188T>C
  hgvsp: ENSP00000419477.1:p.Leu63Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.413T>C
  hgvsp: ENSP00000364870.4:p.Leu138Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.188T>C
  hgvsp: ENSP00000391578.1:p.Leu63Pro
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2951
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu63Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

1-16344279-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344279
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344279
    reference: chr 1
allele count: 3
allele frequency: 5.219569907439627e-5
allele num: 57476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.180G>A
  hgvsp: ENST00000411503.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.180G>A
  hgvsp: ENST00000487046.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.42G>A
  hgvsp: ENST00000463576.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.180G>A
  hgvsp: ENST00000406363.2:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.180G>A
  hgvsp: ENST00000311890.9:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.260G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.405G>A
  hgvsp: ENST00000375718.4:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.180G>A
  hgvsp: ENST00000545268.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29180
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser60Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-16344282-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344282
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344282
    reference: chr 1
allele count: 1
allele frequency: 1.591089896579157e-5
allele num: 62850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.177C>A
  hgvsp: ENSP00000385472.2:p.His59Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.177C>A
  hgvsp: ENSP00000391578.1:p.His59Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.177C>A
  hgvsp: ENSP00000310111.9:p.His59Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.257C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.402C>A
  hgvsp: ENSP00000364870.4:p.His134Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.177C>A
  hgvsp: ENSP00000419477.1:p.His59Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.39C>A
  hgvsp: ENSP00000417966.1:p.His13Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.177C>A
  hgvsp: ENSP00000445013.1:p.His59Gln
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16429
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27351
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15964
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27427
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His59Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ

1-16344289-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344289
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344289
    reference: chr 1
allele count: 3
allele frequency: 4.144333314914074e-5
allele num: 72388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.170G>A
  hgvsp: ENSP00000385472.2:p.Arg57Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.32G>A
  hgvsp: ENSP00000417966.1:p.Arg11Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.170G>A
  hgvsp: ENSP00000310111.9:p.Arg57Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.170G>A
  hgvsp: ENSP00000445013.1:p.Arg57Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.170G>A
  hgvsp: ENSP00000391578.1:p.Arg57Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.170G>A
  hgvsp: ENSP00000419477.1:p.Arg57Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.250G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.395G>A
  hgvsp: ENSP00000364870.4:p.Arg132Gln
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20658
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg57Gln
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

1-16344290-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344290
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344290
    reference: chr 1
allele count: 6
allele frequency: 8.099133392726978e-5
allele num: 74082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.169C>T
  hgvsp: ENSP00000419477.1:p.Arg57Trp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.169C>T
  hgvsp: ENSP00000445013.1:p.Arg57Trp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.249C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.169C>T
  hgvsp: ENSP00000310111.9:p.Arg57Trp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.31C>T
  hgvsp: ENSP00000417966.1:p.Arg11Trp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.394C>T
  hgvsp: ENSP00000364870.4:p.Arg132Trp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.169C>T
  hgvsp: ENSP00000385472.2:p.Arg57Trp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.169C>T
  hgvsp: ENSP00000391578.1:p.Arg57Trp
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21275
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19816
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg57Trp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

1-16344290-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344290
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344290
    reference: chr 1
allele count: 2
allele frequency: 2.699711130908993e-5
allele num: 74082
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.169C>A
  hgvsp: ENST00000411503.1:c.169C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.394C>A
  hgvsp: ENST00000375718.4:c.394C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.169C>A
  hgvsp: ENST00000311890.9:c.169C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.169C>A
  hgvsp: ENST00000487046.1:c.169C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.249C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.169C>A
  hgvsp: ENST00000406363.2:c.169C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.169C>A
  hgvsp: ENST00000545268.1:c.169C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.31C>A
  hgvsp: ENST00000463576.1:c.31C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19816
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg57Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-16344307-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344307
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344307
    reference: chr 1
allele count: 117
allele frequency: 1.197568015721919e-3
allele num: 97698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.152A>G
  hgvsp: ENSP00000419477.1:p.Asp51Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.152A>G
  hgvsp: ENSP00000391578.1:p.Asp51Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.152A>G
  hgvsp: ENSP00000385472.2:p.Asp51Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.152A>G
  hgvsp: ENSP00000310111.9:p.Asp51Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.232A>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.14A>G
  hgvsp: ENSP00000417966.1:p.Asp5Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.377A>G
  hgvsp: ENSP00000364870.4:p.Asp126Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.152A>G
  hgvsp: ENSP00000445013.1:p.Asp51Gly
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 2.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11227
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 31672
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11670
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp51Gly
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-16344308-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344308
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344308
    reference: chr 1
allele count: 118
allele frequency: 1.201384646711464e-3
allele num: 98220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.151G>A
  hgvsp: ENSP00000385472.2:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.151G>A
  hgvsp: ENSP00000310111.9:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.151G>A
  hgvsp: ENSP00000391578.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.151G>A
  hgvsp: ENSP00000445013.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.376G>A
  hgvsp: ENSP00000364870.4:p.Asp126Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.151G>A
  hgvsp: ENSP00000419477.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.231G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.13G>A
  hgvsp: ENSP00000417966.1:p.Asp5Asn
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31632
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7097
  bin: 2.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp51Asn
num of homozygotes: 1
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

1-16344309-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344309
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344309
    reference: chr 1
allele count: 9
allele frequency: 9.097525473071325e-5
allele num: 98928
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.150T>C
  hgvsp: ENST00000406363.2:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.375T>C
  hgvsp: ENST00000375718.4:c.375T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.230T>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.150T>C
  hgvsp: ENST00000311890.9:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.150T>C
  hgvsp: ENST00000487046.1:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.12T>C
  hgvsp: ENST00000463576.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.150T>C
  hgvsp: ENST00000545268.1:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.150T>C
  hgvsp: ENST00000411503.1:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31942
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11082
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp50Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

1-16344311-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344311
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344311
    reference: chr 1
allele count: 1
allele frequency: 1.000280078421958e-5
allele num: 99972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.373G>A
  hgvsp: ENSP00000364870.4:p.Asp125Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.148G>A
  hgvsp: ENSP00000385472.2:p.Asp50Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.10G>A
  hgvsp: ENSP00000417966.1:p.Asp4Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.148G>A
  hgvsp: ENSP00000419477.1:p.Asp50Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.148G>A
  hgvsp: ENSP00000445013.1:p.Asp50Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.148G>A
  hgvsp: ENSP00000391578.1:p.Asp50Asn
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.228G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.148G>A
  hgvsp: ENSP00000310111.9:p.Asp50Asn
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp50Asn
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

1-16344312-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344312
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344312
    reference: chr 1
allele count: 1
allele frequency: 9.886698435924308e-6
allele num: 101146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.372C>T
  hgvsp: ENST00000375718.4:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.147C>T
  hgvsp: ENST00000406363.2:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.9C>T
  hgvsp: ENST00000463576.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.147C>T
  hgvsp: ENST00000411503.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.147C>T
  hgvsp: ENST00000311890.9:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.147C>T
  hgvsp: ENST00000545268.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.147C>T
  hgvsp: ENST00000487046.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.227C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser49Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

1-16344317-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344317
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344317
    reference: chr 1
allele count: 1
allele frequency: 9.638368416994371e-6
allele num: 103752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.142T>C
  hgvsp: ENSP00000391578.1:p.Phe48Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.222T>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.367T>C
  hgvsp: ENSP00000364870.4:p.Phe123Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.142T>C
  hgvsp: ENSP00000310111.9:p.Phe48Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.4T>C
  hgvsp: ENSP00000417966.1:p.Phe2Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.142T>C
  hgvsp: ENSP00000385472.2:p.Phe48Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.142T>C
  hgvsp: ENSP00000445013.1:p.Phe48Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.142T>C
  hgvsp: ENSP00000419477.1:p.Phe48Leu
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8744
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe48Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

1-16344320-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344320
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344320
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 104906
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.139A>G
  hgvsp: ENSP00000310111.9:p.Met47Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.139A>G
  hgvsp: ENSP00000419477.1:p.Met47Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.139A>G
  hgvsp: ENSP00000445013.1:p.Met47Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.219A>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000417966
  ensembl transcript: ENST00000463576
  gene symbol: HSPB7
  hgvsc: ENST00000463576.1:c.1A>G
  hgvsp: ENSP00000417966.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.139A>G
  hgvsp: ENSP00000385472.2:p.Met47Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.364A>G
  hgvsp: ENSP00000364870.4:p.Met122Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.139A>G
  hgvsp: ENSP00000391578.1:p.Met47Val
  variant of: http://identifiers.org/hgnc/5249
canonical: false
consequence: start lost
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-16344338-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344338
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344338
    reference: chr 1
allele count: 1
allele frequency: 8.975371580383428e-6
allele num: 111416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.121A>G
  hgvsp: ENSP00000419477.1:p.Met41Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.201A>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.346A>G
  hgvsp: ENSP00000364870.4:p.Met116Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.121A>G
  hgvsp: ENSP00000310111.9:p.Met41Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.121A>G
  hgvsp: ENSP00000445013.1:p.Met41Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.121A>G
  hgvsp: ENSP00000391578.1:p.Met41Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.121A>G
  hgvsp: ENSP00000385472.2:p.Met41Val
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34869
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5566
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met41Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-16344342-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344342
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344342
    reference: chr 1
allele count: 6
allele frequency: 5.347974900171136e-5
allele num: 112192
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.117G>C
  hgvsp: ENST00000487046.1:c.117G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.197G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.117G>C
  hgvsp: ENST00000406363.2:c.117G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.117G>C
  hgvsp: ENST00000545268.1:c.117G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.117G>C
  hgvsp: ENST00000411503.1:c.117G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.117G>C
  hgvsp: ENST00000311890.9:c.117G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.342G>C
  hgvsp: ENST00000375718.4:c.342G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5626
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro39Pro
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

1-16344342-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344342
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344342
    reference: chr 1
allele count: 3
allele frequency: 2.673987450085568e-5
allele num: 112192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.117G>A
  hgvsp: ENST00000545268.1:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.117G>A
  hgvsp: ENST00000411503.1:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.342G>A
  hgvsp: ENST00000375718.4:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.117G>A
  hgvsp: ENST00000406363.2:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.197G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.117G>A
  hgvsp: ENST00000311890.9:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.117G>A
  hgvsp: ENST00000487046.1:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34317
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10375
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34579
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4567
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro39Pro
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-16344343-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344343
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344343
    reference: chr 1
allele count: 6
allele frequency: 5.318866017765012e-5
allele num: 112806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.116C>T
  hgvsp: ENSP00000445013.1:p.Pro39Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.116C>T
  hgvsp: ENSP00000391578.1:p.Pro39Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.116C>T
  hgvsp: ENSP00000419477.1:p.Pro39Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.196C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.341C>T
  hgvsp: ENSP00000364870.4:p.Pro114Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.116C>T
  hgvsp: ENSP00000310111.9:p.Pro39Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.116C>T
  hgvsp: ENSP00000385472.2:p.Pro39Leu
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10482
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34384
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5762
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro39Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-16344353-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344353
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344353
    reference: chr 1
allele count: 6
allele frequency: 5.247507433968865e-5
allele num: 114340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.186G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.106G>T
  hgvsp: ENSP00000445013.1:p.Ala36Ser
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.106G>T
  hgvsp: ENSP00000310111.9:p.Ala36Ser
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-6G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.106G>T
  hgvsp: ENSP00000385472.2:p.Ala36Ser
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.106G>T
  hgvsp: ENSP00000391578.1:p.Ala36Ser
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.106G>T
  hgvsp: ENSP00000419477.1:p.Ala36Ser
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33489
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3521
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala36Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-16344354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344354
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344354
    reference: chr 1
allele count: 1
allele frequency: 8.743092956564315e-6
allele num: 114376
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.105G>A
  hgvsp: ENST00000311890.9:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.185G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-7G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.105G>A
  hgvsp: ENST00000411503.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.105G>A
  hgvsp: ENST00000406363.2:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.105G>A
  hgvsp: ENST00000545268.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.105G>A
  hgvsp: ENST00000487046.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12256
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3391
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
hgvs: c.337-7G>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

1-16344355-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344355
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344355
    reference: chr 1
allele count: 2
allele frequency: 1.744804843578246e-5
allele num: 114626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.184C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-8C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.104C>T
  hgvsp: ENSP00000385472.2:p.Pro35Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.104C>T
  hgvsp: ENSP00000419477.1:p.Pro35Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.104C>T
  hgvsp: ENSP00000445013.1:p.Pro35Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.104C>T
  hgvsp: ENSP00000310111.9:p.Pro35Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.104C>T
  hgvsp: ENSP00000391578.1:p.Pro35Leu
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32368
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32278
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3358
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2887
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro35Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-16344355-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344355
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344355
    reference: chr 1
allele count: 4
allele frequency: 3.489609687156491e-5
allele num: 114626
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.104C>G
  hgvsp: ENSP00000445013.1:p.Pro35Arg
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.104C>G
  hgvsp: ENSP00000419477.1:p.Pro35Arg
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.184C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-8C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.104C>G
  hgvsp: ENSP00000391578.1:p.Pro35Arg
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.104C>G
  hgvsp: ENSP00000385472.2:p.Pro35Arg
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.104C>G
  hgvsp: ENSP00000310111.9:p.Pro35Arg
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3358
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro35Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

1-16344360-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344360
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344360
    reference: chr 1
allele count: 70071
allele frequency: 5.89337078840687e-1
allele num: 118898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.99T>C
  hgvsp: ENST00000487046.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.99T>C
  hgvsp: ENST00000311890.9:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.179T>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.99T>C
  hgvsp: ENST00000545268.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.99T>C
  hgvsp: ENST00000406363.2:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-13T>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.99T>C
  hgvsp: ENST00000411503.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.25e1
  variant carriers: 455
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 521
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.25e1
  variant carriers: 714
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.5e0
  variant carriers: 356
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 4.25e1
  variant carriers: 5205
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 960
genotype depth: GenotypeDepth
  all individuals: 10968
  bin: 2.25e1
  variant carriers: 4838
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 8.25e1
  variant carriers: 580
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 2.75e1
  variant carriers: 7066
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 5.25e1
  variant carriers: 2421
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.75e1
  variant carriers: 661
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 4.75e1
  variant carriers: 3554
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 1.75e1
  variant carriers: 2411
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 874
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 5.75e1
  variant carriers: 1593
genotype depth: GenotypeDepth
  all individuals: 8578
  bin: 3.25e1
  variant carriers: 7578
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 3.75e1
  variant carriers: 6728
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 6.25e1
  variant carriers: 1185
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 9.75e1
  variant carriers: 1917
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.75e1
  variant carriers: 1235
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 6.75e1
  variant carriers: 1086
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 8.25e1
  variant carriers: 1413
genotype quality: GenotypeQuality
  all individuals: 39529
  bin: 9.75e1
  variant carriers: 39318
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 9.25e1
  variant carriers: 1257
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.5e0
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.5e0
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 4.25e1
  variant carriers: 286
hgvs: p.Ala33Ala
num of homozygotes: 21005
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-16344361-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344361
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344361
    reference: chr 1
allele count: 4
allele frequency: 3.354860353937767e-5
allele num: 119230
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.98C>A
  hgvsp: ENSP00000310111.9:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.98C>A
  hgvsp: ENSP00000419477.1:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-14C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.98C>A
  hgvsp: ENSP00000385472.2:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.98C>A
  hgvsp: ENSP00000445013.1:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.98C>A
  hgvsp: ENSP00000391578.1:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.178C>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11122
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8931
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17527
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Ala33Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-16344363-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344363
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344363
    reference: chr 1
allele count: 3
allele frequency: 2.515259239385606e-5
allele num: 119272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.96T>A
  hgvsp: ENST00000406363.2:c.96T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.96T>A
  hgvsp: ENST00000545268.1:c.96T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-16T>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.96T>A
  hgvsp: ENST00000411503.1:c.96T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.176T>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.96T>A
  hgvsp: ENST00000487046.1:c.96T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.96T>A
  hgvsp: ENST00000311890.9:c.96T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17523
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4017
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg32Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

1-16344365-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344365
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344365
    reference: chr 1
allele count: 1
allele frequency: 8.387572971884856e-6
allele num: 119224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.94C>T
  hgvsp: ENSP00000385472.2:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.94C>T
  hgvsp: ENSP00000419477.1:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.174C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.94C>T
  hgvsp: ENSP00000445013.1:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.94C>T
  hgvsp: ENSP00000391578.1:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.94C>T
  hgvsp: ENSP00000310111.9:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-18C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11027
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg32Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-16344365-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344365
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344365
    reference: chr 1
allele count: 3
allele frequency: 2.516271891565457e-5
allele num: 119224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.94C>A
  hgvsp: ENSP00000445013.1:p.Arg32Ser
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.174C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-18C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.94C>A
  hgvsp: ENSP00000391578.1:p.Arg32Ser
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.94C>A
  hgvsp: ENSP00000419477.1:p.Arg32Ser
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.94C>A
  hgvsp: ENSP00000310111.9:p.Arg32Ser
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.94C>A
  hgvsp: ENSP00000385472.2:p.Arg32Ser
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11027
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1951
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2844
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg32Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

1-16344367-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344367
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344367
    reference: chr 1
allele count: 1
allele frequency: 8.382370198997468e-6
allele num: 119298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.92C>T
  hgvsp: ENSP00000419477.1:p.Ser31Phe
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.92C>T
  hgvsp: ENSP00000310111.9:p.Ser31Phe
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.92C>T
  hgvsp: ENSP00000391578.1:p.Ser31Phe
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.172C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.92C>T
  hgvsp: ENSP00000445013.1:p.Ser31Phe
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.92C>T
  hgvsp: ENSP00000385472.2:p.Ser31Phe
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-20C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11005
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser31Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

1-16344370-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344370
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344370
    reference: chr 1
allele count: 3
allele frequency: 2.513868172753021e-5
allele num: 119338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.169C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.89C>G
  hgvsp: ENSP00000310111.9:p.Ala30Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.89C>G
  hgvsp: ENSP00000391578.1:p.Ala30Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.89C>G
  hgvsp: ENSP00000445013.1:p.Ala30Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.89C>G
  hgvsp: ENSP00000385472.2:p.Ala30Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.89C>G
  hgvsp: ENSP00000419477.1:p.Ala30Gly
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-23C>G
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala30Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-16344370-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344370
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344370
    reference: chr 1
allele count: 1
allele frequency: 8.379560575843403e-6
allele num: 119338
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.89C>A
  hgvsp: ENSP00000310111.9:p.Ala30Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.89C>A
  hgvsp: ENSP00000445013.1:p.Ala30Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-23C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.89C>A
  hgvsp: ENSP00000419477.1:p.Ala30Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.169C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.89C>A
  hgvsp: ENSP00000391578.1:p.Ala30Asp
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.89C>A
  hgvsp: ENSP00000385472.2:p.Ala30Asp
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14966
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala30Asp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

1-16344372-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344372
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344372
    reference: chr 1
allele count: 2
allele frequency: 1.675912115168681e-5
allele num: 119338
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.167G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-25G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.87G>C
  hgvsp: ENST00000406363.2:c.87G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.87G>C
  hgvsp: ENST00000487046.1:c.87G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.87G>C
  hgvsp: ENST00000411503.1:c.87G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.87G>C
  hgvsp: ENST00000311890.9:c.87G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.87G>C
  hgvsp: ENST00000545268.1:c.87G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2836
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser29Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

1-16344373-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344373
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344373
    reference: chr 1
allele count: 4
allele frequency: 3.349747094094396e-5
allele num: 119412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.86C>T
  hgvsp: ENSP00000391578.1:p.Ser29Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-26C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.86C>T
  hgvsp: ENSP00000310111.9:p.Ser29Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.166C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.86C>T
  hgvsp: ENSP00000385472.2:p.Ser29Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.86C>T
  hgvsp: ENSP00000419477.1:p.Ser29Leu
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.86C>T
  hgvsp: ENSP00000445013.1:p.Ser29Leu
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3564
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17539
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4052
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser29Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

1-16344380-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344380
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344380
    reference: chr 1
allele count: 4
allele frequency: 3.346160281077464e-5
allele num: 119540
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.79T>C
  hgvsp: ENSP00000419477.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.79T>C
  hgvsp: ENSP00000310111.9:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.79T>C
  hgvsp: ENSP00000385472.2:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.79T>C
  hgvsp: ENSP00000445013.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.79T>C
  hgvsp: ENSP00000391578.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-33T>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.159T>C
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4800
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16906
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3628
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser27Pro
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-16344381-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344381
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344381
    reference: chr 1
allele count: 3
allele frequency: 2.50970418953286e-5
allele num: 119536
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.158C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-34C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.78C>G
  hgvsp: ENST00000311890.9:c.78C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.78C>G
  hgvsp: ENST00000411503.1:c.78C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.78C>G
  hgvsp: ENST00000406363.2:c.78C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.78C>G
  hgvsp: ENST00000487046.1:c.78C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.78C>G
  hgvsp: ENST00000545268.1:c.78C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9040
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3634
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr26Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

1-16344383-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344383
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344383
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 119408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.76A>C
  hgvsp: ENSP00000391578.1:p.Thr26Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.156A>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.76A>C
  hgvsp: ENSP00000310111.9:p.Thr26Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.76A>C
  hgvsp: ENSP00000445013.1:p.Thr26Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.76A>C
  hgvsp: ENSP00000419477.1:p.Thr26Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.76A>C
  hgvsp: ENSP00000385472.2:p.Thr26Pro
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-36A>C
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12471
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr26Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum

1-16344391-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344391
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344391
    reference: chr 1
allele count: 5
allele frequency: 4.175504818532561e-5
allele num: 119746
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.68C>G
  hgvsp: ENSP00000391578.1:p.Ser23Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.148C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.68C>G
  hgvsp: ENSP00000385472.2:p.Ser23Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-44C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.68C>G
  hgvsp: ENSP00000310111.9:p.Ser23Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.68C>G
  hgvsp: ENSP00000419477.1:p.Ser23Cys
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.68C>G
  hgvsp: ENSP00000445013.1:p.Ser23Cys
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9266
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser23Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-16344393-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344393
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344393
    reference: chr 1
allele count: 1
allele frequency: 8.348778573694668e-6
allele num: 119778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.66C>T
  hgvsp: ENST00000406363.2:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.66C>T
  hgvsp: ENST00000311890.9:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-46C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.66C>T
  hgvsp: ENST00000545268.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.66C>T
  hgvsp: ENST00000487046.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.66C>T
  hgvsp: ENST00000411503.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.146C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17603
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser22Ser
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-16344396-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344396
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344396
    reference: chr 1
allele count: 1
allele frequency: 8.347802858287698e-6
allele num: 119792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.143C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.63C>T
  hgvsp: ENST00000411503.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.63C>T
  hgvsp: ENST00000406363.2:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.63C>T
  hgvsp: ENST00000487046.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.63C>T
  hgvsp: ENST00000545268.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-49C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.63C>T
  hgvsp: ENST00000311890.9:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3013
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17601
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser21Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-16344399-AGAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344399
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344396
    reference: chr 1
allele count: 1
allele frequency: 8.343763037129745e-6
allele num: 119850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.137_139delCTC
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.57_59delCTC
  hgvsp: ENSP00000419477.1:p.Ser25del
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.57_59delCTC
  hgvsp: ENSP00000310111.9:p.Ser25del
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.57_59delCTC
  hgvsp: ENSP00000445013.1:p.Ser25del
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.57_59delCTC
  hgvsp: ENSP00000385472.2:p.Ser25del
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.57_59delCTC
  hgvsp: ENSP00000391578.1:p.Ser25del
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-55_337-53delCTC
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3029
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser25del
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: AGAG
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

1-16344402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344402
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344402
    reference: chr 1
allele count: 70705
allele frequency: 5.884825382028831e-1
allele num: 120148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.57C>T
  hgvsp: ENST00000411503.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.57C>T
  hgvsp: ENST00000406363.2:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.137C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.57C>T
  hgvsp: ENST00000311890.9:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.57C>T
  hgvsp: ENST00000545268.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.57C>T
  hgvsp: ENST00000487046.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-55C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 8.25e1
  variant carriers: 1078
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 6.25e1
  variant carriers: 3224
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.25e1
  variant carriers: 606
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 5.25e1
  variant carriers: 4811
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.5e0
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 7.75e1
  variant carriers: 1388
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 420
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.75e1
  variant carriers: 5705
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 4.25e1
  variant carriers: 6177
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.75e1
  variant carriers: 734
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 8.75e1
  variant carriers: 792
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 6.75e1
  variant carriers: 2409
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 2.25e1
  variant carriers: 1499
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 5799
  bin: 4.75e1
  variant carriers: 5694
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.25e1
  variant carriers: 1844
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 5.75e1
  variant carriers: 4046
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 1779
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 2.75e1
  variant carriers: 2842
genotype depth: GenotypeDepth
  all individuals: 5597
  bin: 3.25e1
  variant carriers: 4514
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 8.75e1
  variant carriers: 399
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 6.75e1
  variant carriers: 355
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.75e1
  variant carriers: 169
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 89
hgvs: p.Ser19Ser
num of homozygotes: 21244
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-16344421-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344421
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344421
    reference: chr 1
allele count: 1
allele frequency: 8.357011532675915e-6
allele num: 119660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.38G>C
  hgvsp: ENSP00000385472.2:p.Arg13Thr
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.38G>C
  hgvsp: ENSP00000445013.1:p.Arg13Thr
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.38G>C
  hgvsp: ENSP00000391578.1:p.Arg13Thr
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.118G>C
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.38G>C
  hgvsp: ENSP00000419477.1:p.Arg13Thr
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.38G>C
  hgvsp: ENSP00000310111.9:p.Arg13Thr
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-74G>C
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3897
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18263
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg13Thr
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

1-16344426-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344426
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344426
    reference: chr 1
allele count: 36
allele frequency: 3.011695417203473e-4
allele num: 119534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.33G>A
  hgvsp: ENST00000411503.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.33G>A
  hgvsp: ENST00000311890.9:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.33G>A
  hgvsp: ENST00000487046.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.113G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.33G>A
  hgvsp: ENST00000406363.2:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.33G>A
  hgvsp: ENST00000545268.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-79G>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4180
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11110
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8633
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6232
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala11Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

1-16344427-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344427
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344427
    reference: chr 1
allele count: 3
allele frequency: 2.510250188268764e-5
allele num: 119510
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.32C>T
  hgvsp: ENSP00000310111.9:p.Ala11Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.32C>T
  hgvsp: ENSP00000419477.1:p.Ala11Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.32C>T
  hgvsp: ENSP00000385472.2:p.Ala11Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.32C>T
  hgvsp: ENSP00000391578.1:p.Ala11Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-80C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.32C>T
  hgvsp: ENSP00000445013.1:p.Ala11Val
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.112C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19060
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1743
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3886
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala11Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-16344430-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344430
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344430
    reference: chr 1
allele count: 1
allele frequency: 8.37058242512514e-6
allele num: 119466
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.29G>A
  hgvsp: ENSP00000310111.9:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.109G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-83G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.29G>A
  hgvsp: ENSP00000385472.2:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.29G>A
  hgvsp: ENSP00000391578.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.29G>A
  hgvsp: ENSP00000419477.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.29G>A
  hgvsp: ENSP00000445013.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg10Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

1-16344431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344431
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344431
    reference: chr 1
allele count: 1
allele frequency: 8.374507997655138e-6
allele num: 119410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.28C>T
  hgvsp: ENSP00000419477.1:p.Arg10Ter
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.28C>T
  hgvsp: ENSP00000391578.1:p.Arg10Ter
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.28C>T
  hgvsp: ENSP00000385472.2:p.Arg10Ter
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-84C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.28C>T
  hgvsp: ENSP00000310111.9:p.Arg10Ter
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.108C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.28C>T
  hgvsp: ENSP00000445013.1:p.Arg10Ter
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18044
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg10Ter
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

1-16344444-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344444
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344444
    reference: chr 1
allele count: 1
allele frequency: 8.393627557957998e-6
allele num: 119138
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.15C>T
  hgvsp: ENST00000311890.9:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.15C>T
  hgvsp: ENST00000487046.1:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.15C>T
  hgvsp: ENST00000406363.2:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.15C>T
  hgvsp: ENST00000545268.1:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-97C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.15C>T
  hgvsp: ENST00000411503.1:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.95C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2813
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr5Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

1-16344447-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344447
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344447
    reference: chr 1
allele count: 1
allele frequency: 8.400537634408602e-6
allele num: 119040
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.92A>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-100A>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.12A>G
  hgvsp: ENST00000545268.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.12A>G
  hgvsp: ENST00000406363.2:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.12A>G
  hgvsp: ENST00000311890.9:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.12A>G
  hgvsp: ENST00000487046.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.12A>G
  hgvsp: ENST00000411503.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19039
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg4Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-16344456-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344456
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344456
    reference: chr 1
allele count: 1
allele frequency: 8.452799567216662e-6
allele num: 118304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-109G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.3G>T
  hgvsp: ENSP00000419477.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.3G>T
  hgvsp: ENSP00000391578.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.3G>T
  hgvsp: ENSP00000385472.2:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.3G>T
  hgvsp: ENSP00000445013.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.3G>T
  hgvsp: ENSP00000310111.9:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.83G>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9452
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3800
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19037
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Met1?
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP

1-16344456-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344456
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344456
    reference: chr 1
allele count: 1
allele frequency: 8.452799567216662e-6
allele num: 118304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.3G>A
  hgvsp: ENSP00000391578.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.3G>A
  hgvsp: ENSP00000419477.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.3G>A
  hgvsp: ENSP00000385472.2:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.3G>A
  hgvsp: ENSP00000310111.9:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-109G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.3G>A
  hgvsp: ENSP00000445013.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.83G>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2804
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3800
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP

1-16344462-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344462
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344462
    reference: chr 1
allele count: 2
allele frequency: 1.710571330824495e-5
allele num: 116920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-115G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-4G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-4G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.77G>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2380
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5686
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15098
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

1-16344463-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344463
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344463
    reference: chr 1
allele count: 1
allele frequency: 8.548469823901522e-6
allele num: 116980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-5C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-5C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-5C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-116C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.76C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-5C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-5C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2800
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19031
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3754
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-16344466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344466
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344466
    reference: chr 1
allele count: 12169
allele frequency: 1.040921766205327e-1
allele num: 116906
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-8G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.73G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-8G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-119G>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 2.75e1
  variant carriers: 595
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 3.25e1
  variant carriers: 866
genotype depth: GenotypeDepth
  all individuals: 7166
  bin: 3.75e1
  variant carriers: 1168
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 1.25e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 6.75e1
  variant carriers: 579
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 1.75e1
  variant carriers: 291
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 7.25e1
  variant carriers: 449
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.75e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 4.75e1
  variant carriers: 1298
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 7.5e0
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 4.25e1
  variant carriers: 1346
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.75e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 5.75e1
  variant carriers: 985
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 9.75e1
  variant carriers: 288
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 2.25e1
  variant carriers: 392
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 8.25e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 5.25e1
  variant carriers: 1187
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 6.25e1
  variant carriers: 786
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 7.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 12433
  bin: 6.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 7.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 4866
  bin: 6.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 2303
  bin: 2.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 9.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.75e1
  variant carriers: 13
num of homozygotes: 930
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

1-16344467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344467
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344467
    reference: chr 1
allele count: 6
allele frequency: 5.147740142077628e-5
allele num: 116556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-9C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.72C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-9C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-120C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3488
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16696
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

1-16344469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344469
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344469
    reference: chr 1
allele count: 5
allele frequency: 4.297526343836488e-5
allele num: 116346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-122G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-11G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-11G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.70G>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9995
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16690
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2900
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP

1-16344470-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344470
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344470
    reference: chr 1
allele count: 257
allele frequency: 2.218232664123323e-3
allele num: 115858
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-12C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.69C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-12C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-12C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-12C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-12C>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-123C>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9921
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11233
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5419
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16108
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6092
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 8
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-16344472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344472
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344472
    reference: chr 1
allele count: 3
allele frequency: 2.588170336117054e-5
allele num: 115912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-14G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-14G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.67G>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-125G>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3441
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16525
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2898
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2570
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6125
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

1-16344473-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344473
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344473
    reference: chr 1
allele count: 21
allele frequency: 1.812063163344551e-4
allele num: 115890
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-15C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-15C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-15C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.66C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-15C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-15C>G
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-126C>G
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2992
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

1-16344475-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344475
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344475
    reference: chr 1
allele count: 1
allele frequency: 8.648424257100357e-6
allele num: 115628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.64C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-17C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-17C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-128C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-17C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-17C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-17C>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9785
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3825
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2752
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16598
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-16344479-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344479
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344479
    reference: chr 1
allele count: 1
allele frequency: 8.678446210990383e-6
allele num: 115228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-132A>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-21A>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-21A>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-21A>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-21A>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.60A>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-21A>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

1-16344480-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344480
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344480
    reference: chr 1
allele count: 2
allele frequency: 1.745992946188497e-5
allele num: 114548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-22C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-22C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-22C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-22C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-22C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-133C>A
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.59C>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9411
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

1-16344486-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344486
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344485
    reference: chr 1
allele count: 2
allele frequency: 1.758674662774133e-5
allele num: 113722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-29delG
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-29delG
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-140delG
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.52delG
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-29delG
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-29delG
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-29delG
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12684
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2885
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3372
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: GC
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-16344491-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344491
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344491
    reference: chr 1
allele count: 3
allele frequency: 2.643917227764656e-5
allele num: 113468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000385472
  ensembl transcript: ENST00000406363
  gene symbol: HSPB7
  hgvsc: ENST00000406363.2:c.-33G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000419477
  ensembl transcript: ENST00000487046
  gene symbol: HSPB7
  hgvsc: ENST00000487046.1:c.-33G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000364870
  ensembl transcript: ENST00000375718
  gene symbol: HSPB7
  hgvsc: ENST00000375718.4:c.337-144G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000391578
  ensembl transcript: ENST00000411503
  gene symbol: HSPB7
  hgvsc: ENST00000411503.1:c.-33G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000445013
  ensembl transcript: ENST00000545268
  gene symbol: HSPB7
  hgvsc: ENST00000545268.1:c.-33G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173641
  ensembl protein: ENSP00000310111
  ensembl transcript: ENST00000311890
  gene symbol: HSPB7
  hgvsc: ENST00000311890.9:c.-33G>T
  variant of: http://identifiers.org/hgnc/5249
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.48G>T
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7999
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1627
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12571
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4736
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum

1-16344491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 16344491
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 16344491
    reference: chr 1
allele count: 1
allele frequency: 8.813057425882187e-6
allele num: 113468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173641
  ensembl transcript: ENST00000442459
  gene symbol: HSPB7
  hgvsc: ENST00000442459.2:n.48G>A
  variant of: http://identifiers.org/hgnc/5249
canonical: true
consequence: 5' UTR
filter: PASS
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 2408
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.444390124663896e-4
allele num: 8182
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.568e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.47e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
type: SiteQuality
SIO_000300: 7.007e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

DP
type: SiteQuality
SIO_000300: 5.99207e5

QD
type: SiteQuality
SIO_000300: 2.422e1

GenotypeQuality
all individuals: 409
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13628
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1182
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.839945280437756e-4
allele num: 1462
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.387e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

FS
type: SiteQuality
SIO_000300: 3.182e0

DP
type: SiteQuality
SIO_000300: 6.57687e5

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

FS
type: SiteQuality
SIO_000300: 3.182e0

DP
type: SiteQuality
SIO_000300: 6.57687e5

QD
type: SiteQuality
SIO_000300: 7.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.387e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.032348804500703e-5
allele num: 14220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.35e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQ
type: SiteQuality
SIO_000300: 5.682e1

VQSLOD
type: SiteQuality
SIO_000300: -9.681e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

DP
type: SiteQuality
SIO_000300: 6.68382e5

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 678
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14892
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.885170225043277e-4
allele num: 3466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 6.76003e5

VQSLOD
type: SiteQuality
SIO_000300: -8.359999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.404e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.090000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.152073732718894e-4
allele num: 8680
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

FS
type: SiteQuality
SIO_000300: 3.381e0

VQSLOD
type: SiteQuality
SIO_000300: 9.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.21e1

DP
type: SiteQuality
SIO_000300: 6.95646e5

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.273525721455458e-4
allele num: 1594
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8680
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.494698765124111e-4
allele num: 16034
num of homozygotes: 0

East Asian
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allele count: 0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.21e1

MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 6.95646e5

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.394907207596029e-5
allele num: 18536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2112
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2004
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8956
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 284
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

DP
type: SiteQuality
SIO_000300: 7.33194e5

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.808e0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 7.022471910112359e-4
allele num: 2848
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 23226
num of homozygotes: 0

South Asian
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allele num: 9496
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VQSLOD
type: SiteQuality
SIO_000300: -3.207e-1

MQ
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.319e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

DP
type: SiteQuality
SIO_000300: 7.93655e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23778
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.049317943336831e-4
allele num: 9530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2794
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.42e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

DP
type: SiteQuality
SIO_000300: 8.00224e5

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

GenotypeQuality
all individuals: 1933
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.194888178913738e-4
allele num: 3130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26042
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4630
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1560
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.32256e5

QD
type: SiteQuality
SIO_000300: 4.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.568e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.766e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.38e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.395906619763352e-5
allele num: 31270
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.908396946564885e-4
allele num: 5240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10434
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

DP
type: SiteQuality
SIO_000300: 8.99333e5

MQ
type: SiteQuality
SIO_000300: 5.919e1

QD
type: SiteQuality
SIO_000300: 1.386e1

VQSLOD
type: SiteQuality
SIO_000300: -9.524e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

FS
type: SiteQuality
SIO_000300: 1.3508e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.0e-4
allele num: 5000
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2228
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.077e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.508e0

QD
type: SiteQuality
SIO_000300: 1.02e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.40979e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2702
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.597954618088846e-4
allele num: 6258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.974381933044819e-5
allele num: 40206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6240
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

FS
type: SiteQuality
SIO_000300: 2.889e0

DP
type: SiteQuality
SIO_000300: 1.020297e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.524e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.971608832807571e-4
allele num: 5072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.285797551972023e-5
allele num: 41176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2802
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.721170395869191e-4
allele num: 11620
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 554
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QD
type: SiteQuality
SIO_000300: 6.24e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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DP
type: SiteQuality
SIO_000300: 1.045281e6

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 1.566416040100251e-4
allele num: 6384
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East Asian
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.428599183990674e-5
allele num: 41176
num of homozygotes: 0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4186
num of homozygotes: 0

East Asian
type: Population
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African
type: Population
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allele frequency: 1.295210166177908e-2
allele num: 8184
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Latino
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allele count: 9
allele frequency: 9.487666034155598e-4
allele num: 9486
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South Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 1
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allele num: 688
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.834660404359153e-5
allele num: 54506
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DP
type: SiteQuality
SIO_000300: 1.245152e6

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11374
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African
type: Population
allele count: 107
allele frequency: 1.299489919844547e-2
allele num: 8234
num of homozygotes: 1

Latino
type: Population
allele count: 9
allele frequency: 9.437919463087249e-4
allele num: 9536
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.826283877565929e-5
allele num: 54756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 1
allele frequency: 1.424501424501425e-3
allele num: 702
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.479e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 5.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

QD
type: SiteQuality
SIO_000300: 1.697e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 1.251873e6

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 9.75e1
variant carriers: 9

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7080
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.631735441293785e-4
allele num: 55156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4274
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 5.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.326e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.32e1

DP
type: SiteQuality
SIO_000300: 1.257147e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.795396603109627e-5
allele num: 55698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.270445e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.8e-1

QD
type: SiteQuality
SIO_000300: 3.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.865e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.933e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.473e0

GenotypeQuality
all individuals: 416
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.774811869941786e-5
allele num: 56344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14098
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e-1

FS
type: SiteQuality
SIO_000300: 5.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.327e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

DP
type: SiteQuality
SIO_000300: 1.281601e6

GenotypeQuality
all individuals: 691
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1008
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variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.944444444444444e-5
allele num: 14400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7462
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.30591e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 1.974e0

QD
type: SiteQuality
SIO_000300: 1.46e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 636
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.318771e6

VQSLOD
type: SiteQuality
SIO_000300: 7.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

FS
type: SiteQuality
SIO_000300: 1.199e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

QD
type: SiteQuality
SIO_000300: 1.502e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 811
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.619170984455958e-5
allele num: 61760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10832
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.402e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

DP
type: SiteQuality
SIO_000300: 1.397448e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15430
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.061796559779146e-4
allele num: 9418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.042722944280015e-5
allele num: 62168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5350
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.822e0

MQ
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.217089177712006e-5
allele num: 62168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.061796559779146e-4
allele num: 9418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5350
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.822e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.222e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

DP
type: SiteQuality
SIO_000300: 1.41278e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2333
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variant carriers: 6

GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.603380389897244e-5
allele num: 62478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10938
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.47e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

DP
type: SiteQuality
SIO_000300: 1.41878e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1334
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1802
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2356
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2318
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5594
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.81000762001524e-4
allele num: 15748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11086
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

FS
type: SiteQuality
SIO_000300: 4.046e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.082e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

DP
type: SiteQuality
SIO_000300: 1.449493e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeQuality
all individuals: 716
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2363
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variant carriers: 1

GenotypeQuality
all individuals: 1830
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.205400192864031e-4
allele num: 8296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.297e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.44e-1

DP
type: SiteQuality
SIO_000300: 1.456559e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.798e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.26e-1

QD
type: SiteQuality
SIO_000300: 1.688e1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 668
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variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.158459934935725e-5
allele num: 63322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.429e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

QD
type: SiteQuality
SIO_000300: 1.399e1

DP
type: SiteQuality
SIO_000300: 1.462019e6

GenotypeQuality
all individuals: 1420
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 877
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32278
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2368
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.210653753026634e-3
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15788
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.611846857693234e-4
allele num: 8306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 2.429e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

QD
type: SiteQuality
SIO_000300: 1.399e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

DP
type: SiteQuality
SIO_000300: 1.462019e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

GenotypeQuality
all individuals: 174
bin: 1.75e1
variant carriers: 143

GenotypeQuality
all individuals: 559
bin: 5.75e1
variant carriers: 470

GenotypeQuality
all individuals: 243
bin: 2.75e1
variant carriers: 140

GenotypeQuality
all individuals: 775
bin: 5.25e1
variant carriers: 616

GenotypeQuality
all individuals: 980
bin: 7.25e1
variant carriers: 682

GenotypeQuality
all individuals: 595
bin: 2.25e1
variant carriers: 162

GenotypeQuality
all individuals: 623
bin: 4.75e1
variant carriers: 469

GenotypeQuality
all individuals: 373
bin: 3.25e1
variant carriers: 252

GenotypeQuality
all individuals: 8073
bin: 6.25e1
variant carriers: 892

GenotypeQuality
all individuals: 859
bin: 8.75e1
variant carriers: 761

GenotypeQuality
all individuals: 425
bin: 3.75e1
variant carriers: 302

European (Finnish)
type: Population
allele count: 3656
allele frequency: 5.836526181353767e-1
allele num: 6264
num of homozygotes: 1046

Other
type: Population
allele count: 519
allele frequency: 5.97926267281106e-1
allele num: 868
num of homozygotes: 167

East Asian
type: Population
allele count: 6341
allele frequency: 7.400793650793651e-1
allele num: 8568
num of homozygotes: 2352

European (Non-Finnish)
type: Population
allele count: 38560
allele frequency: 5.903064817366278e-1
allele num: 65322
num of homozygotes: 11291

Latino
type: Population
allele count: 4266
allele frequency: 3.767885532591415e-1
allele num: 11322
num of homozygotes: 810

African
type: Population
allele count: 7011
allele frequency: 6.904668111089226e-1
allele num: 10154
num of homozygotes: 2417

South Asian
type: Population
allele count: 9718
allele frequency: 5.925609756097561e-1
allele num: 16400
num of homozygotes: 2922

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

FS
type: SiteQuality
SIO_000300: 1.112e0

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 2.227e1

DP
type: SiteQuality
SIO_000300: 2.30781e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.79e-2

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

GenotypeQuality
all individuals: 2811
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13882
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variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
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variant carriers: 0

GenotypeQuality
all individuals: 565
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variant carriers: 0

GenotypeQuality
all individuals: 147
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variant carriers: 0

GenotypeQuality
all individuals: 656
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variant carriers: 0

GenotypeQuality
all individuals: 5503
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variant carriers: 0

GenotypeQuality
all individuals: 2846
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.43516376476318e-4
allele num: 16426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.395e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

VQSLOD
type: SiteQuality
SIO_000300: -3.044e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.5e-2

QD
type: SiteQuality
SIO_000300: 1.871e1

DP
type: SiteQuality
SIO_000300: 2.112539e6

GenotypeQuality
all individuals: 14385
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.25e1
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GenotypeQuality
all individuals: 2848
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.580852038479157e-5
allele num: 65490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

FS
type: SiteQuality
SIO_000300: 3.258e0

DP
type: SiteQuality
SIO_000300: 2.112299e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

QD
type: SiteQuality
SIO_000300: 1.409e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5394
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variant carriers: 0

GenotypeQuality
all individuals: 2844
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variant carriers: 0

GenotypeQuality
all individuals: 3974
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GenotypeQuality
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GenotypeQuality
all individuals: 1140
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variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
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variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17518
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.086427267194157e-5
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65448
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.238e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

MQ
type: SiteQuality
SIO_000300: 5.935e1

DP
type: SiteQuality
SIO_000300: 2.111814e6

MQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.613e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

GenotypeQuality
all individuals: 969
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
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GenotypeQuality
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GenotypeQuality
all individuals: 1676
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GenotypeQuality
all individuals: 3507
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17518
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5394
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3974
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.956247536460386e-4
allele num: 10148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

FS
type: SiteQuality
SIO_000300: 1.238e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.613e0

DP
type: SiteQuality
SIO_000300: 2.111814e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
all individuals: 1136
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17520
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5366
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4008
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65492
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.1441647597254e-3
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.111071e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

FS
type: SiteQuality
SIO_000300: 2.086e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.95e-1

QD
type: SiteQuality
SIO_000300: 1.151e1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.307e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-1

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4016
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5386
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3521
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17523
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 3
allele frequency: 2.952755905511811e-4
allele num: 10160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.19e-1

QD
type: SiteQuality
SIO_000300: 1.358e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

DP
type: SiteQuality
SIO_000300: 2.113452e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.128e0

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4016
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3521
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5386
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17523
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65522
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.358e1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 2.113452e6

MQ
type: SiteQuality
SIO_000300: 5.913e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.128e0

FS
type: SiteQuality
SIO_000300: 5.19e-1

GenotypeQuality
all individuals: 200
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17527
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15454
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.744316194473592e-5
allele num: 11436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526577718071627e-5
allele num: 65506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.128e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

DP
type: SiteQuality
SIO_000300: 2.11685e6

FS
type: SiteQuality
SIO_000300: 3.177e0

QD
type: SiteQuality
SIO_000300: 1.438e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e-1

GenotypeQuality
all individuals: 1188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2869
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5489
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.83671060397403e-5
allele num: 10166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.576379778503218e-5
allele num: 65554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.119429e6

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.82e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 2.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

FS
type: SiteQuality
SIO_000300: 2.526e0

MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

GenotypeQuality
all individuals: 17546
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4125
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2927
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5683
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65610
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.649000464900046e-4
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 2.127929e6

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

VQSLOD
type: SiteQuality
SIO_000300: 6.08e-1

FS
type: SiteQuality
SIO_000300: 1.235e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

QD
type: SiteQuality
SIO_000300: 2.203e1

GenotypeQuality
all individuals: 4143
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
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variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17545
bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.573031310021036e-5
allele num: 65602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.546e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.129042e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.5e-1

QD
type: SiteQuality
SIO_000300: 1.15e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.304e0

GenotypeQuality
all individuals: 1990
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2870
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 5534
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variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17529
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16604
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3628
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2879
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

FS
type: SiteQuality
SIO_000300: 1.1429e1

DP
type: SiteQuality
SIO_000300: 2.132556e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.569e0

VQSLOD
type: SiteQuality
SIO_000300: -1.792e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 5.04e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5864
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17593
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 17272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2937
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.60872873360319e-5
allele num: 65714
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.32e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 2.452e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

DP
type: SiteQuality
SIO_000300: 2.142478e6

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2944
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17596
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3019
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.797e0

QD
type: SiteQuality
SIO_000300: 6.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

DP
type: SiteQuality
SIO_000300: 2.144467e6

FS
type: SiteQuality
SIO_000300: 1.379e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.969e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e-1

GenotypeQuality
all individuals: 471
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 3752
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.792401096748923e-5
allele num: 10212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.173e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.26e-1

DP
type: SiteQuality
SIO_000300: 2.1473e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.46e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520357588104722e-5
allele num: 65774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.150432e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

MQ
type: SiteQuality
SIO_000300: 5.672e1

QD
type: SiteQuality
SIO_000300: 1.586e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 9.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e0

GenotypeQuality
all individuals: 669
bin: 7.25e1
variant carriers: 307

GenotypeQuality
all individuals: 895
bin: 9.25e1
variant carriers: 769

GenotypeQuality
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variant carriers: 45348

GenotypeQuality
all individuals: 290
bin: 2.25e1
variant carriers: 69

GenotypeQuality
all individuals: 183
bin: 3.75e1
variant carriers: 133

GenotypeQuality
all individuals: 171
bin: 3.25e1
variant carriers: 126

GenotypeQuality
all individuals: 848
bin: 8.25e1
variant carriers: 614

GenotypeQuality
all individuals: 82
bin: 1.75e1
variant carriers: 62

GenotypeQuality
all individuals: 310
bin: 5.25e1
variant carriers: 240

GenotypeQuality
all individuals: 7854
bin: 6.25e1
variant carriers: 283

GenotypeQuality
all individuals: 919
bin: 7.75e1
variant carriers: 505

European (Non-Finnish)
type: Population
allele count: 38895
allele frequency: 5.899796741801414e-1
allele num: 65926
num of homozygotes: 11419

Latino
type: Population
allele count: 4310
allele frequency: 3.758283920474363e-1
allele num: 11468
num of homozygotes: 827

Other
type: Population
allele count: 532
allele frequency: 5.97752808988764e-1
allele num: 890
num of homozygotes: 172

European (Finnish)
type: Population
allele count: 3738
allele frequency: 5.779220779220779e-1
allele num: 6468
num of homozygotes: 1069

African
type: Population
allele count: 7107
allele frequency: 6.895982922569377e-1
allele num: 10306
num of homozygotes: 2456

South Asian
type: Population
allele count: 9742
allele frequency: 5.907822922983627e-1
allele num: 16490
num of homozygotes: 2928

East Asian
type: Population
allele count: 6381
allele frequency: 7.419767441860465e-1
allele num: 8600
num of homozygotes: 2373

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.644e0

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

FS
type: SiteQuality
SIO_000300: 2.499e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

DP
type: SiteQuality
SIO_000300: 2.781071e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-2

QD
type: SiteQuality
SIO_000300: 2.258e1

GenotypeQuality
all individuals: 3512
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 191
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variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19083
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

QD
type: SiteQuality
SIO_000300: 2.387e1

FS
type: SiteQuality
SIO_000300: 1.183e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.5e-2

DP
type: SiteQuality
SIO_000300: 2.311646e6

VQSLOD
type: SiteQuality
SIO_000300: -2.744e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.856e0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
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variant carriers: 0

GenotypeQuality
all individuals: 1740
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variant carriers: 1

GenotypeQuality
all individuals: 18288
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3881
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GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 19090
bin: 9.75e1
variant carriers: 36

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.222045704509349e-4
allele num: 65464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.8405825624877e-5
allele num: 10162
num of homozygotes: 0

South Asian
type: Population
allele count: 27
allele frequency: 1.637157409653165e-3
allele num: 16492
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

DP
type: SiteQuality
SIO_000300: 2.310159e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 5.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

QD
type: SiteQuality
SIO_000300: 1.237e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.17e-1

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1362
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variant carriers: 0

GenotypeQuality
all individuals: 123
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
all individuals: 2682
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variant carriers: 0

GenotypeQuality
all individuals: 6230
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.645401052957572e-4
allele num: 6458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.308739e6

QD
type: SiteQuality
SIO_000300: 1.18e1

VQSLOD
type: SiteQuality
SIO_000300: 4.97e-1

MQ
type: SiteQuality
SIO_000300: 5.912e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 2.794e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65420
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

FS
type: SiteQuality
SIO_000300: 3.008e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

QD
type: SiteQuality
SIO_000300: 1.964e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.344e0

DP
type: SiteQuality
SIO_000300: 2.306533e6

VQSLOD
type: SiteQuality
SIO_000300: -1.242e0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 82
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19051
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65382
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.867771857114664e-5
allele num: 10134
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

MQ
type: SiteQuality
SIO_000300: 5.88e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 2.305143e6

QD
type: SiteQuality
SIO_000300: 1.543e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.514e0

FS
type: SiteQuality
SIO_000300: 7.221e0

VQSLOD
type: SiteQuality
SIO_000300: -1.418e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.028e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6136
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GenotypeQuality
all individuals: 83
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GenotypeQuality
all individuals: 306
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GenotypeQuality
all individuals: 72
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GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534118802160039e-5
allele num: 65184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.929e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

QD
type: SiteQuality
SIO_000300: 1.003e1

VQSLOD
type: SiteQuality
SIO_000300: -1.366e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.026e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

DP
type: SiteQuality
SIO_000300: 2.296318e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeQuality
all individuals: 1738
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17557
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535579374097847e-5
allele num: 65122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

QD
type: SiteQuality
SIO_000300: 1.285e1

DP
type: SiteQuality
SIO_000300: 2.29295e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

FS
type: SiteQuality
SIO_000300: 5.876e0

VQSLOD
type: SiteQuality
SIO_000300: 4.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.32e-1

GenotypeQuality
all individuals: 491
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2804
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1738
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64636
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16795141322121e-4
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.662e0

QD
type: SiteQuality
SIO_000300: 1.112e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 1.508e0

VQSLOD
type: SiteQuality
SIO_000300: -1.42e-2

MQ
type: SiteQuality
SIO_000300: 5.901e1

DP
type: SiteQuality
SIO_000300: 2.273722e6

GenotypeQuality
all individuals: 1738
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5942
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variant carriers: 0

GenotypeQuality
all individuals: 3447
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.009081735620585e-4
allele num: 9910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

QD
type: SiteQuality
SIO_000300: 1.112e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.42e-2

MQ
type: SiteQuality
SIO_000300: 5.901e1

FS
type: SiteQuality
SIO_000300: 1.508e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.662e0

DP
type: SiteQuality
SIO_000300: 2.273722e6

GenotypeQuality
all individuals: 318
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2548
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variant carriers: 0

GenotypeQuality
all individuals: 1738
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.044713748432929e-4
allele num: 9572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570647735125966e-5
allele num: 63668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

FS
type: SiteQuality
SIO_000300: 3.959e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

VQSLOD
type: SiteQuality
SIO_000300: -8.316e-1

QD
type: SiteQuality
SIO_000300: 1.027e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e-1

DP
type: SiteQuality
SIO_000300: 2.256061e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-1

GenotypeQuality
all individuals: 817
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
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variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15259
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569760140650509e-5
allele num: 63704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.082e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.177e0

FS
type: SiteQuality
SIO_000300: 6.268e0

MQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 2.25531e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 8.210000000000001e0

GenotypeQuality
all individuals: 564
bin: 3.25e1
variant carriers: 18

GenotypeQuality
all individuals: 196
bin: 5.75e1
variant carriers: 20

GenotypeQuality
all individuals: 136
bin: 1.25e1
variant carriers: 9

GenotypeQuality
all individuals: 3190
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variant carriers: 46

GenotypeQuality
all individuals: 126
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variant carriers: 4

GenotypeQuality
all individuals: 1449
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variant carriers: 43

GenotypeQuality
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variant carriers: 27

GenotypeQuality
all individuals: 2948
bin: 8.25e1
variant carriers: 51

GenotypeQuality
all individuals: 142
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variant carriers: 24

GenotypeQuality
all individuals: 25493
bin: 9.75e1
variant carriers: 10905

East Asian
type: Population
allele count: 1976
allele frequency: 2.317616701853155e-1
allele num: 8526
num of homozygotes: 238

European (Non-Finnish)
type: Population
allele count: 5715
allele frequency: 8.972869434151856e-2
allele num: 63692
num of homozygotes: 274

African
type: Population
allele count: 316
allele frequency: 3.306130989746809e-2
allele num: 9558
num of homozygotes: 9

South Asian
type: Population
allele count: 617
allele frequency: 3.751215953307393e-2
allele num: 16448
num of homozygotes: 24

European (Finnish)
type: Population
allele count: 1052
allele frequency: 1.648386085866499e-1
allele num: 6382
num of homozygotes: 91

Latino
type: Population
allele count: 2392
allele frequency: 2.093837535014006e-1
allele num: 11424
num of homozygotes: 285

Other
type: Population
allele count: 101
allele frequency: 1.15296803652968e-1
allele num: 876
num of homozygotes: 9

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.89e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 2.383879e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

FS
type: SiteQuality
SIO_000300: 1.841e0

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
all individuals: 3842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
all individuals: 6273
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.879227205395695e-5
allele num: 63458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9564
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.353e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

DP
type: SiteQuality
SIO_000300: 2.201042e6

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

QD
type: SiteQuality
SIO_000300: 1.128e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 185
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variant carriers: 0

GenotypeQuality
all individuals: 2608
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.579279848389135e-5
allele num: 63320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.19639110365086e-4
allele num: 9532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.309e1

VQSLOD
type: SiteQuality
SIO_000300: -3.171e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

FS
type: SiteQuality
SIO_000300: 1.0459e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.73e-1

DP
type: SiteQuality
SIO_000300: 2.19646e6

GenotypeQuality
all individuals: 2746
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 359
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GenotypeQuality
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variant carriers: 248

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3435
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variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.52411187656751e-5
allele num: 62998
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.796622097114708e-4
allele num: 11368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

African
type: Population
allele count: 241
allele frequency: 2.564375399021068e-2
allele num: 9398
num of homozygotes: 8

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.49e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.06e0

FS
type: SiteQuality
SIO_000300: 5.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

DP
type: SiteQuality
SIO_000300: 2.192032e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.72e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

GenotypeQuality
all individuals: 1102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16611
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1659
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GenotypeQuality
all individuals: 756
bin: 3.25e1
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GenotypeQuality
all individuals: 179
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GenotypeQuality
all individuals: 2757
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GenotypeQuality
all individuals: 186
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GenotypeQuality
all individuals: 3803
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variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.759034233319585e-5
allele num: 63038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 3.852e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

DP
type: SiteQuality
SIO_000300: 2.187985e6

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.137e0

QD
type: SiteQuality
SIO_000300: 1.209e1

GenotypeQuality
all individuals: 2752
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6092
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16808
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16619
bin: 9.75e1
variant carriers: 21

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.331429659242337e-4
allele num: 63036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.15e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 2.187634e6

VQSLOD
type: SiteQuality
SIO_000300: 4.73e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.501e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

QD
type: SiteQuality
SIO_000300: 1.235e1

GenotypeQuality
all individuals: 2968
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1642
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590634344976777e-5
allele num: 62868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.926e0

MQ
type: SiteQuality
SIO_000300: 5.871e1

FS
type: SiteQuality
SIO_000300: 1.475e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.88e0

DP
type: SiteQuality
SIO_000300: 2.179716e6

QD
type: SiteQuality
SIO_000300: 2.53e1

GenotypeQuality
all individuals: 121
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2933
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16591
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15893
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0960741282614e-5
allele num: 16404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62636
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.523e0

DP
type: SiteQuality
SIO_000300: 2.170863e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.048e0

MQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

GenotypeQuality
all individuals: 557
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3633
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5487
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16588
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1637
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.213574137155344e-5
allele num: 62236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.377e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.93e-1

DP
type: SiteQuality
SIO_000300: 2.156297e6

VQSLOD
type: SiteQuality
SIO_000300: 9.27e-1

QD
type: SiteQuality
SIO_000300: 1.127e1

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.125e0

GenotypeQuality
all individuals: 855
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16586
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2315
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6168
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.791793585378964e-4
allele num: 11162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.517e0

MQ
type: SiteQuality
SIO_000300: 6.065e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.042e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 1.848e1

DP
type: SiteQuality
SIO_000300: 2.132971e6

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

GenotypeQuality
all individuals: 3532
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.868391159001655e-5
allele num: 61622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.418e1

MQRankSum
type: SiteQuality
SIO_000300: -7.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.017e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-2

DP
type: SiteQuality
SIO_000300: 2.122307e6

MQ
type: SiteQuality
SIO_000300: 5.899e1

FS
type: SiteQuality
SIO_000300: 1.5678e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1