1-144931657-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931657
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931657
    reference: chr 1
allele count: 1
allele frequency: 8.269793751343841e-6
allele num: 120922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7836C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7836C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.52C>T
  hgvsp: ENSP00000433392.1:p.Arg18Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7836C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7836C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+678C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.52C>T
  hgvsp: ENSP00000316434.9:p.Arg18Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7836C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7836C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7836C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9637C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg18Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP

1-144931659-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931659
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931659
    reference: chr 1
allele count: 1
allele frequency: 8.271709100534353e-6
allele num: 120894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7838G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7838G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7838G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.50G>C
  hgvsp: ENSP00000316434.9:p.Arg17Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.50G>C
  hgvsp: ENSP00000433392.1:p.Arg17Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7838G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+676G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7838G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9639G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7838G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7838G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg17Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

1-144931660-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931660
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931660
    reference: chr 1
allele count: 2
allele frequency: 1.654451301225948e-5
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7839C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9640C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7839C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7839C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.49C>A
  hgvsp: ENST00000313431.9:c.49C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7839C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.49C>A
  hgvsp: ENST00000529945.1:c.49C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7839C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+675C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7839C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7839C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg17Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

1-144931664-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931664
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931664
    reference: chr 1
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7843C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7843C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7843C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.45C>T
  hgvsp: ENST00000313431.9:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.45C>T
  hgvsp: ENST00000529945.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9644C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7843C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7843C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7843C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+671C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7843C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8213
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn15Asn
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD

1-144931666-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931666
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931666
    reference: chr 1
allele count: 12
allele frequency: 9.934268258357203e-5
allele num: 120794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.43A>G
  hgvsp: ENSP00000433392.1:p.Asn15Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7845A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.43A>G
  hgvsp: ENSP00000316434.9:p.Asn15Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7845A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7845A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9646A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7845A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7845A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7845A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+669A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7845A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn15Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

1-144931669-CACACAGCTCTCGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931669
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931656
    reference: chr 1
allele count: 1
allele frequency: 8.283768783445716e-6
allele num: 120718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsp: ENSP00000433392.1:p.Arg10GlufsTer208
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsp: ENSP00000316434.9:p.Arg10GlufsTer208
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2402
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg10GlufsTer208
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: CACACAGCTCTCGG
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/1-144931673-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931673
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931672
    reference: chr 1
allele count: 1
allele frequency: 8.290774026663129e-6
allele num: 120616
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7853delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7853delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.35delT
  hgvsp: ENSP00000316434.9:p.Leu12ArgfsTer210
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7853delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+661delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7853delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.35delT
  hgvsp: ENSP00000433392.1:p.Leu12ArgfsTer210
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9654delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7853delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7853delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7853delT
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu12ArgfsTer210
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: CA
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-144931676-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931676
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931676
    reference: chr 1
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.33G>C
  hgvsp: ENSP00000316434.9:p.Glu11Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+659G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7855G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7855G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7855G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.33G>C
  hgvsp: ENSP00000433392.1:p.Glu11Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7855G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9656G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7855G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7855G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7855G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu11Asp
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

1-144931678-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931678
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931678
    reference: chr 1
allele count: 1
allele frequency: 8.298755186721992e-6
allele num: 120500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.31G>C
  hgvsp: ENSP00000433392.1:p.Glu11Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.31G>C
  hgvsp: ENSP00000316434.9:p.Glu11Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7857G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7857G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7857G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7857G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9658G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7857G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+657G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7857G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7857G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu11Gln
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

1-144931678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931678
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931678
    reference: chr 1
allele count: 1
allele frequency: 8.298755186721992e-6
allele num: 120500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7857G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.31G>A
  hgvsp: ENSP00000433392.1:p.Glu11Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.31G>A
  hgvsp: ENSP00000316434.9:p.Glu11Lys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7857G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7857G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7857G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7857G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7857G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7857G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9658G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+657G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7910
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu11Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum

1-144931679-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931679
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931679
    reference: chr 1
allele count: 1
allele frequency: 8.301097405076952e-6
allele num: 120466
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7858A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.30A>G
  hgvsp: ENST00000529945.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7858A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+656A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.30A>G
  hgvsp: ENST00000313431.9:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9659A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7858A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7858A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7858A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7858A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7858A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg10Arg
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

1-144931680-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931680
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931680
    reference: chr 1
allele count: 1
allele frequency: 8.302475798283047e-6
allele num: 120446
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7859G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7859G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.29G>C
  hgvsp: ENSP00000316434.9:p.Arg10Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.29G>C
  hgvsp: ENSP00000433392.1:p.Arg10Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7859G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9660G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+655G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7859G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7859G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7859G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7859G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg10Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

1-144931681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931681
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931681
    reference: chr 1
allele count: 1
allele frequency: 8.304958059961797e-6
allele num: 120410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7860C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.28C>T
  hgvsp: ENSP00000316434.9:p.Arg10Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7860C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.28C>T
  hgvsp: ENSP00000433392.1:p.Arg10Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7860C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7860C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7860C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+654C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9661C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7860C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7860C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36209
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg10Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-144931682-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931682
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931682
    reference: chr 1
allele count: 1
allele frequency: 8.305647840531562e-6
allele num: 120400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7861C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.27C>G
  hgvsp: ENST00000313431.9:c.27C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7861C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+653C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7861C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9662C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7861C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7861C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.27C>G
  hgvsp: ENST00000529945.1:c.27C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7861C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7861C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala9Ala
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-144931682-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931682
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931682
    reference: chr 1
allele count: 3
allele frequency: 2.491694352159469e-5
allele num: 120400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7861C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7861C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7861C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+653C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7861C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.27C>A
  hgvsp: ENST00000313431.9:c.27C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9662C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.27C>A
  hgvsp: ENST00000529945.1:c.27C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7861C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7861C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7861C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala9Ala
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum

1-144931683-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931683
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931683
    reference: chr 1
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7862C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7862C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.26C>G
  hgvsp: ENSP00000433392.1:p.Ala9Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7862C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9663C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.26C>G
  hgvsp: ENSP00000316434.9:p.Ala9Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7862C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+652C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7862C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7862C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7862C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala9Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-144931688-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931688
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931688
    reference: chr 1
allele count: 1
allele frequency: 8.318913882603488e-6
allele num: 120208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7867C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7867C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+647C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9668C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7867C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7867C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7867C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.21C>T
  hgvsp: ENST00000313431.9:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.21C>T
  hgvsp: ENST00000529945.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7867C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7867C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2843
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile7Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-144931690-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931690
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931690
    reference: chr 1
allele count: 13
allele frequency: 1.082088931062611e-4
allele num: 120138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7869A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7869A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.19A>G
  hgvsp: ENSP00000433392.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7869A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7869A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7869A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+645A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.19A>G
  hgvsp: ENSP00000316434.9:p.Ile7Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7869A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7869A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9670A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile7Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

1-144931697-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931697
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931697
    reference: chr 1
allele count: 1
allele frequency: 8.340422692622062e-6
allele num: 119898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7876T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+638T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.12T>C
  hgvsp: ENST00000529945.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7876T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7876T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9677T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.12T>C
  hgvsp: ENST00000313431.9:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7876T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7876T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7876T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7876T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile4Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-144931699-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931699
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931699
    reference: chr 1
allele count: 361
allele frequency: 3.015621084287027e-3
allele num: 119710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7878A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9679A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+636A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.10A>T
  hgvsp: ENSP00000433392.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7878A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7878A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7878A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7878A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.10A>T
  hgvsp: ENSP00000316434.9:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7878A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7878A>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 6.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 5296
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 7.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 4707
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5744
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 6.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 8.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 9.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 5.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 3
hgvs: p.Ile4Phe
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-144931699-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931699
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931696
    reference: chr 1
allele count: 1
allele frequency: 8.353521009105338e-6
allele num: 119710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7881_637-7879delGAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7881_637-7879delGAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7881_1048-7879delGAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9682_196-9680delGAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7881_835-7879delGAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7881_637-7879delGAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+633_-4+635delGAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.7_9delGAG
  hgvsp: ENSP00000316434.9:p.Glu3del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.7_9delGAG
  hgvsp: ENSP00000433392.1:p.Glu3del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7881_1048-7879delGAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7881_637-7879delGAG
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu3del
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: TCTC
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

1-144931702-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931702
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931699
    reference: chr 1
allele count: 1
allele frequency: 8.365540664893172e-6
allele num: 119538
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.4_6delAAG
  hgvsp: ENSP00000433392.1:p.Lys2del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9685_196-9683delAAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7884_637-7882delAAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7884_637-7882delAAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7884_1048-7882delAAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+630_-4+632delAAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7884_1048-7882delAAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.4_6delAAG
  hgvsp: ENSP00000316434.9:p.Lys2del
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7884_637-7882delAAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7884_835-7882delAAG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7884_637-7882delAAG
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys2del
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: CCTT
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

1-144931705-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931705
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931705
    reference: chr 1
allele count: 1
allele frequency: 8.393345755485052e-6
allele num: 119142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7884A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9685A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.4A>C
  hgvsp: ENSP00000316434.9:p.Lys2Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7884A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.4A>C
  hgvsp: ENSP00000433392.1:p.Lys2Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+630A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7884A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7884A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7884A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7884A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7884A>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5041
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys2Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

1-144931713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931713
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931713
    reference: chr 1
allele count: 2
allele frequency: 1.691932864103952e-5
allele num: 118208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7892G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7892G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7892G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7892G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-5G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9693G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+622G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7892G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7892G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7892G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

1-144931719-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931719
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931719
    reference: chr 1
allele count: 4
allele frequency: 3.398932735121172e-5
allele num: 117684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7898T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7898T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7898T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7898T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-11T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7898T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7898T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-11T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+616T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7898T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9699T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-144931721-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931721
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931721
    reference: chr 1
allele count: 54
allele frequency: 4.590509546559668e-4
allele num: 117634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7900G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-13G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7900G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+614G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7900G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7900G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7900G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9701G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-13G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7900G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7900G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6524
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5033
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

1-144931721-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931721
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931721
    reference: chr 1
allele count: 4
allele frequency: 3.40037744189605e-5
allele num: 117634
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7900G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-13G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7900G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9701G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7900G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7900G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+614G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7900G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7900G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7900G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

1-144931722-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931722
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931722
    reference: chr 1
allele count: 1
allele frequency: 8.505137102810097e-6
allele num: 117576
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7901C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9702C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7901C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-14C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7901C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7901C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-14C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+613C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7901C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7901C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7901C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

1-144931722-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931722
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931722
    reference: chr 1
allele count: 1
allele frequency: 8.505137102810097e-6
allele num: 117576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7901C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7901C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-14C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7901C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7901C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+613C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7901C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7901C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7901C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-14C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9702C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6481
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5884
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

1-144931723-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931723
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931723
    reference: chr 1
allele count: 1
allele frequency: 8.512666848270226e-6
allele num: 117472
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7902C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7902C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7902C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9703C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+612C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7902C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7902C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7902C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7902C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

1-144931723-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931723
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931723
    reference: chr 1
allele count: 2
allele frequency: 1.702533369654045e-5
allele num: 117472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7902C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7902C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7902C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7902C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7902C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-15C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9703C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7902C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-15C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7902C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+612C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 6462
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

1-144931726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931726
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931726
    reference: chr 1
allele count: 1
allele frequency: 8.528784648187633e-6
allele num: 117250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9706C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7905C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7905C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7905C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7905C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-18C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+609C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7905C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7905C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7905C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-144931727-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931727
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931727
    reference: chr 1
allele count: 35966
allele frequency: 3.08959711365003e-1
allele num: 116410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7906C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7906C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7906C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7906C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+608C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7906C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-19C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9707C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-19C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7906C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7906C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 6414
  bin: 3.25e1
  variant carriers: 1412
genotype depth: GenotypeDepth
  all individuals: 4684
  bin: 5.25e1
  variant carriers: 3476
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 5.75e1
  variant carriers: 3381
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 2.75e1
  variant carriers: 935
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 1.25e1
  variant carriers: 484
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 8.75e1
  variant carriers: 1141
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.75e1
  variant carriers: 496
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 2.5e0
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 7.5e0
  variant carriers: 431
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 2.25e1
  variant carriers: 583
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 2014
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 4.75e1
  variant carriers: 3329
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 6.75e1
  variant carriers: 2711
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 2293
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.25e1
  variant carriers: 751
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 7.75e1
  variant carriers: 1841
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 4.25e1
  variant carriers: 2730
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 9.75e1
  variant carriers: 3871
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 6.25e1
  variant carriers: 3162
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 8.25e1
  variant carriers: 1429
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 92
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-144931728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931728
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931728
    reference: chr 1
allele count: 12
allele frequency: 1.030184403008138e-4
allele num: 116484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7907G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9708G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-20G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7907G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7907G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7907G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7907G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7907G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7907G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-20G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+607G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13829
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-144931730-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931730
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931730
    reference: chr 1
allele count: 1
allele frequency: 8.607629803057431e-6
allele num: 116176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-22T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9710T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-22T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7909T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7909T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+605T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7909T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7909T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7909T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7909T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7909T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4529
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ

1-144931734-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931734
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931733
    reference: chr 1
allele count: 14
allele frequency: 1.208855731703105e-4
allele num: 115812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7914delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-27delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7914delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9715delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7914delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-27delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7914delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7914delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7914delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+600delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7914delG
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13304
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: TC
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS

1-144931735-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931735
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931735
    reference: chr 1
allele count: 2
allele frequency: 1.7307625739901e-5
allele num: 115556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+600G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7914G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7914G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7914G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7914G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-27G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7914G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7914G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-27G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9715G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7914G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 192
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genotype depth: GenotypeDepth
  all individuals: 1541
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genotype depth: GenotypeDepth
  all individuals: 602
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genotype depth: GenotypeDepth
  all individuals: 1338
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genotype depth: GenotypeDepth
  all individuals: 4344
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13153
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 264
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genotype depth: GenotypeDepth
  all individuals: 799
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genotype depth: GenotypeDepth
  all individuals: 1398
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2809
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genotype depth: GenotypeDepth
  all individuals: 803
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genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

1-144931736-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931736
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931736
    reference: chr 1
allele count: 2
allele frequency: 1.730732619117673e-5
allele num: 115558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-28G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+599G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7915G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7915G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7915G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7915G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-28G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7915G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9716G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7915G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7915G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
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genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 1972
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6650
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genotype depth: GenotypeDepth
  all individuals: 1543
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genotype depth: GenotypeDepth
  all individuals: 193
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genotype depth: GenotypeDepth
  all individuals: 804
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genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 2007
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9357
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 2811
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genotype depth: GenotypeDepth
  all individuals: 1399
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genotype depth: GenotypeDepth
  all individuals: 13136
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 264
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genotype depth: GenotypeDepth
  all individuals: 799
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genotype quality: GenotypeQuality
  all individuals: 4513
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-144931737-C-CGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931740
    reference: chr 1
allele count: 1
allele frequency: 8.667614325832958e-6
allele num: 115372
alternate allele: CGGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9718_196-9717insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-30_-29insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+597_-4+598insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7917_637-7916insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7917_835-7916insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7917_637-7916insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-30_-29insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7917_1048-7916insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7917_1048-7916insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7917_637-7916insCCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7917_637-7916insCCC
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1120
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genotype depth: GenotypeDepth
  all individuals: 795
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genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2113
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

1-144931737-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931737
    reference: chr 1
allele count: 11
allele frequency: 9.534375758416253e-5
allele num: 115372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9717G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7916G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7916G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7916G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7916G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-29G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7916G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-29G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7916G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+598G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7916G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9068
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-144931737-CGAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931734
    reference: chr 1
allele count: 512
allele frequency: 4.437818534826474e-3
allele num: 115372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9720_196-9718delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7919_637-7917delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-32_-30delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+595_-4+597delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7919_637-7917delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7919_835-7917delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7919_637-7917delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-32_-30delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7919_1048-7917delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7919_637-7917delCTC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7919_1048-7917delCTC
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 4.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 5.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 5.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 4.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 13004
  bin: 3.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 6.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9068
  bin: 2.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: CGAG
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-144931738-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931738
    reference: chr 1
allele count: 3
allele frequency: 2.624671916010499e-5
allele num: 114300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-30C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7917C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7917C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7917C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-30C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9718C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7917C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+597C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7917C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7917C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7917C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3452
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

1-144931738-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931738
    reference: chr 1
allele count: 1
allele frequency: 8.748906386701662e-6
allele num: 114300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7917C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-30C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7917C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7917C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-30C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9718C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7917C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+597C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7917C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7917C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7917C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3452
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-144931739-A-AGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931739
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931742
    reference: chr 1
allele count: 4211
allele frequency: 3.736800070991215e-2
allele num: 112690
alternate allele: AGGC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7921_1048-7919dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-34_-32dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7921_637-7919dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7921_835-7919dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7921_637-7919dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7921_1048-7919dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+593_-4+595dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7921_637-7919dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-34_-32dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7921_637-7919dupGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9722_196-9720dupGCC
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.75e1
  variant carriers: 966
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 2.25e1
  variant carriers: 729
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.75e1
  variant carriers: 388
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 13166
  bin: 3.25e1
  variant carriers: 745
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 4.75e1
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 298
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 5.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.75e1
  variant carriers: 504
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 5.25e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 7.5e0
  variant carriers: 2
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

1-144931739-A-AGGCGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931739
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931745
    reference: chr 1
allele count: 6
allele frequency: 5.324341112787293e-5
allele num: 112690
alternate allele: AGGCGGC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-37_-32dupGCCGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+590_-4+595dupGCCGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-37_-32dupGCCGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13166
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2274
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-144931739-A-AGGCGGCGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931739
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931748
    reference: chr 1
allele count: 1
allele frequency: 8.873901854645487e-6
allele num: 112690
alternate allele: AGGCGGCGGC
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-40_-32dupGCCGCCGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-40_-32dupGCCGCCGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4870
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-144931739-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931739
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931739
    reference: chr 1
allele count: 15
allele frequency: 1.331085278196823e-4
allele num: 112690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7918T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7918T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-31T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-31T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7918T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+596T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9719T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7918T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7918T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7918T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7918T>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-144931739-AGGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931739
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931736
    reference: chr 1
allele count: 234
allele frequency: 2.076493033987044e-3
allele num: 112690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7921_637-7919delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7921_835-7919delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7921_637-7919delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9722_196-9720delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+593_-4+595delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-34_-32delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-34_-32delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7921_1048-7919delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7921_1048-7919delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7921_637-7919delGCC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7921_637-7919delGCC
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 13166
  bin: 3.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.75e1
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genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 313
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2306
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genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 3.75e1
  variant carriers: 15
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
reference allele: AGGC
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

1-144931739-AGGCGGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931739
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931733
    reference: chr 1
allele count: 6
allele frequency: 5.324341112787293e-5
allele num: 112690
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
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genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 2.25e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
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genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 245
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 385
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genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 360
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4870
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 171
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genotype quality: GenotypeQuality
  all individuals: 809
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 2.75e1
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 2
  allele frequency: 2.434867299732165e-4
  allele num: 8214
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.177301624676242e-4
  allele num: 8494
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 842
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6484
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: AGGCGGC
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-144931740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931740
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931740
    reference: chr 1
allele count: 1
allele frequency: 9.851246182642105e-6
allele num: 101510
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7919C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7919C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-32C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9720C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7919C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7919C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7919C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+595C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7919C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7919C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

1-144931741-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931741
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931741
    reference: chr 1
allele count: 1
allele frequency: 9.055018291136948e-6
allele num: 110436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7920C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7920C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7920C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7920C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9721C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7920C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7920C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7920C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+594C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

1-144931742-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931742
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931742
    reference: chr 1
allele count: 1
allele frequency: 8.985371814685692e-6
allele num: 111292
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7921G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7921G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7921G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-34G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+593G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9722G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7921G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7921G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7921G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7921G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12753
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9577
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

1-144931743-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931743
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931743
    reference: chr 1
allele count: 1
allele frequency: 8.849557522123894e-6
allele num: 113000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7922C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-35C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9723C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7922C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7922C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7922C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7922C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7922C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+592C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7922C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
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genotype depth: GenotypeDepth
  all individuals: 2585
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genotype depth: GenotypeDepth
  all individuals: 2255
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 4.25e1
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genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 3752
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

1-144931743-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931743
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931743
    reference: chr 1
allele count: 1
allele frequency: 8.849557522123894e-6
allele num: 113000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7922C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7922C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7922C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+592C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9723C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-35C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7922C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7922C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-35C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7922C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7922C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-144931745-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931745
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931745
    reference: chr 1
allele count: 2
allele frequency: 1.757747271097362e-5
allele num: 113782
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-37G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7924G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7924G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7924G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7924G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7924G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9725G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-37G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7924G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7924G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+590G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5436
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

1-144931745-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931745
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931745
    reference: chr 1
allele count: 1
allele frequency: 8.788736355486809e-6
allele num: 113782
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7924G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-37G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-37G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7924G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7924G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9725G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7924G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7924G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7924G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+590G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7924G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

1-144931746-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931746
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931746
    reference: chr 1
allele count: 1
allele frequency: 8.781173164734809e-6
allele num: 113880
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7925C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7925C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-38C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+589C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-38C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9726C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7925C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7925C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7925C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7925C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7925C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12665
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8094
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-144931748-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931748
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931748
    reference: chr 1
allele count: 3
allele frequency: 2.634351949420443e-5
allele num: 113880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9728G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7927G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-40G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+587G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7927G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7927G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7927G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-40G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7927G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7927G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7927G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8045
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

1-144931748-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931748
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931748
    reference: chr 1
allele count: 1
allele frequency: 8.781173164734809e-6
allele num: 113880
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7927G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7927G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-40G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+587G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7927G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9728G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7927G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-40G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7927G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7927G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7927G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8045
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10705
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

1-144931749-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931749
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931749
    reference: chr 1
allele count: 1
allele frequency: 8.783332747777817e-6
allele num: 113852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-41C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7928C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-41C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9729C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+586C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7928C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7928C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7928C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7928C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7928C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7928C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7962
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genotype depth: GenotypeDepth
  all individuals: 5384
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genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 4323
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
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genotype depth: GenotypeDepth
  all individuals: 10470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-144931751-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931751
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931751
    reference: chr 1
allele count: 2
allele frequency: 1.759695924544239e-5
allele num: 113656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7930G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7930G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7930G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-43G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-43G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7930G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7930G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9731G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+584G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7930G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7930G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

1-144931751-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931751
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931750
    reference: chr 1
allele count: 4
allele frequency: 3.519391849088478e-5
allele num: 113656
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7931delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7931delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9732delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7931delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-44delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-44delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7931delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7931delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+583delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7931delC
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7931delC
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: CG
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-144931752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931752
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931752
    reference: chr 1
allele count: 3
allele frequency: 2.646109337237815e-5
allele num: 113374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-44C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7931C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+583C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7931C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-44C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7931C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9732C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7931C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7931C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7931C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7931C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9516
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-144931752-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931752
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931752
    reference: chr 1
allele count: 1
allele frequency: 8.820364457459382e-6
allele num: 113374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-44C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7931C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7931C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7931C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9732C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-44C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+583C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7931C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7931C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7931C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7931C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ

1-144931754-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931754
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931754
    reference: chr 1
allele count: 2
allele frequency: 1.764228502875693e-5
allele num: 113364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-46G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7933G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7933G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-46G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+581G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7933G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7933G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7933G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7933G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7933G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9734G>C
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2329
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-144931754-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931754
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931754
    reference: chr 1
allele count: 3
allele frequency: 2.646342754313539e-5
allele num: 113364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7933G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+581G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7933G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7933G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7933G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7933G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9734G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-46G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-46G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7933G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7933G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-144931755-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144931755
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144931755
    reference: chr 1
allele count: 2
allele frequency: 1.769379124865085e-5
allele num: 113034
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.-4+580C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-9735C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.637-7934C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.835-7934C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1048-7934C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.-47C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.637-7934C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.-47C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.637-7934C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1048-7934C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.637-7934C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

1-144946513-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144946513
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144946513
    reference: chr 1
allele count: 3
allele frequency: 3.943528669453427e-5
allele num: 76074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1047+112C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.636+112C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.636+112C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000530078
  gene symbol: PDE4DIP
  hgvsc: ENST00000530078.1:n.1292C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1047+112C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436751
  ensembl transcript: ENST00000532801
  gene symbol: PDE4DIP
  hgvsc: ENST00000532801.1:c.196-24493C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.834+112C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000431138
  ensembl transcript: ENST00000496572
  gene symbol: PDE4DIP
  hgvsc: ENST00000496572.3:c.*109+112C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.636+112C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.636+112C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5638
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5165
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2878
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4068
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36226
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506341698550899e-5
allele num: 66386
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: 7.15e-1

VQSLOD
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InbreedingCoeff
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SIO_000300: -2.0e-4

QD
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SIO_000300: 4.39e0

ReadPosRankSum
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SIO_000300: 7.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

FS
type: SiteQuality
SIO_000300: 7.403e0

DP
type: SiteQuality
SIO_000300: 3.278618e6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66358
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.277598e6

FS
type: SiteQuality
SIO_000300: 8.167e0

BaseQRankSum
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SIO_000300: 7.34e-1

MQRankSum
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SIO_000300: 4.0e-3

ReadPosRankSum
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SIO_000300: 1.2e0

VQSLOD
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SIO_000300: -2.015e0

QD
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SIO_000300: 4.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.91e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.939864209505335e-4
allele num: 10310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66354
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.911e1

FS
type: SiteQuality
SIO_000300: 6.31e-1

ReadPosRankSum
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SIO_000300: -2.46e-1

BaseQRankSum
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SIO_000300: 1.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

InbreedingCoeff
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SIO_000300: -3.0e-4

MQRankSum
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QD
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DP
type: SiteQuality
SIO_000300: 3.277463e6

VQSLOD
type: SiteQuality
SIO_000300: -1.587e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508295625942685e-5
allele num: 66300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.38e-1

QD
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SIO_000300: 3.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.24e-1

DP
type: SiteQuality
SIO_000300: 3.276016e6

FS
type: SiteQuality
SIO_000300: 1.469e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.359e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028467595396729e-4
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.593809441466367e-4
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.034820916689297e-5
allele num: 66282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

QD
type: SiteQuality
SIO_000300: 3.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

DP
type: SiteQuality
SIO_000300: 3.275921e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.72762645914397e-5
allele num: 10280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66228
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.21e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.273389e6

FS
type: SiteQuality
SIO_000300: 3.389e0

InbreedingCoeff
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SIO_000300: -3.0e-4

ClippingRankSum
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SIO_000300: -8.22e-1

BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.8e-1

MQ
type: SiteQuality
SIO_000300: 5.231e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 902
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DP
type: SiteQuality
SIO_000300: 3.270703e6

MQ
type: SiteQuality
SIO_000300: 6.019e1

QD
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SIO_000300: 3.54e0

BaseQRankSum
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SIO_000300: -1.011e0

VQSLOD
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SIO_000300: -2.278e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.771350400625366e-5
allele num: 10234
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 5.876e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

DP
type: SiteQuality
SIO_000300: 3.268452e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513134003147319e-5
allele num: 66088
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

QD
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ClippingRankSum
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SIO_000300: -3.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.268011e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.19e-1

QD
type: SiteQuality
SIO_000300: 4.09e0

DP
type: SiteQuality
SIO_000300: 3.268011e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.267181e6

FS
type: SiteQuality
SIO_000300: 9.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.36e0

QD
type: SiteQuality
SIO_000300: 3.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.798e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.514004542013626e-5
allele num: 66050
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.643e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

FS
type: SiteQuality
SIO_000300: 7.64e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 3.61e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66022
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66014
num of homozygotes: 0

Other
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VQSLOD
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.029660375071954e-5
allele num: 66014
num of homozygotes: 0

BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQ
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QD
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65976
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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InbreedingCoeff
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SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.308e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 6.802e0

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

BaseQRankSum
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SIO_000300: -1.514e0

DP
type: SiteQuality
SIO_000300: 3.263759e6

QD
type: SiteQuality
SIO_000300: 2.28e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.61e-1

ReadPosRankSum
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SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.147e0

FS
type: SiteQuality
SIO_000300: 6.389e0

VQSLOD
type: SiteQuality
SIO_000300: -2.611e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.923e0

QD
type: SiteQuality
SIO_000300: 3.84e0

DP
type: SiteQuality
SIO_000300: 3.260511e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.215103739481758e-4
allele num: 65838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.537205081669691e-4
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731301939058172e-4
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

QD
type: SiteQuality
SIO_000300: 4.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.655e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 3.17e0

DP
type: SiteQuality
SIO_000300: 3.258519e6

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.912767644726408e-5
allele num: 10088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.992e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

DP
type: SiteQuality
SIO_000300: 3.251323e6

GenotypeQuality
all individuals: 6981
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1705
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variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 224
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GenotypeQuality
all individuals: 2819
bin: 7.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 175
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GenotypeQuality
all individuals: 36205
bin: 9.75e1
variant carriers: 338

GenotypeQuality
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GenotypeQuality
all individuals: 1419
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3814
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GenotypeQuality
all individuals: 2682
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1827
bin: 7.25e1
variant carriers: 1

Latino
type: Population
allele count: 41
allele frequency: 3.551628551628552e-3
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.974890394579514e-4
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 309
allele frequency: 4.713814986575543e-3
allele num: 65552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.355704697986577e-3
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

FS
type: SiteQuality
SIO_000300: 1.466e0

DP
type: SiteQuality
SIO_000300: 3.251587e6

VQSLOD
type: SiteQuality
SIO_000300: 8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 3.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2389
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.251587e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

FS
type: SiteQuality
SIO_000300: 1.466e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: 8.699999999999999e-2

QD
type: SiteQuality
SIO_000300: 3.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528117359413203e-5
allele num: 65440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.99e0

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -1.718e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 3.239128e6

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.962e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3720
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GenotypeQuality
all individuals: 36140
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534495457893445e-5
allele num: 65168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.02e0

VQSLOD
type: SiteQuality
SIO_000300: -1.243e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
SIO_000300: 3.823e0

DP
type: SiteQuality
SIO_000300: 3.233451e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

GenotypeQuality
all individuals: 291
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.339181286549708e-4
allele num: 8550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.795e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

FS
type: SiteQuality
SIO_000300: 1.661e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 3.222968e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.318e0

QD
type: SiteQuality
SIO_000300: 4.54e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.427479062993082e-4
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.215443e6

BaseQRankSum
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SIO_000300: 4.98e-1

QD
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SIO_000300: 5.97e0

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

ReadPosRankSum
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SIO_000300: -5.649999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

FS
type: SiteQuality
SIO_000300: 3.905e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 48

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

African
type: Population
allele count: 50
allele frequency: 5.2999788000848e-3
allele num: 9434
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.736714136853074e-4
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.11594428691615e-5
allele num: 64186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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DP
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BaseQRankSum
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QD
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SIO_000300: 5.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 2.667e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.428068471530897e-4
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.214319e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

QD
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 2.667e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559040878051823e-5
allele num: 64142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

BaseQRankSum
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SIO_000300: -1.691e0

ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 5.474e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.213041e6

VQSLOD
type: SiteQuality
SIO_000300: -2.596e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.213041e6

VQSLOD
type: SiteQuality
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QD
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SIO_000300: 2.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

BaseQRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 5.474e0

ClippingRankSum
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SIO_000300: -4.73e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
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SIO_000300: 6.929999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560792882784454e-5
allele num: 64070
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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SIO_000300: -2.42e-1

VQSLOD
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SIO_000300: -1.49e0

DP
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SIO_000300: 3.211891e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214624073849144e-4
allele num: 16466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 5.73e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

FS
type: SiteQuality
SIO_000300: 7.169e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.246e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

DP
type: SiteQuality
SIO_000300: 3.211891e6

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
all individuals: 841
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5553
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63934
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.209437e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

VQSLOD
type: SiteQuality
SIO_000300: -3.041e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.767e0

GenotypeQuality
all individuals: 1472
bin: 7.25e1
variant carriers: 153

GenotypeQuality
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bin: 4.75e1
variant carriers: 87

GenotypeQuality
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GenotypeQuality
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variant carriers: 52

GenotypeQuality
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variant carriers: 53

GenotypeQuality
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variant carriers: 159

GenotypeQuality
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variant carriers: 33

GenotypeQuality
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GenotypeQuality
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variant carriers: 146

GenotypeQuality
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variant carriers: 42

GenotypeQuality
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variant carriers: 201

GenotypeQuality
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variant carriers: 160

GenotypeQuality
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bin: 5.25e1
variant carriers: 120

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 226

GenotypeQuality
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variant carriers: 62

GenotypeQuality
all individuals: 41142
bin: 9.75e1
variant carriers: 34554

European (Non-Finnish)
type: Population
allele count: 22605
allele frequency: 3.565232477446218e-1
allele num: 63404
num of homozygotes: 0

African
type: Population
allele count: 4205
allele frequency: 4.555796316359697e-1
allele num: 9230
num of homozygotes: 0

East Asian
type: Population
allele count: 593
allele frequency: 6.979755178907722e-2
allele num: 8496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2169
allele frequency: 3.309429356118401e-1
allele num: 6554
num of homozygotes: 0

Other
type: Population
allele count: 274
allele frequency: 3.142201834862385e-1
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 2160
allele frequency: 1.889102676228791e-1
allele num: 11434
num of homozygotes: 0

South Asian
type: Population
allele count: 3960
allele frequency: 2.411693057247259e-1
allele num: 16420
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.483e0

QD
type: SiteQuality
SIO_000300: 7.78e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

DP
type: SiteQuality
SIO_000300: 3.191859e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.587e0

VQSLOD
type: SiteQuality
SIO_000300: 2.128e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.542e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-1

GenotypeQuality
all individuals: 1839
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variant carriers: 0

GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 5399
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.044750130593766e-3
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.07e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
SIO_000300: 2.316076e6

VQSLOD
type: SiteQuality
SIO_000300: -2.997e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

QD
type: SiteQuality
SIO_000300: 2.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.927e0

GenotypeQuality
all individuals: 12378
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 149
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GenotypeQuality
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GenotypeQuality
all individuals: 544
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 16393
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63256
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.273e0

DP
type: SiteQuality
SIO_000300: 2.306054e6

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 2.193e0

VQSLOD
type: SiteQuality
SIO_000300: -3.549e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

QD
type: SiteQuality
SIO_000300: 3.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.120322652924042e-4
allele num: 8926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.744647105471848e-4
allele num: 63050
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216101179618144e-4
allele num: 16446
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.42e-1

DP
type: SiteQuality
SIO_000300: 2.291492e6

VQSLOD
type: SiteQuality
SIO_000300: 2.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 4.38e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

FS
type: SiteQuality
SIO_000300: 6.767e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 825
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.179751343444942e-5
allele num: 62898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 5.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.03e-1

QD
type: SiteQuality
SIO_000300: 3.09e0

MQ
type: SiteQuality
SIO_000300: 6.069e1

VQSLOD
type: SiteQuality
SIO_000300: -2.327e0

DP
type: SiteQuality
SIO_000300: 2.282405e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 84
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.179650238473768e-5
allele num: 62900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

DP
type: SiteQuality
SIO_000300: 2.282426e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -8.500000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-1

QD
type: SiteQuality
SIO_000300: 2.77e0

GenotypeQuality
all individuals: 6994
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 185
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variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16589
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5328
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4485
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.524390243902439e-4
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62792
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 5.994e1

VQSLOD
type: SiteQuality
SIO_000300: 4.18e0

DP
type: SiteQuality
SIO_000300: 2.273956e6

QD
type: SiteQuality
SIO_000300: 5.58e0

GenotypeQuality
all individuals: 232
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6994
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 491
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 1.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16589
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 10963
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4485
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.495281370150297e-4
allele num: 11444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.370238246910434e-5
allele num: 62792
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.403675970047651e-4
allele num: 8814
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.58e0

VQSLOD
type: SiteQuality
SIO_000300: 4.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e-1

DP
type: SiteQuality
SIO_000300: 2.273956e6

MQ
type: SiteQuality
SIO_000300: 5.994e1

GenotypeQuality
all individuals: 6994
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 185
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1474
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4485
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 192
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 761
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 232
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 2077
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 16589
bin: 9.75e1
variant carriers: 472

GenotypeQuality
all individuals: 3305
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 5328
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3455
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 10963
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 491
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 256
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 7

Latino
type: Population
allele count: 33
allele frequency: 2.883607130373995e-3
allele num: 11444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.371951219512195e-3
allele num: 6560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.52099817407182e-4
allele num: 16430
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 9.076469253460404e-4
allele num: 8814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 446
allele frequency: 7.102815645305134e-3
allele num: 62792
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.298850574712644e-3
allele num: 870
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

QD
type: SiteQuality
SIO_000300: 5.58e0

MQ
type: SiteQuality
SIO_000300: 5.994e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

DP
type: SiteQuality
SIO_000300: 2.273956e6

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16106
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6949
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 178
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
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GenotypeQuality
all individuals: 4476
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10674
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.848406490400155e-5
allele num: 61876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.3335e1

QD
type: SiteQuality
SIO_000300: 2.85e0

VQSLOD
type: SiteQuality
SIO_000300: -3.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

DP
type: SiteQuality
SIO_000300: 2.241476e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

GenotypeQuality
all individuals: 826
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4476
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variant carriers: 0

GenotypeQuality
all individuals: 10674
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6949
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.616135496800052e-5
allele num: 61876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.241476e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 2.3335e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.99e0

QD
type: SiteQuality
SIO_000300: 2.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

GenotypeQuality
all individuals: 16823
bin: 9.75e1
variant carriers: 3981

GenotypeQuality
all individuals: 709
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 385
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10024
bin: 6.25e1
variant carriers: 18

GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1048
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 171
bin: 5.75e1
variant carriers: 20

GenotypeQuality
all individuals: 1264
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 809
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 11

GenotypeQuality
all individuals: 356
bin: 4.25e1
variant carriers: 9

GenotypeQuality
all individuals: 2274
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1906
bin: 8.75e1
variant carriers: 39

GenotypeQuality
all individuals: 6541
bin: 6.75e1
variant carriers: 24

GenotypeQuality
all individuals: 4870
bin: 7.75e1
variant carriers: 26

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 4066
bin: 8.25e1
variant carriers: 29

GenotypeQuality
all individuals: 2883
bin: 9.25e1
variant carriers: 33

GenotypeQuality
all individuals: 3237
bin: 7.25e1
variant carriers: 21

African
type: Population
allele count: 820
allele frequency: 9.653873322345184e-2
allele num: 8494
num of homozygotes: 0

South Asian
type: Population
allele count: 479
allele frequency: 2.964475801460577e-2
allele num: 16158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 825
allele frequency: 1.344962504075644e-2
allele num: 61340
num of homozygotes: 0

Other
type: Population
allele count: 21
allele frequency: 2.494061757719715e-2
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 70
allele frequency: 1.07958050586058e-2
allele num: 6484
num of homozygotes: 0

Latino
type: Population
allele count: 1118
allele frequency: 1.001971679512457e-1
allele num: 11158
num of homozygotes: 0

East Asian
type: Population
allele count: 878
allele frequency: 1.06890674458242e-1
allele num: 8214
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.51e0

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 5.933e1

DP
type: SiteQuality
SIO_000300: 2.101249e6

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

GenotypeQuality
all individuals: 10024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1551
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variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4066
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1048
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variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4870
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2883
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6541
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3237
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16823
bin: 9.75e1
variant carriers: 6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.890772742093251e-5
allele num: 61340
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.962179602079225e-5
allele num: 11158
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.354603249352484e-4
allele num: 8494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

DP
type: SiteQuality
SIO_000300: 2.101249e6

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 7.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

GenotypeQuality
all individuals: 1551
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
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variant carriers: 0

GenotypeQuality
all individuals: 360
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variant carriers: 0

GenotypeQuality
all individuals: 6541
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variant carriers: 0

GenotypeQuality
all individuals: 2883
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
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GenotypeQuality
all individuals: 16823
bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3237
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.962179602079225e-5
allele num: 11158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

DP
type: SiteQuality
SIO_000300: 2.101249e6

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

QD
type: SiteQuality
SIO_000300: 7.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10024
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.542257865515114e-4
allele num: 6484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.28236061297685e-4
allele num: 61340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.101249e6

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 21

GenotypeQuality
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bin: 9.25e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 36

GenotypeQuality
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variant carriers: 17

GenotypeQuality
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bin: 6.75e1
variant carriers: 12

GenotypeQuality
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bin: 7.75e1
variant carriers: 8

GenotypeQuality
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
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variant carriers: 20

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
all individuals: 3237
bin: 7.25e1
variant carriers: 10

GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 22

European (Non-Finnish)
type: Population
allele count: 141
allele frequency: 2.298663188783828e-3
allele num: 61340
num of homozygotes: 0

South Asian
type: Population
allele count: 39
allele frequency: 2.413665057556628e-3
allele num: 16158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.388032078963603e-3
allele num: 6484
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.460920379839299e-3
allele num: 8214
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.344326940311884e-3
allele num: 11158
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.187648456057007e-3
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 2.001412761949612e-3
allele num: 8494
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

QD
type: SiteQuality
SIO_000300: 7.51e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

DP
type: SiteQuality
SIO_000300: 2.101249e6

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.890772742093251e-5
allele num: 61340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

DP
type: SiteQuality
SIO_000300: 2.101249e6

QD
type: SiteQuality
SIO_000300: 7.51e0

GenotypeQuality
all individuals: 1100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3903
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variant carriers: 0

GenotypeQuality
all individuals: 2593
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.720933434294762e-5
allele num: 58108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14810
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.989e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

DP
type: SiteQuality
SIO_000300: 2.087633e6

FS
type: SiteQuality
SIO_000300: 8.273e0

QD
type: SiteQuality
SIO_000300: 2.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.98e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.105e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.672912205567452e-5
allele num: 59776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.292e0

FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.59e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.650600818698006e-5
allele num: 60584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -6.19e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.131207847946045e-5
allele num: 16310
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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DP
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 866
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.626703972411101e-5
allele num: 61474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

QD
type: SiteQuality
SIO_000300: 6.89e0

FS
type: SiteQuality
SIO_000300: 9.506e0

DP
type: SiteQuality
SIO_000300: 2.057671e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

GenotypeQuality
all individuals: 1420
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14041
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 2
allele frequency: 1.219809709685289e-4
allele num: 16396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-1

FS
type: SiteQuality
SIO_000300: 3.285e0

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

DP
type: SiteQuality
SIO_000300: 2.039824e6

VQSLOD
type: SiteQuality
SIO_000300: -2.394e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.099048548426445e-5
allele num: 16396
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.039824e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

FS
type: SiteQuality
SIO_000300: 3.285e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
type: SiteQuality
SIO_000300: -2.394e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-1

QD
type: SiteQuality
SIO_000300: 3.3e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.613684040664838e-5
allele num: 61970
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.67e0

FS
type: SiteQuality
SIO_000300: 7.637e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

DP
type: SiteQuality
SIO_000300: 2.037591e6

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.212e0

VQSLOD
type: SiteQuality
SIO_000300: 2.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

GenotypeQuality
all individuals: 708
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1101
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2964
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variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.841833440929632e-5
allele num: 61960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

VQSLOD
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SIO_000300: -2.309e0

DP
type: SiteQuality
SIO_000300: 2.035359e6

InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 6.728e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61960
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.182872013248167e-4
allele num: 8454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -9.66e-1

VQSLOD
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SIO_000300: -2.309e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.785802143735723e-5
allele num: 11382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.02726e6

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.38038562247084e-4
allele num: 8402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.016141e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQ
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SIO_000300: 5.972e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5966
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.219809709685289e-4
allele num: 16396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.233734316388565e-5
allele num: 61848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.05e0

DP
type: SiteQuality
SIO_000300: 2.016141e6

QD
type: SiteQuality
SIO_000300: 4.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.034e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-3

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

GenotypeQuality
all individuals: 14029
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9220
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1831
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.621060822202049e-5
allele num: 61688
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.220554131575735e-4
allele num: 16386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.933e1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

DP
type: SiteQuality
SIO_000300: 1.999681e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.309e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

QD
type: SiteQuality
SIO_000300: 5.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.08e-1

GenotypeQuality
all individuals: 1795
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3804
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14029
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9220
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1831
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.812125484666901e-5
allele num: 11348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.309e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

DP
type: SiteQuality
SIO_000300: 1.999681e6

MQ
type: SiteQuality
SIO_000300: 5.933e1

GenotypeQuality
all individuals: 438
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9713
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 461
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14031
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1828
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.242647297253478e-5
allele num: 61678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

FS
type: SiteQuality
SIO_000300: 9.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.997388e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.61e-1

QD
type: SiteQuality
SIO_000300: 7.29e0

GenotypeQuality
all individuals: 1175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14031
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1537
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9713
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.242647297253478e-5
allele num: 61678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.19703136222169e-4
allele num: 8354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

FS
type: SiteQuality
SIO_000300: 9.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.61e-1

QD
type: SiteQuality
SIO_000300: 7.29e0

DP
type: SiteQuality
SIO_000300: 1.997388e6

GenotypeQuality
all individuals: 4408
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5429
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14016
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1824
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2821
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.221299462628236e-4
allele num: 16376
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.991304e6

QD
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.652e0

VQSLOD
type: SiteQuality
SIO_000300: -2.953e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 2205
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
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variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.75e1
variant carriers: 0