3-190322239-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190322239
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190322239
    reference: chr 3
allele count: 1
allele frequency: 9.733307377846993e-6
allele num: 102740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-4545T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.350+37T>A
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

3-190322240-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190322240
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190322240
    reference: chr 3
allele count: 5
allele frequency: 4.884052591478305e-5
allele num: 102374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-4544T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.350+38T>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13371
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21423
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

3-190322247-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190322247
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190322247
    reference: chr 3
allele count: 1
allele frequency: 1.013849179796014e-5
allele num: 98634
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-4537C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.350+45C>T
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20076
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14966
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

3-190322251-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190322251
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190322251
    reference: chr 3
allele count: 1
allele frequency: 1.055431249208427e-5
allele num: 94748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-4533G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.350+49G>C
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10557
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14715
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

3-190322254-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190322254
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190322254
    reference: chr 3
allele count: 18
allele frequency: 1.919181149376266e-4
allele num: 93790
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-4530C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.350+52C>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10660
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 19199
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 14616
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP

3-190326734-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326734
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326734
    reference: chr 3
allele count: 1
allele frequency: 8.689909277347145e-6
allele num: 115076
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-50A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22039
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

3-190326741-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326741
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326741
    reference: chr 3
allele count: 3
allele frequency: 2.607516601189028e-5
allele num: 115052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-43C>T
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12910
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

3-190326743-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326743
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326743
    reference: chr 3
allele count: 4
allele frequency: 3.470715835140998e-5
allele num: 115250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-41A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

3-190326747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326747
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326747
    reference: chr 3
allele count: 1
allele frequency: 8.673929637082785e-6
allele num: 115288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-37C>T
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

3-190326748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326748
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326748
    reference: chr 3
allele count: 2
allele frequency: 1.730612809996019e-5
allele num: 115566
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-36A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

3-190326751-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326751
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326751
    reference: chr 3
allele count: 1
allele frequency: 8.648424257100357e-6
allele num: 115628
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-33T>C
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/3-190326755-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326755
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326754
    reference: chr 3
allele count: 8
allele frequency: 6.905362013603563e-5
allele num: 115852
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-26delC
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23087
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9960
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14911
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: AC
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

3-190326766-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326766
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326766
    reference: chr 3
allele count: 1
allele frequency: 8.547300762419228e-6
allele num: 116996
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-18G>C
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

3-190326769-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326769
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326769
    reference: chr 3
allele count: 1
allele frequency: 8.518758305789349e-6
allele num: 117388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-73-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.351-15T>C
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23473
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

3-190326787-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326787
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326787
    reference: chr 3
allele count: 1
allele frequency: 8.346966712296751e-6
allele num: 119804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.354C>T
  hgvsp: ENST00000439062.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.354C>T
  hgvsp: ENST00000422940.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.354C>T
  hgvsp: ENST00000317757.3:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.354C>T
  hgvsp: ENST00000453359.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.354C>T
  hgvsp: ENST00000443369.2:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.354C>T
  hgvsp: ENST00000447382.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.354C>T
  hgvsp: ENST00000422485.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.354C>T
  hgvsp: ENST00000413869.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.354C>T
  hgvsp: ENST00000412504.2:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.354C>T
  hgvsp: ENST00000342550.2:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.354C>T
  hgvsp: ENST00000072516.3:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn118Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

3-190326790-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326790
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326790
    reference: chr 3
allele count: 1
allele frequency: 8.324176738920521e-6
allele num: 120132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.357T>C
  hgvsp: ENST00000422940.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.357T>C
  hgvsp: ENST00000447382.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.357T>C
  hgvsp: ENST00000422485.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.357T>C
  hgvsp: ENST00000342550.2:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.357T>C
  hgvsp: ENST00000453359.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.357T>C
  hgvsp: ENST00000439062.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.357T>C
  hgvsp: ENST00000413869.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.357T>C
  hgvsp: ENST00000072516.3:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.357T>C
  hgvsp: ENST00000443369.2:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.357T>C
  hgvsp: ENST00000317757.3:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-67T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.357T>C
  hgvsp: ENST00000412504.2:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr119Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-190326792-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326792
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326792
    reference: chr 3
allele count: 1
allele frequency: 8.315316813570598e-6
allele num: 120260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.359C>A
  hgvsp: ENSP00000416296.1:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.359C>A
  hgvsp: ENSP00000409352.1:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-65C>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.359C>A
  hgvsp: ENSP00000072516.3:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.359C>A
  hgvsp: ENSP00000412053.2:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.359C>A
  hgvsp: ENSP00000412008.1:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.359C>A
  hgvsp: ENSP00000408893.2:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.359C>A
  hgvsp: ENSP00000387371.1:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.359C>A
  hgvsp: ENSP00000314807.3:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.359C>A
  hgvsp: ENSP00000401132.1:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.359C>A
  hgvsp: ENSP00000390541.1:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.359C>A
  hgvsp: ENSP00000345829.2:p.Thr120Lys
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr120Lys
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

3-190326793-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326793
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326793
    reference: chr 3
allele count: 2
allele frequency: 1.661543573980228e-5
allele num: 120370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.360A>G
  hgvsp: ENST00000453359.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.360A>G
  hgvsp: ENST00000342550.2:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.360A>G
  hgvsp: ENST00000422485.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.360A>G
  hgvsp: ENST00000317757.3:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-64A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.360A>G
  hgvsp: ENST00000422940.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.360A>G
  hgvsp: ENST00000412504.2:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.360A>G
  hgvsp: ENST00000072516.3:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.360A>G
  hgvsp: ENST00000413869.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.360A>G
  hgvsp: ENST00000443369.2:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.360A>G
  hgvsp: ENST00000439062.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.360A>G
  hgvsp: ENST00000447382.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr120Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-190326799-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326799
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326799
    reference: chr 3
allele count: 6
allele frequency: 4.974134500596896e-5
allele num: 120624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.366C>T
  hgvsp: ENST00000072516.3:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.366C>T
  hgvsp: ENST00000453359.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.366C>T
  hgvsp: ENST00000422485.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-58C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.366C>T
  hgvsp: ENST00000422940.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.366C>T
  hgvsp: ENST00000447382.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.366C>T
  hgvsp: ENST00000443369.2:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.366C>T
  hgvsp: ENST00000317757.3:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.366C>T
  hgvsp: ENST00000412504.2:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.366C>T
  hgvsp: ENST00000439062.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.366C>T
  hgvsp: ENST00000342550.2:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.366C>T
  hgvsp: ENST00000413869.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys122Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-190326802-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326802
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326802
    reference: chr 3
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.369C>G
  hgvsp: ENSP00000408893.2:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.369C>G
  hgvsp: ENSP00000387371.1:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.369C>G
  hgvsp: ENSP00000345829.2:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.369C>G
  hgvsp: ENSP00000401132.1:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.369C>G
  hgvsp: ENSP00000409352.1:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.369C>G
  hgvsp: ENSP00000072516.3:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.369C>G
  hgvsp: ENSP00000412008.1:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-55C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.369C>G
  hgvsp: ENSP00000412053.2:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.369C>G
  hgvsp: ENSP00000314807.3:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.369C>G
  hgvsp: ENSP00000416296.1:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.369C>G
  hgvsp: ENSP00000390541.1:p.Ser123Arg
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser123Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

3-190326830-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326830
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326830
    reference: chr 3
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.397C>G
  hgvsp: ENSP00000072516.3:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.397C>G
  hgvsp: ENSP00000314807.3:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.397C>G
  hgvsp: ENSP00000412008.1:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.397C>G
  hgvsp: ENSP00000408893.2:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.397C>G
  hgvsp: ENSP00000387371.1:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.397C>G
  hgvsp: ENSP00000345829.2:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.397C>G
  hgvsp: ENSP00000401132.1:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.397C>G
  hgvsp: ENSP00000416296.1:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-27C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.397C>G
  hgvsp: ENSP00000412053.2:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.397C>G
  hgvsp: ENSP00000390541.1:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.397C>G
  hgvsp: ENSP00000409352.1:p.Gln133Glu
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18460
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln133Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

3-190326837-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326837
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326837
    reference: chr 3
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.404A>G
  hgvsp: ENSP00000390541.1:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.404A>G
  hgvsp: ENSP00000412053.2:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.404A>G
  hgvsp: ENSP00000412008.1:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.404A>G
  hgvsp: ENSP00000416296.1:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.404A>G
  hgvsp: ENSP00000387371.1:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.404A>G
  hgvsp: ENSP00000409352.1:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.404A>G
  hgvsp: ENSP00000408893.2:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.404A>G
  hgvsp: ENSP00000345829.2:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.404A>G
  hgvsp: ENSP00000401132.1:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.404A>G
  hgvsp: ENSP00000072516.3:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.404A>G
  hgvsp: ENSP00000314807.3:p.Asp135Gly
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp135Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

3-190326840-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326840
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326840
    reference: chr 3
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-17G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.407G>T
  hgvsp: ENSP00000416296.1:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.407G>T
  hgvsp: ENSP00000412008.1:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.407G>T
  hgvsp: ENSP00000387371.1:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.407G>T
  hgvsp: ENSP00000345829.2:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.407G>T
  hgvsp: ENSP00000409352.1:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.407G>T
  hgvsp: ENSP00000412053.2:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.407G>T
  hgvsp: ENSP00000314807.3:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.407G>T
  hgvsp: ENSP00000390541.1:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.407G>T
  hgvsp: ENSP00000408893.2:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.407G>T
  hgvsp: ENSP00000401132.1:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.407G>T
  hgvsp: ENSP00000072516.3:p.Ser136Ile
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser136Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

3-190326844-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326844
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326844
    reference: chr 3
allele count: 6
allele frequency: 4.953110553427552e-5
allele num: 121136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.411T>C
  hgvsp: ENST00000422940.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.411T>C
  hgvsp: ENST00000439062.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.411T>C
  hgvsp: ENST00000342550.2:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.411T>C
  hgvsp: ENST00000413869.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.411T>C
  hgvsp: ENST00000072516.3:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.411T>C
  hgvsp: ENST00000443369.2:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.411T>C
  hgvsp: ENST00000317757.3:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.411T>C
  hgvsp: ENST00000422485.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.411T>C
  hgvsp: ENST00000412504.2:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.411T>C
  hgvsp: ENST00000453359.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-13T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.411T>C
  hgvsp: ENST00000447382.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys137Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD

3-190326849-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326849
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326849
    reference: chr 3
allele count: 2
allele frequency: 1.650846058605035e-5
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.416A>G
  hgvsp: ENSP00000412053.2:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.416A>G
  hgvsp: ENSP00000314807.3:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.416A>G
  hgvsp: ENSP00000390541.1:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.416A>G
  hgvsp: ENSP00000409352.1:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.416A>G
  hgvsp: ENSP00000416296.1:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.416A>G
  hgvsp: ENSP00000072516.3:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.416A>G
  hgvsp: ENSP00000387371.1:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.416A>G
  hgvsp: ENSP00000408893.2:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.416A>G
  hgvsp: ENSP00000401132.1:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-8A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.416A>G
  hgvsp: ENSP00000412008.1:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.416A>G
  hgvsp: ENSP00000345829.2:p.Asn139Ser
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn139Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

3-190326850-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326850
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326850
    reference: chr 3
allele count: 7
allele frequency: 5.778342771293193e-5
allele num: 121142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.417T>A
  hgvsp: ENSP00000416296.1:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.417T>A
  hgvsp: ENSP00000401132.1:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.417T>A
  hgvsp: ENSP00000412008.1:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.417T>A
  hgvsp: ENSP00000072516.3:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.417T>A
  hgvsp: ENSP00000412053.2:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.417T>A
  hgvsp: ENSP00000409352.1:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.417T>A
  hgvsp: ENSP00000408893.2:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.417T>A
  hgvsp: ENSP00000314807.3:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.417T>A
  hgvsp: ENSP00000387371.1:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.-7T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.417T>A
  hgvsp: ENSP00000390541.1:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.417T>A
  hgvsp: ENSP00000345829.2:p.Asn139Lys
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn139Lys
num of homozygotes: 1
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-190326857-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326857
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326857
    reference: chr 3
allele count: 4
allele frequency: 3.301855642871293e-5
allele num: 121144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.424A>G
  hgvsp: ENSP00000387371.1:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.424A>G
  hgvsp: ENSP00000390541.1:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.424A>G
  hgvsp: ENSP00000408893.2:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.424A>G
  hgvsp: ENSP00000409352.1:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.424A>G
  hgvsp: ENSP00000345829.2:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.424A>G
  hgvsp: ENSP00000401132.1:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.424A>G
  hgvsp: ENSP00000412053.2:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.1A>G
  hgvsp: ENSP00000391899.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.424A>G
  hgvsp: ENSP00000412008.1:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.424A>G
  hgvsp: ENSP00000072516.3:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.424A>G
  hgvsp: ENSP00000416296.1:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.424A>G
  hgvsp: ENSP00000314807.3:p.Met142Val
  variant of: http://identifiers.org/hgnc/5995
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

3-190326858-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326858
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326858
    reference: chr 3
allele count: 1
allele frequency: 8.254775387561705e-6
allele num: 121142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.425T>A
  hgvsp: ENSP00000401132.1:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.425T>A
  hgvsp: ENSP00000345829.2:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.425T>A
  hgvsp: ENSP00000412053.2:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.425T>A
  hgvsp: ENSP00000408893.2:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.2T>A
  hgvsp: ENSP00000391899.1:p.Met1?
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.425T>A
  hgvsp: ENSP00000314807.3:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.425T>A
  hgvsp: ENSP00000412008.1:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.425T>A
  hgvsp: ENSP00000390541.1:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.425T>A
  hgvsp: ENSP00000409352.1:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.425T>A
  hgvsp: ENSP00000072516.3:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.425T>A
  hgvsp: ENSP00000387371.1:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.425T>A
  hgvsp: ENSP00000416296.1:p.Met142Lys
  variant of: http://identifiers.org/hgnc/5995
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24647
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

3-190326863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326863
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326863
    reference: chr 3
allele count: 2
allele frequency: 1.650900566258894e-5
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.430C>T
  hgvsp: ENSP00000412008.1:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.430C>T
  hgvsp: ENSP00000314807.3:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.430C>T
  hgvsp: ENSP00000345829.2:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.430C>T
  hgvsp: ENSP00000401132.1:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.430C>T
  hgvsp: ENSP00000408893.2:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.7C>T
  hgvsp: ENSP00000391899.1:p.Leu3Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.430C>T
  hgvsp: ENSP00000416296.1:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.430C>T
  hgvsp: ENSP00000072516.3:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.430C>T
  hgvsp: ENSP00000390541.1:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.430C>T
  hgvsp: ENSP00000409352.1:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.430C>T
  hgvsp: ENSP00000387371.1:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.430C>T
  hgvsp: ENSP00000412053.2:p.Leu144Phe
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu144Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

3-190326868-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326868
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326868
    reference: chr 3
allele count: 40
allele frequency: 3.301801132517788e-4
allele num: 121146
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.435A>G
  hgvsp: ENST00000317757.3:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.435A>G
  hgvsp: ENST00000422940.1:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.435A>G
  hgvsp: ENST00000439062.1:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.435A>G
  hgvsp: ENST00000422485.1:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.435A>G
  hgvsp: ENST00000443369.2:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.435A>G
  hgvsp: ENST00000072516.3:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412008
  ensembl transcript: ENST00000453359
  gene symbol: IL1RAP
  hgvsc: ENST00000453359.1:c.435A>G
  hgvsp: ENST00000453359.1:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.435A>G
  hgvsp: ENST00000412504.2:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.12A>G
  hgvsp: ENST00000434491.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.435A>G
  hgvsp: ENST00000342550.2:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.435A>G
  hgvsp: ENST00000413869.1:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.435A>G
  hgvsp: ENST00000447382.1:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
hgvs: p.Pro145Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

3-190326876-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326876
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326876
    reference: chr 3
allele count: 1
allele frequency: 8.255456856982466e-6
allele num: 121132
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.443A>G
  hgvsp: ENSP00000390541.1:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.443A>G
  hgvsp: ENSP00000345829.2:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.443A>G
  hgvsp: ENSP00000314807.3:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.443A>G
  hgvsp: ENSP00000408893.2:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.443A>G
  hgvsp: ENSP00000409352.1:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.443A>G
  hgvsp: ENSP00000412053.2:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.443A>G
  hgvsp: ENSP00000401132.1:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.443A>G
  hgvsp: ENSP00000416296.1:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.443A>G
  hgvsp: ENSP00000072516.3:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.20A>G
  hgvsp: ENSP00000391899.1:p.Lys7Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.443A>G
  hgvsp: ENSP00000387371.1:p.Lys148Arg
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys148Arg
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

3-190326884-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326884
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326884
    reference: chr 3
allele count: 2
allele frequency: 1.651145895251304e-5
allele num: 121128
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.451A>G
  hgvsp: ENSP00000345829.2:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.451A>G
  hgvsp: ENSP00000387371.1:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.451A>G
  hgvsp: ENSP00000072516.3:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.451A>G
  hgvsp: ENSP00000314807.3:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.28A>G
  hgvsp: ENSP00000391899.1:p.Ile10Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.451A>G
  hgvsp: ENSP00000409352.1:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.451A>G
  hgvsp: ENSP00000408893.2:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.451A>G
  hgvsp: ENSP00000401132.1:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.451A>G
  hgvsp: ENSP00000416296.1:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.451A>G
  hgvsp: ENSP00000390541.1:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.451A>G
  hgvsp: ENSP00000412053.2:p.Ile151Val
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile151Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-190326886-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326886
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326886
    reference: chr 3
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.453A>G
  hgvsp: ENSP00000409352.1:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.30A>G
  hgvsp: ENSP00000391899.1:p.Ile10Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.453A>G
  hgvsp: ENSP00000390541.1:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.453A>G
  hgvsp: ENSP00000408893.2:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.453A>G
  hgvsp: ENSP00000387371.1:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.453A>G
  hgvsp: ENSP00000412053.2:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.453A>G
  hgvsp: ENSP00000072516.3:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.453A>G
  hgvsp: ENSP00000345829.2:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.453A>G
  hgvsp: ENSP00000314807.3:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.453A>G
  hgvsp: ENSP00000401132.1:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.453A>G
  hgvsp: ENSP00000416296.1:p.Ile151Met
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile151Met
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

3-190326892-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326892
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326892
    reference: chr 3
allele count: 10
allele frequency: 8.257092842751924e-5
allele num: 121108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.459T>C
  hgvsp: ENST00000422485.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.459T>C
  hgvsp: ENST00000342550.2:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.459T>C
  hgvsp: ENST00000422940.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.459T>C
  hgvsp: ENST00000447382.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.459T>C
  hgvsp: ENST00000412504.2:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.459T>C
  hgvsp: ENST00000317757.3:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.36T>C
  hgvsp: ENST00000434491.1:c.36T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.459T>C
  hgvsp: ENST00000443369.2:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.459T>C
  hgvsp: ENST00000072516.3:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.459T>C
  hgvsp: ENST00000413869.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.459T>C
  hgvsp: ENST00000439062.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: p.Tyr153Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

3-190326900-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326900
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326900
    reference: chr 3
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.467A>G
  hgvsp: ENSP00000412053.2:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.467A>G
  hgvsp: ENSP00000345829.2:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.467A>G
  hgvsp: ENSP00000401132.1:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.467A>G
  hgvsp: ENSP00000408893.2:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.467A>G
  hgvsp: ENSP00000409352.1:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.467A>G
  hgvsp: ENSP00000390541.1:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.467A>G
  hgvsp: ENSP00000416296.1:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.467A>G
  hgvsp: ENSP00000387371.1:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.467A>G
  hgvsp: ENSP00000314807.3:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.467A>G
  hgvsp: ENSP00000072516.3:p.Gln156Arg
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.44A>G
  hgvsp: ENSP00000391899.1:p.Gln15Arg
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln156Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-190326902-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326902
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326902
    reference: chr 3
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.469A>C
  hgvsp: ENST00000072516.3:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.469A>C
  hgvsp: ENST00000413869.1:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.469A>C
  hgvsp: ENST00000412504.2:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.469A>C
  hgvsp: ENST00000447382.1:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.469A>C
  hgvsp: ENST00000317757.3:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.469A>C
  hgvsp: ENST00000422485.1:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.469A>C
  hgvsp: ENST00000443369.2:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.469A>C
  hgvsp: ENST00000439062.1:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.46A>C
  hgvsp: ENST00000434491.1:c.46A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.469A>C
  hgvsp: ENST00000422940.1:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.469A>C
  hgvsp: ENST00000342550.2:c.469A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg157Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-190326916-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326916
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326916
    reference: chr 3
allele count: 2
allele frequency: 1.65305650147122e-5
allele num: 120988
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.483A>G
  hgvsp: ENST00000422940.1:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.483A>G
  hgvsp: ENST00000412504.2:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.483A>G
  hgvsp: ENST00000317757.3:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.483A>G
  hgvsp: ENST00000072516.3:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.483A>G
  hgvsp: ENST00000447382.1:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.483A>G
  hgvsp: ENST00000439062.1:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.483A>G
  hgvsp: ENST00000413869.1:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.483A>G
  hgvsp: ENST00000443369.2:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.483A>G
  hgvsp: ENST00000422485.1:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.483A>G
  hgvsp: ENST00000342550.2:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.60A>G
  hgvsp: ENST00000434491.1:c.60A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro161Pro
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-190326938-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326938
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326938
    reference: chr 3
allele count: 2
allele frequency: 1.658787426391308e-5
allele num: 120570
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.505T>C
  hgvsp: ENSP00000416296.1:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.505T>C
  hgvsp: ENSP00000345829.2:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.505T>C
  hgvsp: ENSP00000401132.1:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.505T>C
  hgvsp: ENSP00000387371.1:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.505T>C
  hgvsp: ENSP00000314807.3:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.505T>C
  hgvsp: ENSP00000408893.2:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.505T>C
  hgvsp: ENSP00000390541.1:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.505T>C
  hgvsp: ENSP00000072516.3:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.82T>C
  hgvsp: ENSP00000391899.1:p.Ser28Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.505T>C
  hgvsp: ENSP00000409352.1:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.505T>C
  hgvsp: ENSP00000412053.2:p.Ser169Pro
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser169Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-190326951-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326951
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326951
    reference: chr 3
allele count: 1
allele frequency: 8.347942232239753e-6
allele num: 119790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.518C>T
  hgvsp: ENSP00000387371.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.518C>T
  hgvsp: ENSP00000416296.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.518C>T
  hgvsp: ENSP00000412053.2:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.518C>T
  hgvsp: ENSP00000314807.3:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.95C>T
  hgvsp: ENSP00000391899.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.518C>T
  hgvsp: ENSP00000401132.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.518C>T
  hgvsp: ENSP00000072516.3:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.518C>T
  hgvsp: ENSP00000408893.2:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.518C>T
  hgvsp: ENSP00000390541.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.518C>T
  hgvsp: ENSP00000409352.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.518C>T
  hgvsp: ENSP00000345829.2:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro173Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-190326952-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326952
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326952
    reference: chr 3
allele count: 4
allele frequency: 3.34079444091805e-5
allele num: 119732
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.519G>A
  hgvsp: ENST00000072516.3:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.519G>A
  hgvsp: ENST00000342550.2:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.519G>A
  hgvsp: ENST00000439062.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.519G>A
  hgvsp: ENST00000317757.3:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.519G>A
  hgvsp: ENST00000412504.2:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.519G>A
  hgvsp: ENST00000422940.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.519G>A
  hgvsp: ENST00000443369.2:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.519G>A
  hgvsp: ENST00000422485.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.519G>A
  hgvsp: ENST00000413869.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.96G>A
  hgvsp: ENST00000434491.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.519G>A
  hgvsp: ENST00000447382.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro173Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

3-190326954-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326954
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326954
    reference: chr 3
allele count: 1
allele frequency: 8.366520531441385e-6
allele num: 119524
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.521C>T
  hgvsp: ENSP00000387371.1:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.98C>T
  hgvsp: ENSP00000391899.1:p.Thr33Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.521C>T
  hgvsp: ENSP00000345829.2:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.521C>T
  hgvsp: ENSP00000390541.1:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.521C>T
  hgvsp: ENSP00000409352.1:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.521C>T
  hgvsp: ENSP00000401132.1:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.521C>T
  hgvsp: ENSP00000416296.1:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.521C>T
  hgvsp: ENSP00000314807.3:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.521C>T
  hgvsp: ENSP00000408893.2:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.521C>T
  hgvsp: ENSP00000412053.2:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.521C>T
  hgvsp: ENSP00000072516.3:p.Thr174Ile
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr174Ile
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-190326957-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326957
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326957
    reference: chr 3
allele count: 29
allele frequency: 2.43333501149541e-4
allele num: 119178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.524T>C
  hgvsp: ENSP00000345829.2:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.524T>C
  hgvsp: ENSP00000072516.3:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.524T>C
  hgvsp: ENSP00000409352.1:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.524T>C
  hgvsp: ENSP00000314807.3:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.524T>C
  hgvsp: ENSP00000390541.1:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.524T>C
  hgvsp: ENSP00000412053.2:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.524T>C
  hgvsp: ENSP00000387371.1:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.524T>C
  hgvsp: ENSP00000408893.2:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.524T>C
  hgvsp: ENSP00000401132.1:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.101T>C
  hgvsp: ENSP00000391899.1:p.Ile34Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.524T>C
  hgvsp: ENSP00000416296.1:p.Ile175Thr
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ile175Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ

3-190326960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326960
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326960
    reference: chr 3
allele count: 1
allele frequency: 8.410570404884859e-6
allele num: 118898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.527C>T
  hgvsp: ENSP00000390541.1:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.527C>T
  hgvsp: ENSP00000416296.1:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.527C>T
  hgvsp: ENSP00000409352.1:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.527C>T
  hgvsp: ENSP00000401132.1:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.527C>T
  hgvsp: ENSP00000072516.3:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.527C>T
  hgvsp: ENSP00000412053.2:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.527C>T
  hgvsp: ENSP00000408893.2:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.527C>T
  hgvsp: ENSP00000387371.1:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.104C>T
  hgvsp: ENSP00000391899.1:p.Thr35Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.527C>T
  hgvsp: ENSP00000314807.3:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.527C>T
  hgvsp: ENSP00000345829.2:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr176Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

3-190326961-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326961
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326961
    reference: chr 3
allele count: 5
allele frequency: 4.211164639692753e-5
allele num: 118732
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.528T>C
  hgvsp: ENST00000317757.3:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.528T>C
  hgvsp: ENST00000443369.2:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.528T>C
  hgvsp: ENST00000422485.1:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.528T>C
  hgvsp: ENST00000072516.3:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.528T>C
  hgvsp: ENST00000413869.1:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.528T>C
  hgvsp: ENST00000439062.1:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.528T>C
  hgvsp: ENST00000412504.2:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.528T>C
  hgvsp: ENST00000342550.2:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.528T>C
  hgvsp: ENST00000447382.1:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.105T>C
  hgvsp: ENST00000434491.1:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.528T>C
  hgvsp: ENST00000422940.1:c.528T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr176Thr
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

3-190326969-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326969
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326969
    reference: chr 3
allele count: 1
allele frequency: 8.491126772522713e-6
allele num: 117770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.536T>C
  hgvsp: ENSP00000416296.1:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.536T>C
  hgvsp: ENSP00000387371.1:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.536T>C
  hgvsp: ENSP00000072516.3:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.113T>C
  hgvsp: ENSP00000391899.1:p.Met38Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.536T>C
  hgvsp: ENSP00000401132.1:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.536T>C
  hgvsp: ENSP00000412053.2:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.536T>C
  hgvsp: ENSP00000314807.3:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.536T>C
  hgvsp: ENSP00000409352.1:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.536T>C
  hgvsp: ENSP00000408893.2:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.536T>C
  hgvsp: ENSP00000390541.1:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.536T>C
  hgvsp: ENSP00000345829.2:p.Met179Thr
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23851
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met179Thr
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

3-190326984-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326984
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326984
    reference: chr 3
allele count: 3
allele frequency: 2.592285358772293e-5
allele num: 115728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+14G>A
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-190326990-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326990
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326990
    reference: chr 3
allele count: 1
allele frequency: 8.712167413009009e-6
allele num: 114782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+20A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+20A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11817
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

3-190326998-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190326998
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190326998
    reference: chr 3
allele count: 1
allele frequency: 8.816631694027614e-6
allele num: 113422
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+28C>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19656
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

3-190327000-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190327000
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190327000
    reference: chr 3
allele count: 4
allele frequency: 3.545407810533407e-5
allele num: 112822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+30C>T
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6238
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

3-190327003-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190327003
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190327003
    reference: chr 3
allele count: 1
allele frequency: 8.941184885821069e-6
allele num: 111842
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+33T>C
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15666
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

3-190327008-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190327008
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190327008
    reference: chr 3
allele count: 1
allele frequency: 8.979723783696414e-6
allele num: 111362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+38G>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+38G>C
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10669
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-190327008-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190327008
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190327008
    reference: chr 3
allele count: 1
allele frequency: 8.979723783696414e-6
allele num: 111362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+38G>T
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10669
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8128
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

3-190327015-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190327015
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190327015
    reference: chr 3
allele count: 5
allele frequency: 4.545041359876375e-5
allele num: 110010
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+45A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11007
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12459
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11182
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4153
  bin: 9.75e1
  variant carriers: 5
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

3-190327020-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190327020
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190327020
    reference: chr 3
allele count: 7576
allele frequency: 7.013516015552676e-2
allele num: 108020
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.114+50A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.537+50A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 3.75e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 9339
  bin: 2.75e1
  variant carriers: 1349
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 2.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 4.25e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 4786
  bin: 3.25e1
  variant carriers: 782
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 8544
  bin: 1.25e1
  variant carriers: 939
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 12451
  bin: 1.75e1
  variant carriers: 1504
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 7.5e0
  variant carriers: 475
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 13087
  bin: 2.25e1
  variant carriers: 1714
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 1.25e1
  variant carriers: 26
num of homozygotes: 381
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

3-190333049-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333049
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333049
    reference: chr 3
allele count: 1
allele frequency: 7.108330963889678e-5
allele num: 14068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-5015A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD

3-190333069-TAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333069
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333067
    reference: chr 3
allele count: 1
allele frequency: 7.087172218284904e-5
allele num: 14110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4994_115-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4994_538-4993delAC
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: TAC
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

3-190333071-C-CTTGTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333071
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333077
    reference: chr 3
allele count: 1
allele frequency: 7.084159818645509e-5
allele num: 14116
alternate allele: CTTGTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

3-190333073-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333073
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333073
    reference: chr 3
allele count: 1
allele frequency: 7.083156254426973e-5
allele num: 14118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4991A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

3-190333125-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333125
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333125
    reference: chr 3
allele count: 10
allele frequency: 7.049203440011279e-4
allele num: 14186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.29T>C
  hgvsp: ENST00000412080.1:c.29T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4939T>C
  variant of: http://identifiers.org/hgnc/5995
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His10His
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

3-190333127-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333127
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333127
    reference: chr 3
allele count: 1
allele frequency: 7.048209754722301e-5
allele num: 14188
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.31T>C
  hgvsp: ENSP00000414102.1:p.Ile11Thr
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4937T>C
  variant of: http://identifiers.org/hgnc/5995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile11Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

3-190333129-GAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333129
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333127
    reference: chr 3
allele count: 1
allele frequency: 7.048209754722301e-5
allele num: 14188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.34_35delAA
  hgvsp: ENSP00000414102.1:p.Glu12GlyfsTer8
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4934_115-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4934_538-4933delAA
  variant of: http://identifiers.org/hgnc/5995
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu12GlyfsTer8
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: GAA
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

3-190333159-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333159
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333159
    reference: chr 3
allele count: 1
allele frequency: 1.445086705202312e-4
allele num: 6920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.47+16T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4905T>A
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

3-190333162-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333162
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333161
    reference: chr 3
allele count: 10100
allele frequency: 7.112676056338029e-1
allele num: 14200
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.47+20delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4901delG
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.25e1
  variant carriers: 608
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 3.75e1
  variant carriers: 486
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 551
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 2.75e1
  variant carriers: 188
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 694
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 746
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 2.5e0
  variant carriers: 282
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.25e1
  variant carriers: 751
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 368
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.25e1
  variant carriers: 339
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.75e1
  variant carriers: 447
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 241
genotype quality: GenotypeQuality
num of homozygotes: 3626
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: TG
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

3-190333168-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333168
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333168
    reference: chr 3
allele count: 1
allele frequency: 7.056167090036692e-5
allele num: 14172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4896T>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.47+25T>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

3-190333171-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190333171
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190333171
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 14168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.47+28T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-4893T>C
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

3-190338016-T-TATGCATG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190338016
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190338023
    reference: chr 3
allele count: 1
allele frequency: 1.478808671734051e-5
allele num: 67622
alternate allele: TATGCATG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-47_115-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.48-47_48-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-47_538-41dupATGCATG
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18937
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

3-190338021-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190338021
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190338021
    reference: chr 3
allele count: 176
allele frequency: 2.638364214187204e-3
allele num: 66708
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000416296
  ensembl transcript: ENST00000413869
  gene symbol: IL1RAP
  hgvsc: ENST00000413869.1:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000409352
  ensembl transcript: ENST00000422485
  gene symbol: IL1RAP
  hgvsc: ENST00000422485.1:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000345829
  ensembl transcript: ENST00000342550
  gene symbol: IL1RAP
  hgvsc: ENST00000342550.2:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000401132
  ensembl transcript: ENST00000439062
  gene symbol: IL1RAP
  hgvsc: ENST00000439062.1:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000072516
  ensembl transcript: ENST00000072516
  gene symbol: IL1RAP
  hgvsc: ENST00000072516.3:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000391899
  ensembl transcript: ENST00000434491
  gene symbol: IL1RAP
  hgvsc: ENST00000434491.1:c.115-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000408893
  ensembl transcript: ENST00000443369
  gene symbol: IL1RAP
  hgvsc: ENST00000443369.2:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000414102
  ensembl transcript: ENST00000412080
  gene symbol: IL1RAP
  hgvsc: ENST00000412080.1:c.48-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000390541
  ensembl transcript: ENST00000447382
  gene symbol: IL1RAP
  hgvsc: ENST00000447382.1:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000314807
  ensembl transcript: ENST00000317757
  gene symbol: IL1RAP
  hgvsc: ENST00000317757.3:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000412053
  ensembl transcript: ENST00000412504
  gene symbol: IL1RAP
  hgvsc: ENST00000412504.2:c.538-43A>G
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5391
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19932
  bin: 1.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18604
  bin: 7.5e0
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 1.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

3-190338023-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190338023
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 190338023
    reference: chr 3
allele count: 3
allele frequency: 4.592633416000735e-5
allele num: 65322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196083
  ensembl protein: ENSP00000387371
  ensembl transcript: ENST00000422940
  gene symbol: IL1RAP
  hgvsc: ENST00000422940.1:c.538-41G>A
  variant of: http://identifiers.org/hgnc/5995
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 50
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8447
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6018
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1772
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5639
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.03777501037775e-4
allele num: 9636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7058
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.238e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.018235e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.623e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.503e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.437e0

QD
type: SiteQuality
SIO_000300: 5.33e0

GenotypeDepth
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6213
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5675
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10444
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1926
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16021
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8538
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 573
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.69704433497537e-5
allele num: 12992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.505573862441282e-5
allele num: 57052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.392130257801899e-4
allele num: 5896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.88e-1

FS
type: SiteQuality
SIO_000300: 1.703e0

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

DP
type: SiteQuality
SIO_000300: 1.010463e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 1.427e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3354
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8833
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5751
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1083
bin: 5.25e1
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GenotypeQuality
all individuals: 530
bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.814947910994954e-5
allele num: 55098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12266
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.16e0

QD
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SIO_000300: 1.315e1

MQ
type: SiteQuality
SIO_000300: 5.89e1

BaseQRankSum
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SIO_000300: -3.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.34e-1

DP
type: SiteQuality
SIO_000300: 9.74927e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

GenotypeDepth
all individuals: 40
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.144426642252232e-4
allele num: 8738
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53126
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5672
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

FS
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SIO_000300: 0.0e0

MQRankSum
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ReadPosRankSum
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VQSLOD
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SIO_000300: 2.4e-2

QD
type: SiteQuality
SIO_000300: 9.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

DP
type: SiteQuality
SIO_000300: 9.62512e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 20

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 191
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GenotypeQuality
all individuals: 490
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5636
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.583670596515925e-3
allele num: 11366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52618
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.019e0

VQSLOD
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SIO_000300: -1.629e0

BaseQRankSum
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SIO_000300: -1.059e0

ReadPosRankSum
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SIO_000300: -7.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ClippingRankSum
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SIO_000300: -4.7e-2

QD
type: SiteQuality
SIO_000300: 1.533e1

MQ
type: SiteQuality
SIO_000300: 5.829e1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

DP
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SIO_000300: 9.61695e5

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 634
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.79058896852602e-5
allele num: 12836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e-2

FS
type: SiteQuality
SIO_000300: 8.557e0

ReadPosRankSum
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SIO_000300: -1.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.298e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

DP
type: SiteQuality
SIO_000300: 1.658696e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 141
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 487
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GenotypeQuality
all individuals: 1553
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64762
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.656748140276302e-4
allele num: 11292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.434e1

BaseQRankSum
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SIO_000300: -3.132e0

FS
type: SiteQuality
SIO_000300: 2.085e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.15e-1

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 3.1e-3

VQSLOD
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SIO_000300: 5.35e-1

MQRankSum
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SIO_000300: -6.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.54e-1

DP
type: SiteQuality
SIO_000300: 1.672114e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542828931128116e-5
allele num: 64816
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.345765892563922e-4
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.720815318097592e-5
allele num: 12952
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Other
type: Population
allele count: 0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 4.13e0

ReadPosRankSum
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DP
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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FS
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VQSLOD
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SIO_000300: 7.52e-1

MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.727975270479135e-5
allele num: 12940
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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African
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Latino
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VQSLOD
type: SiteQuality
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 115
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Latino
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allele count: 2
allele frequency: 1.76772140710624e-4
allele num: 11314
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13106
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64920
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 2.4e-3

ReadPosRankSum
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SIO_000300: 1.08e0

MQRankSum
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SIO_000300: 1.1e0

QD
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SIO_000300: 1.355e1

BaseQRankSum
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SIO_000300: -1.997e0

FS
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.91e-1

DP
type: SiteQuality
SIO_000300: 1.686721e6

GenotypeDepth
all individuals: 700
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variant carriers: 0

GenotypeQuality
all individuals: 1115
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.611508601004719e-5
allele num: 13138
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64942
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.55e-1

ClippingRankSum
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SIO_000300: 2.04e0

MQRankSum
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SIO_000300: 3.6e-1

QD
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 1.690618e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.230466346745417e-4
allele num: 65016
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.273e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 1.697587e6

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7786
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variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530596626565035e-5
allele num: 65334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.536e1

DP
type: SiteQuality
SIO_000300: 1.717417e6

BaseQRankSum
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SIO_000300: -2.885e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.247e0

MQRankSum
type: SiteQuality
SIO_000300: 7.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.31e-1

FS
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528257480820369e-5
allele num: 65434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14242
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 1.18e-2

DP
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SIO_000300: 1.722424e6

ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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ClippingRankSum
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SIO_000300: -1.247e0

BaseQRankSum
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SIO_000300: 5.64e0

QD
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SIO_000300: 1.471e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.51267622678042e-5
allele num: 66108
num of homozygotes: 0

Other
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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ClippingRankSum
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 7.008e0

MQRankSum
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QD
type: SiteQuality
SIO_000300: 8.32e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
type: Population
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South Asian
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European (Non-Finnish)
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allele num: 66182
num of homozygotes: 0

African
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MQ
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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QD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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South Asian
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MQRankSum
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DP
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MQ
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Non-Finnish)
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Latino
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MQRankSum
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QD
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FS
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MQ
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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African
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Latino
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East Asian
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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MQ
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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DP
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VQSLOD
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MQ
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European (Non-Finnish)
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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ReadPosRankSum
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BaseQRankSum
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MQ
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QD
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MQRankSum
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InbreedingCoeff
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FS
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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Latino
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European (Finnish)
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African
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East Asian
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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African
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European (Finnish)
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Other
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East Asian
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DP
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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Other
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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FS
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DP
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QD
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Latino
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VQSLOD
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MQ
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InbreedingCoeff
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BaseQRankSum
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QD
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DP
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FS
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ClippingRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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East Asian
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South Asian
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QD
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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African
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European (Non-Finnish)
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South Asian
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MQ
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InbreedingCoeff
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DP
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VQSLOD
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QD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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East Asian
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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Other
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Latino
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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East Asian
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Latino
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Other
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European (Non-Finnish)
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African
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InbreedingCoeff
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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MQ
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11488
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East Asian
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European (Non-Finnish)
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South Asian
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African
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Other
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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DP
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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Other
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African
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FS
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MQ
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QD
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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Other
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DP
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Latino
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allele frequency: 1.746114894360049e-4
allele num: 11454
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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MQ
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QD
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MQRankSum
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FS
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InbreedingCoeff
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SIO_000300: 3.1e-3

ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.51285930408472e-5
allele num: 66100
num of homozygotes: 0

Latino
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 0.0e0
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East Asian
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QD
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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SIO_000300: 1.750614e6

ClippingRankSum
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SIO_000300: 1.58e0

ReadPosRankSum
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SIO_000300: -2.015e0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
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allele frequency: 8.751969193068441e-5
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.026359592046727e-5
allele num: 66086
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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allele frequency: 6.343567622430856e-5
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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SIO_000300: -2.989e0

QD
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SIO_000300: 1.008e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66028
num of homozygotes: 0

African
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Latino
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allele num: 11416
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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FS
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SIO_000300: 7.76e0

ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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BaseQRankSum
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SIO_000300: -4.268e0

ReadPosRankSum
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SIO_000300: -1.116e0

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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European (Finnish)
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East Asian
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allele frequency: 3.36192905170415e-3
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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FS
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MQRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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allele num: 65844
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South Asian
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European (Finnish)
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East Asian
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African
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ClippingRankSum
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MQ
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MQRankSum
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FS
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BaseQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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Other
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South Asian
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European (Finnish)
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.03951367781155e-5
allele num: 65800
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Latino
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allele num: 11398
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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FS
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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MQ
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528070657987225e-5
allele num: 65442
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.91e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.670999999999999e0

DP
type: SiteQuality
SIO_000300: 1.714656e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.434e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.635638791025404e-5
allele num: 64716
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.667786e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.45e-1

FS
type: SiteQuality
SIO_000300: 4.392e0

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

QD
type: SiteQuality
SIO_000300: 1.09e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.601e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555839064007219e-5
allele num: 64274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

DP
type: SiteQuality
SIO_000300: 1.636127e6

VQSLOD
type: SiteQuality
SIO_000300: 6.53e-1

FS
type: SiteQuality
SIO_000300: 6.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

MQ
type: SiteQuality
SIO_000300: 5.915e1

QD
type: SiteQuality
SIO_000300: 1.24e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12734
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008267795926598e-4
allele num: 9918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.46e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.244e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

DP
type: SiteQuality
SIO_000300: 1.570305e6

MQ
type: SiteQuality
SIO_000300: 5.67e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

QD
type: SiteQuality
SIO_000300: 1.535e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12490
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.57653791130186e-4
allele num: 11184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6488
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 1.621e0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

QD
type: SiteQuality
SIO_000300: 1.396e1

VQSLOD
type: SiteQuality
SIO_000300: 3.08e0

DP
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SIO_000300: 1.537354e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12032
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63258
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.201923076923077e-4
allele num: 8320
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

QD
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MQRankSum
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SIO_000300: 7.39e-1

InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

DP
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SIO_000300: 1.480461e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585137748470342e-5
allele num: 63086
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

FS
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MQ
type: SiteQuality
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QD
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BaseQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585137748470342e-5
allele num: 63086
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.459485e6

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 358
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2904
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4087
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2891
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5732
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5498
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1405
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1950
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1865
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12877
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1393
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4418
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.423213021939136e-4
allele num: 11304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.408555e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.99e-1

FS
type: SiteQuality
SIO_000300: 6.137e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.78e-1

QD
type: SiteQuality
SIO_000300: 1.317e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

GenotypeQuality
all individuals: 1920
bin: 1.75e1
variant carriers: 27

GenotypeQuality
all individuals: 4296
bin: 2.25e1
variant carriers: 43

GenotypeQuality
all individuals: 2851
bin: 4.25e1
variant carriers: 39

GenotypeQuality
all individuals: 4334
bin: 5.25e1
variant carriers: 56

GenotypeQuality
all individuals: 2593
bin: 2.75e1
variant carriers: 25

GenotypeQuality
all individuals: 1257
bin: 8.25e1
variant carriers: 95

GenotypeQuality
all individuals: 749
bin: 9.25e1
variant carriers: 79

GenotypeQuality
all individuals: 6110
bin: 6.25e1
variant carriers: 56

GenotypeQuality
all individuals: 1250
bin: 7.5e0
variant carriers: 23

GenotypeQuality
all individuals: 572
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 3092
bin: 6.75e1
variant carriers: 55

GenotypeQuality
all individuals: 616
bin: 8.75e1
variant carriers: 107

GenotypeQuality
all individuals: 5218
bin: 3.75e1
variant carriers: 32

GenotypeQuality
all individuals: 10447
bin: 9.75e1
variant carriers: 6808

GenotypeQuality
all individuals: 4906
bin: 3.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1688
bin: 7.75e1
variant carriers: 79

GenotypeQuality
all individuals: 1316
bin: 7.25e1
variant carriers: 44

GenotypeQuality
all individuals: 5048
bin: 4.75e1
variant carriers: 60

GenotypeQuality
all individuals: 1356
bin: 5.75e1
variant carriers: 46

African
type: Population
allele count: 130
allele frequency: 1.370729649936736e-2
allele num: 9484
num of homozygotes: 1

South Asian
type: Population
allele count: 983
allele frequency: 9.033265943760338e-2
allele num: 10882
num of homozygotes: 46

Other
type: Population
allele count: 42
allele frequency: 5.185185185185185e-2
allele num: 810
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 332
allele frequency: 5.169729056368733e-2
allele num: 6422
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 3996
allele frequency: 6.497560975609756e-2
allele num: 61500
num of homozygotes: 118

Latino
type: Population
allele count: 2090
allele frequency: 1.929468242245199e-1
allele num: 10832
num of homozygotes: 205

East Asian
type: Population
allele count: 3
allele frequency: 3.708281829419036e-4
allele num: 8090
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

DP
type: SiteQuality
SIO_000300: 1.392817e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.83e-2

QD
type: SiteQuality
SIO_000300: 1.73e1

GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 483
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2871
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.321702352630188e-4
allele num: 7566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.09e-2

DP
type: SiteQuality
SIO_000300: 2.46693e5

QD
type: SiteQuality
SIO_000300: 1.185e1

MQ
type: SiteQuality
SIO_000300: 5.934e1

VQSLOD
type: SiteQuality
SIO_000300: 7.199999999999999e-2

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.316829075585989e-4
allele num: 7594
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.86e0

VQSLOD
type: SiteQuality
SIO_000300: -1.354e0

FS
type: SiteQuality
SIO_000300: 2.783e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

QD
type: SiteQuality
SIO_000300: 2.366e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.58e-2

MQ
type: SiteQuality
SIO_000300: 4.517e1

DP
type: SiteQuality
SIO_000300: 2.51971e5

GenotypeQuality
all individuals: 406
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3833
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.316829075585989e-4
allele num: 7594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

DP
type: SiteQuality
SIO_000300: 2.52733e5

MQRankSum
type: SiteQuality
SIO_000300: -4.045e0

QD
type: SiteQuality
SIO_000300: 1.223e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.519e0

MQ
type: SiteQuality
SIO_000300: 4.41e1

FS
type: SiteQuality
SIO_000300: 2.844e0

VQSLOD
type: SiteQuality
SIO_000300: 4.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.023e0

GenotypeQuality
all individuals: 384
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3810
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.317175974710221e-4
allele num: 7592
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.55e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.31e-1

DP
type: SiteQuality
SIO_000300: 2.53165e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.044e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.62e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeDepth
all individuals: 772
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 5.025125628140704e-3
allele num: 1592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.186721991701245e-4
allele num: 3856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.42e-2

MQ
type: SiteQuality
SIO_000300: 6.012e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.07e0

MQRankSum
type: SiteQuality
SIO_000300: -6.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.637e1

DP
type: SiteQuality
SIO_000300: 2.56123e5

VQSLOD
type: SiteQuality
SIO_000300: -1.326e-1

GenotypeDepth
all individuals: 59
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 430
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.313715186547556e-4
allele num: 7612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.850000000000001e-1

FS
type: SiteQuality
SIO_000300: 7.403e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 2.5587e5

ClippingRankSum
type: SiteQuality
SIO_000300: -8.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

QD
type: SiteQuality
SIO_000300: 7.62e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

GenotypeDepth
all individuals: 111
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
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GenotypeQuality
all individuals: 1089
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3995
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.792114695340502e-3
allele num: 558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.159999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.692e0

DP
type: SiteQuality
SIO_000300: 2.55942e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.68e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.275e1

GenotypeDepth
all individuals: 297
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
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GenotypeQuality
all individuals: 476
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GenotypeQuality
all individuals: 906
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 2.5e0
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.541942043721403e-4
allele num: 3934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.517e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

FS
type: SiteQuality
SIO_000300: 5.022e0

VQSLOD
type: SiteQuality
SIO_000300: 5.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

DP
type: SiteQuality
SIO_000300: 3.53242e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 431
bin: 9.75e1
variant carriers: 425

GenotypeQuality
all individuals: 103
bin: 7.75e1
variant carriers: 32

GenotypeQuality
all individuals: 68
bin: 7.25e1
variant carriers: 22

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 71

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 56

GenotypeQuality
all individuals: 452
bin: 7.5e0
variant carriers: 200

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6324
bin: 9.75e1
variant carriers: 6231

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 18

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 24

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 64

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 154
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 8.75e1
variant carriers: 44

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 28

GenotypeQuality
all individuals: 113
bin: 6.75e1
variant carriers: 19

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 233
bin: 6.25e1
variant carriers: 27

GenotypeQuality
all individuals: 68
bin: 8.25e1
variant carriers: 26

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 9

East Asian
type: Population
allele count: 168
allele frequency: 8.484848484848485e-1
allele num: 198
num of homozygotes: 72

Other
type: Population
allele count: 127
allele frequency: 6.902173913043478e-1
allele num: 184
num of homozygotes: 46

European (Finnish)
type: Population
allele count: 1308
allele frequency: 8.21608040201005e-1
allele num: 1592
num of homozygotes: 542

Latino
type: Population
allele count: 117
allele frequency: 6.223404255319149e-1
allele num: 188
num of homozygotes: 37

African
type: Population
allele count: 325
allele frequency: 5.824372759856631e-1
allele num: 558
num of homozygotes: 94

European (Non-Finnish)
type: Population
allele count: 2768
allele frequency: 7.163561076604554e-1
allele num: 3864
num of homozygotes: 998

South Asian
type: Population
allele count: 5287
allele frequency: 6.941964285714286e-1
allele num: 7616
num of homozygotes: 1837

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.146e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

DP
type: SiteQuality
SIO_000300: 4.00611e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.18e-1

QD
type: SiteQuality
SIO_000300: 2.884e1

MQ
type: SiteQuality
SIO_000300: 6.06e1

GenotypeDepth
all individuals: 120
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2410
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.600104004160167e-4
allele num: 3846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.418e1

FS
type: SiteQuality
SIO_000300: 8.15e0

DP
type: SiteQuality
SIO_000300: 2.96283e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQ
type: SiteQuality
SIO_000300: 6.043e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.032e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

GenotypeDepth
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 571
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variant carriers: 0

GenotypeQuality
all individuals: 227
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GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1499
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
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GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2409
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.08e-2

DP
type: SiteQuality
SIO_000300: 2.94983e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.45e1

GenotypeDepth
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 52
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GenotypeQuality
all individuals: 9624
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GenotypeQuality
all individuals: 3587
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variant carriers: 0

GenotypeQuality
all individuals: 175
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variant carriers: 1

GenotypeQuality
all individuals: 289
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GenotypeQuality
all individuals: 2107
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
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GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
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GenotypeQuality
all individuals: 3019
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
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GenotypeQuality
all individuals: 169
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GenotypeQuality
all individuals: 117
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29570
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5282
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.261352169525732e-4
allele num: 7928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5038
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.99e-2

QD
type: SiteQuality
SIO_000300: 4.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 5.058e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.461e0

MQRankSum
type: SiteQuality
SIO_000300: -2.793e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e-1

DP
type: SiteQuality
SIO_000300: 7.36297e5

GenotypeDepth
all individuals: 584
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 179
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 509
bin: 6.75e1
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GenotypeQuality
all individuals: 117
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variant carriers: 8

GenotypeQuality
all individuals: 1001
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variant carriers: 1

GenotypeQuality
all individuals: 3573
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variant carriers: 2

GenotypeQuality
all individuals: 300
bin: 4.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 251
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variant carriers: 2

GenotypeQuality
all individuals: 2957
bin: 1.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1327
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3436
bin: 3.25e1
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GenotypeQuality
all individuals: 2825
bin: 1.25e1
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GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 11581
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 136
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 122
bin: 8.25e1
variant carriers: 9

GenotypeQuality
all individuals: 151
bin: 7.75e1
variant carriers: 9

GenotypeQuality
all individuals: 344
bin: 9.75e1
variant carriers: 178

GenotypeQuality
all individuals: 27691
bin: 2.25e1
variant carriers: 2

Other
type: Population
allele count: 1
allele frequency: 1.865671641791045e-3
allele num: 536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34786
num of homozygotes: 0

African
type: Population
allele count: 164
allele frequency: 3.109594235874099e-2
allele num: 5274
num of homozygotes: 1

Latino
type: Population
allele count: 8
allele frequency: 1.011378002528445e-3
allele num: 7910
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.992808629644426e-4
allele num: 5006
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

DP
type: SiteQuality
SIO_000300: 7.50849e5

VQSLOD
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 6.083e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.267e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.03e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1