1-144917784-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917784
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917784
    reference: chr 1
allele count: 21
allele frequency: 1.738353034667726e-4
allele num: 120804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+35T>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+35T>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

1-144917786-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917786
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917786
    reference: chr 1
allele count: 1
allele frequency: 8.27787159365584e-6
allele num: 120804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+33G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+33G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-144917787-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917787
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917787
    reference: chr 1
allele count: 2
allele frequency: 1.655738790648387e-5
allele num: 120792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+32G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+32G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40446
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-144917788-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917788
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917788
    reference: chr 1
allele count: 2
allele frequency: 1.655519502019734e-5
allele num: 120808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+31T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+31T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

1-144917789-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917789
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917789
    reference: chr 1
allele count: 6
allele frequency: 4.966558506059201e-5
allele num: 120808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+30A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+30A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40446
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

1-144917791-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917791
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917791
    reference: chr 1
allele count: 1
allele frequency: 8.277734549608463e-6
allele num: 120806
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+28C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+28C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40446
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

1-144917797-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917797
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917797
    reference: chr 1
allele count: 1
allele frequency: 8.274994621253496e-6
allele num: 120846
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+22A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+22A>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-144917797-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917797
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917797
    reference: chr 1
allele count: 1
allele frequency: 8.274994621253496e-6
allele num: 120846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+22A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+22A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40448
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-144917801-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917801
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917801
    reference: chr 1
allele count: 1
allele frequency: 8.272119647938589e-6
allele num: 120888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+18G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+18G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD

1-144917801-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917801
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917801
    reference: chr 1
allele count: 1
allele frequency: 8.272119647938589e-6
allele num: 120888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+18G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+18G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-144917802-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917802
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917802
    reference: chr 1
allele count: 4
allele frequency: 3.308300526019784e-5
allele num: 120908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+17C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+17C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

1-144917809-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917809
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917809
    reference: chr 1
allele count: 6206
allele frequency: 5.129773516283683e-2
allele num: 120980
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+10A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+10A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 8.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 41805
  bin: 9.75e1
  variant carriers: 5646
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 3.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 6.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 6.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 9.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

1-144917812-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917812
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917812
    reference: chr 1
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+7A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+7A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41817
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1467+7A>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/1-144917815-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917815
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917815
    reference: chr 1
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+4T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+4T>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1467+4T>G
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-144917815-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917815
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917815
    reference: chr 1
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1956+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1467+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.293+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1467+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1467+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1878+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.342+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.828+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.504+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1878+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1956+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1665+4T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1467+4T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41817
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1467+4T>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/1-144917823-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917823
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917823
    reference: chr 1
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1874T>G
  hgvsp: ENSP00000435654.1:p.Leu625Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.500T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.338T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1463T>G
  hgvsp: ENSP00000358360.3:p.Leu488Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1463T>G
  hgvsp: ENSP00000358357.3:p.Leu488Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.824T>G
  hgvsp: ENSP00000436791.1:p.Leu275Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1952T>G
  hgvsp: ENSP00000433392.1:p.Leu651Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1952T>G
  hgvsp: ENSP00000316434.9:p.Leu651Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1874T>G
  hgvsp: ENSP00000358366.4:p.Leu625Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1463T>G
  hgvsp: ENSP00000358363.4:p.Leu488Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1463T>G
  hgvsp: ENSP00000358355.3:p.Leu488Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.289T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1661T>G
  hgvsp: ENSP00000327209.9:p.Leu554Arg
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu488Arg
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-144917824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917824
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917824
    reference: chr 1
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.337C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.288C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1873C>T
  hgvsp: ENST00000530740.1:c.1873C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1873C>T
  hgvsp: ENST00000369359.4:c.1873C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1462C>T
  hgvsp: ENST00000369354.3:c.1462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.499C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.823C>T
  hgvsp: ENST00000479408.2:c.823C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1462C>T
  hgvsp: ENST00000369351.3:c.1462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1462C>T
  hgvsp: ENST00000369356.4:c.1462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1462C>T
  hgvsp: ENST00000369349.3:c.1462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1951C>T
  hgvsp: ENST00000529945.1:c.1951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1951C>T
  hgvsp: ENST00000313431.9:c.1951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1660C>T
  hgvsp: ENST00000313382.9:c.1660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu488Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-144917827-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917827
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917827
    reference: chr 1
allele count: 16
allele frequency: 1.318739285243307e-4
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.496G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1459G>T
  hgvsp: ENSP00000358355.3:p.Ala487Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1657G>T
  hgvsp: ENSP00000327209.9:p.Ala553Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1948G>T
  hgvsp: ENSP00000433392.1:p.Ala650Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1870G>T
  hgvsp: ENSP00000435654.1:p.Ala624Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1948G>T
  hgvsp: ENSP00000316434.9:p.Ala650Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1870G>T
  hgvsp: ENSP00000358366.4:p.Ala624Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1459G>T
  hgvsp: ENSP00000358360.3:p.Ala487Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.820G>T
  hgvsp: ENSP00000436791.1:p.Ala274Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.334G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1459G>T
  hgvsp: ENSP00000358357.3:p.Ala487Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.285G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1459G>T
  hgvsp: ENSP00000358363.4:p.Ala487Ser
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala487Ser
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/1-144917827-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917827
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917826
    reference: chr 1
allele count: 35803
allele frequency: 2.950926414347884e-1
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1458delT
  hgvsp: ENSP00000358360.3:p.Ala487LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1947delT
  hgvsp: ENSP00000433392.1:p.Ala650LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1869delT
  hgvsp: ENSP00000358366.4:p.Ala624LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1458delT
  hgvsp: ENSP00000358363.4:p.Ala487LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1869delT
  hgvsp: ENSP00000435654.1:p.Ala624LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1656delT
  hgvsp: ENSP00000327209.9:p.Ala553LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1947delT
  hgvsp: ENSP00000316434.9:p.Ala650LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.495delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.284delT
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1458delT
  hgvsp: ENSP00000358355.3:p.Ala487LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.819delT
  hgvsp: ENSP00000436791.1:p.Ala274LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1458delT
  hgvsp: ENSP00000358357.3:p.Ala487LeufsTer6
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.333delT
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: frameshift
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 49794
  bin: 9.75e1
  variant carriers: 33035
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 2.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 8.25e1
  variant carriers: 303
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.25e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.25e1
  variant carriers: 270
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 88
genotype quality: GenotypeQuality
hgvs: p.Ala487LeufsTer6
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: CA
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/1-144917829-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917829
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917829
    reference: chr 1
allele count: 1
allele frequency: 2.011343980047468e-5
allele num: 49718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1457T>G
  hgvsp: ENSP00000358360.3:p.Val486Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1868T>G
  hgvsp: ENSP00000435654.1:p.Val623Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.818T>G
  hgvsp: ENSP00000436791.1:p.Val273Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1457T>G
  hgvsp: ENSP00000358357.3:p.Val486Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.283T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1946T>G
  hgvsp: ENSP00000433392.1:p.Val649Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1457T>G
  hgvsp: ENSP00000358355.3:p.Val486Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1868T>G
  hgvsp: ENSP00000358366.4:p.Val623Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.332T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1946T>G
  hgvsp: ENSP00000316434.9:p.Val649Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1655T>G
  hgvsp: ENSP00000327209.9:p.Val552Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.494T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1457T>G
  hgvsp: ENSP00000358363.4:p.Val486Gly
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val486Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

1-144917833-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917833
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917833
    reference: chr 1
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1453G>A
  hgvsp: ENSP00000358363.4:p.Ala485Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1453G>A
  hgvsp: ENSP00000358355.3:p.Ala485Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1942G>A
  hgvsp: ENSP00000433392.1:p.Ala648Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1651G>A
  hgvsp: ENSP00000327209.9:p.Ala551Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.279G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1864G>A
  hgvsp: ENSP00000435654.1:p.Ala622Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1942G>A
  hgvsp: ENSP00000316434.9:p.Ala648Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1453G>A
  hgvsp: ENSP00000358360.3:p.Ala485Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1864G>A
  hgvsp: ENSP00000358366.4:p.Ala622Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.490G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1453G>A
  hgvsp: ENSP00000358357.3:p.Ala485Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.328G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.814G>A
  hgvsp: ENSP00000436791.1:p.Ala272Thr
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala485Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

1-144917834-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917834
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917834
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1863A>G
  hgvsp: ENST00000530740.1:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1452A>G
  hgvsp: ENST00000369354.3:c.1452A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.489A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1452A>G
  hgvsp: ENST00000369351.3:c.1452A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1452A>G
  hgvsp: ENST00000369349.3:c.1452A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1941A>G
  hgvsp: ENST00000529945.1:c.1941A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1650A>G
  hgvsp: ENST00000313382.9:c.1650A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.278A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.813A>G
  hgvsp: ENST00000479408.2:c.813A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1452A>G
  hgvsp: ENST00000369356.4:c.1452A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1863A>G
  hgvsp: ENST00000369359.4:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.327A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1941A>G
  hgvsp: ENST00000313431.9:c.1941A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys484Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD

1-144917841-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917841
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917841
    reference: chr 1
allele count: 60702
allele frequency: 5.0e-1
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1856A>G
  hgvsp: ENSP00000358366.4:p.His619Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1445A>G
  hgvsp: ENSP00000358355.3:p.His482Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1445A>G
  hgvsp: ENSP00000358357.3:p.His482Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.806A>G
  hgvsp: ENSP00000436791.1:p.His269Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1445A>G
  hgvsp: ENSP00000358363.4:p.His482Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1934A>G
  hgvsp: ENSP00000433392.1:p.His645Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.271A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1934A>G
  hgvsp: ENSP00000316434.9:p.His645Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1856A>G
  hgvsp: ENSP00000435654.1:p.His619Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1445A>G
  hgvsp: ENSP00000358360.3:p.His482Arg
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.482A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.320A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1643A>G
  hgvsp: ENSP00000327209.9:p.His548Arg
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.His482Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD

1-144917842-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917842
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917842
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1855C>T
  hgvsp: ENSP00000358366.4:p.His619Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1444C>T
  hgvsp: ENSP00000358363.4:p.His482Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1444C>T
  hgvsp: ENSP00000358360.3:p.His482Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.805C>T
  hgvsp: ENSP00000436791.1:p.His269Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1933C>T
  hgvsp: ENSP00000433392.1:p.His645Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1642C>T
  hgvsp: ENSP00000327209.9:p.His548Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1855C>T
  hgvsp: ENSP00000435654.1:p.His619Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1444C>T
  hgvsp: ENSP00000358357.3:p.His482Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1444C>T
  hgvsp: ENSP00000358355.3:p.His482Tyr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.270C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.481C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.319C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1933C>T
  hgvsp: ENSP00000316434.9:p.His645Tyr
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22315
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3749
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His482Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

1-144917842-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917842
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917842
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1855C>A
  hgvsp: ENSP00000358366.4:p.His619Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.319C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.805C>A
  hgvsp: ENSP00000436791.1:p.His269Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1933C>A
  hgvsp: ENSP00000316434.9:p.His645Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1444C>A
  hgvsp: ENSP00000358355.3:p.His482Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1642C>A
  hgvsp: ENSP00000327209.9:p.His548Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1444C>A
  hgvsp: ENSP00000358360.3:p.His482Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1444C>A
  hgvsp: ENSP00000358363.4:p.His482Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1444C>A
  hgvsp: ENSP00000358357.3:p.His482Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1855C>A
  hgvsp: ENSP00000435654.1:p.His619Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1933C>A
  hgvsp: ENSP00000433392.1:p.His645Asn
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.270C>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.481C>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3749
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His482Asn
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

1-144917846-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917846
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917846
    reference: chr 1
allele count: 12
allele frequency: 9.883864591055103e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1440A>T
  hgvsp: ENST00000369349.3:c.1440A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1440A>T
  hgvsp: ENST00000369354.3:c.1440A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1440A>T
  hgvsp: ENST00000369351.3:c.1440A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1440A>T
  hgvsp: ENST00000369356.4:c.1440A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.315A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1851A>T
  hgvsp: ENST00000369359.4:c.1851A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1851A>T
  hgvsp: ENST00000530740.1:c.1851A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.477A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1929A>T
  hgvsp: ENST00000313431.9:c.1929A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.266A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1638A>T
  hgvsp: ENST00000313382.9:c.1638A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1929A>T
  hgvsp: ENST00000529945.1:c.1929A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.801A>T
  hgvsp: ENST00000479408.2:c.801A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22315
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg480Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

1-144917847-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917847
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917847
    reference: chr 1
allele count: 7
allele frequency: 5.765587678115476e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1637G>A
  hgvsp: ENSP00000327209.9:p.Arg546Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1439G>A
  hgvsp: ENSP00000358360.3:p.Arg480Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1439G>A
  hgvsp: ENSP00000358363.4:p.Arg480Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.265G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1439G>A
  hgvsp: ENSP00000358357.3:p.Arg480Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.800G>A
  hgvsp: ENSP00000436791.1:p.Arg267Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1928G>A
  hgvsp: ENSP00000316434.9:p.Arg643Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.476G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1439G>A
  hgvsp: ENSP00000358355.3:p.Arg480Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1850G>A
  hgvsp: ENSP00000358366.4:p.Arg617Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1928G>A
  hgvsp: ENSP00000433392.1:p.Arg643Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1850G>A
  hgvsp: ENSP00000435654.1:p.Arg617Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.314G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3749
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22306
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg480Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

1-144917848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917848
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917848
    reference: chr 1
allele count: 46
allele frequency: 3.788877174486031e-4
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1927C>T
  hgvsp: ENSP00000316434.9:p.Arg643Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1849C>T
  hgvsp: ENSP00000358366.4:p.Arg617Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1438C>T
  hgvsp: ENSP00000358357.3:p.Arg480Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.799C>T
  hgvsp: ENSP00000436791.1:p.Arg267Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1636C>T
  hgvsp: ENSP00000327209.9:p.Arg546Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1849C>T
  hgvsp: ENSP00000435654.1:p.Arg617Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1438C>T
  hgvsp: ENSP00000358360.3:p.Arg480Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.475C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1438C>T
  hgvsp: ENSP00000358363.4:p.Arg480Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1927C>T
  hgvsp: ENSP00000433392.1:p.Arg643Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.264C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.313C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1438C>T
  hgvsp: ENSP00000358355.3:p.Arg480Ter
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3749
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22303
  bin: 9.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg480Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-144917849-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917849
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917848
    reference: chr 1
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.311delA
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1436delA
  hgvsp: ENSP00000358357.3:p.Gln479ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1925delA
  hgvsp: ENSP00000433392.1:p.Gln642ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1436delA
  hgvsp: ENSP00000358355.3:p.Gln479ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1436delA
  hgvsp: ENSP00000358363.4:p.Gln479ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.473delA
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.262delA
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1436delA
  hgvsp: ENSP00000358360.3:p.Gln479ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1634delA
  hgvsp: ENSP00000327209.9:p.Gln545ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1925delA
  hgvsp: ENSP00000316434.9:p.Gln642ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.797delA
  hgvsp: ENSP00000436791.1:p.Gln266ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1847delA
  hgvsp: ENSP00000358366.4:p.Gln616ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1847delA
  hgvsp: ENSP00000435654.1:p.Gln616ArgfsTer14
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22270
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln479ArgfsTer14
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: CT
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-144917851-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917851
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917851
    reference: chr 1
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1435C>G
  hgvsp: ENSP00000358363.4:p.Gln479Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1435C>G
  hgvsp: ENSP00000358360.3:p.Gln479Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1435C>G
  hgvsp: ENSP00000358355.3:p.Gln479Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.310C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1924C>G
  hgvsp: ENSP00000316434.9:p.Gln642Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1846C>G
  hgvsp: ENSP00000358366.4:p.Gln616Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1846C>G
  hgvsp: ENSP00000435654.1:p.Gln616Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1435C>G
  hgvsp: ENSP00000358357.3:p.Gln479Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.796C>G
  hgvsp: ENSP00000436791.1:p.Gln266Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1633C>G
  hgvsp: ENSP00000327209.9:p.Gln545Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1924C>G
  hgvsp: ENSP00000433392.1:p.Gln642Glu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.472C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.261C>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln479Glu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

1-144917853-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917853
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917853
    reference: chr 1
allele count: 19
allele frequency: 1.564945226917058e-4
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1844G>A
  hgvsp: ENSP00000358366.4:p.Arg615His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1433G>A
  hgvsp: ENSP00000358357.3:p.Arg478His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.794G>A
  hgvsp: ENSP00000436791.1:p.Arg265His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1922G>A
  hgvsp: ENSP00000316434.9:p.Arg641His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.259G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1433G>A
  hgvsp: ENSP00000358360.3:p.Arg478His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.308G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1433G>A
  hgvsp: ENSP00000358355.3:p.Arg478His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1433G>A
  hgvsp: ENSP00000358363.4:p.Arg478His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.470G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1922G>A
  hgvsp: ENSP00000433392.1:p.Arg641His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1844G>A
  hgvsp: ENSP00000435654.1:p.Arg615His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1631G>A
  hgvsp: ENSP00000327209.9:p.Arg544His
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg478His
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/1-144917853-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917853
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917853
    reference: chr 1
allele count: 3
allele frequency: 2.470966147763776e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1433G>T
  hgvsp: ENSP00000358357.3:p.Arg478Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.794G>T
  hgvsp: ENSP00000436791.1:p.Arg265Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1433G>T
  hgvsp: ENSP00000358360.3:p.Arg478Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1433G>T
  hgvsp: ENSP00000358363.4:p.Arg478Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.259G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.470G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1631G>T
  hgvsp: ENSP00000327209.9:p.Arg544Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1922G>T
  hgvsp: ENSP00000316434.9:p.Arg641Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1922G>T
  hgvsp: ENSP00000433392.1:p.Arg641Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1433G>T
  hgvsp: ENSP00000358355.3:p.Arg478Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1844G>T
  hgvsp: ENSP00000435654.1:p.Arg615Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1844G>T
  hgvsp: ENSP00000358366.4:p.Arg615Leu
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.308G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg478Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS

1-144917854-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917854
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917854
    reference: chr 1
allele count: 4
allele frequency: 3.294621530351701e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.793C>T
  hgvsp: ENSP00000436791.1:p.Arg265Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1432C>T
  hgvsp: ENSP00000358357.3:p.Arg478Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1630C>T
  hgvsp: ENSP00000327209.9:p.Arg544Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1432C>T
  hgvsp: ENSP00000358355.3:p.Arg478Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1921C>T
  hgvsp: ENSP00000433392.1:p.Arg641Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1921C>T
  hgvsp: ENSP00000316434.9:p.Arg641Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1432C>T
  hgvsp: ENSP00000358360.3:p.Arg478Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1843C>T
  hgvsp: ENSP00000435654.1:p.Arg615Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.469C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1432C>T
  hgvsp: ENSP00000358363.4:p.Arg478Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1843C>T
  hgvsp: ENSP00000358366.4:p.Arg615Cys
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.307C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.258C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg478Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

1-144917864-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917864
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917864
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1911T>C
  hgvsp: ENST00000313431.9:c.1911T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1620T>C
  hgvsp: ENST00000313382.9:c.1620T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1422T>C
  hgvsp: ENST00000369349.3:c.1422T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1422T>C
  hgvsp: ENST00000369351.3:c.1422T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1833T>C
  hgvsp: ENST00000369359.4:c.1833T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1911T>C
  hgvsp: ENST00000529945.1:c.1911T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.783T>C
  hgvsp: ENST00000479408.2:c.783T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1422T>C
  hgvsp: ENST00000369356.4:c.1422T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1422T>C
  hgvsp: ENST00000369354.3:c.1422T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.248T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1833T>C
  hgvsp: ENST00000530740.1:c.1833T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.459T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.297T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu474Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-144917871-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917871
    reference: chr 1
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1613T>C
  hgvsp: ENSP00000327209.9:p.Met538Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.241T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.452T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1415T>C
  hgvsp: ENSP00000358357.3:p.Met472Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1904T>C
  hgvsp: ENSP00000316434.9:p.Met635Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.776T>C
  hgvsp: ENSP00000436791.1:p.Met259Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1826T>C
  hgvsp: ENSP00000358366.4:p.Met609Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1415T>C
  hgvsp: ENSP00000358363.4:p.Met472Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1826T>C
  hgvsp: ENSP00000435654.1:p.Met609Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.290T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1415T>C
  hgvsp: ENSP00000358355.3:p.Met472Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1904T>C
  hgvsp: ENSP00000433392.1:p.Met635Thr
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1415T>C
  hgvsp: ENSP00000358360.3:p.Met472Thr
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met472Thr
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

1-144917873-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917873
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1902A>T
  hgvsp: ENSP00000316434.9:p.Glu634Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1413A>T
  hgvsp: ENSP00000358355.3:p.Glu471Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1611A>T
  hgvsp: ENSP00000327209.9:p.Glu537Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1413A>T
  hgvsp: ENSP00000358360.3:p.Glu471Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.288A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.774A>T
  hgvsp: ENSP00000436791.1:p.Glu258Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1413A>T
  hgvsp: ENSP00000358363.4:p.Glu471Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1824A>T
  hgvsp: ENSP00000435654.1:p.Glu608Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1413A>T
  hgvsp: ENSP00000358357.3:p.Glu471Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.450A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1902A>T
  hgvsp: ENSP00000433392.1:p.Glu634Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.239A>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1824A>T
  hgvsp: ENSP00000358366.4:p.Glu608Asp
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu471Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-144917875-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917875
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917875
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1411G>T
  hgvsp: ENSP00000358357.3:p.Glu471Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1822G>T
  hgvsp: ENSP00000435654.1:p.Glu608Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.772G>T
  hgvsp: ENSP00000436791.1:p.Glu258Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1822G>T
  hgvsp: ENSP00000358366.4:p.Glu608Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1900G>T
  hgvsp: ENSP00000316434.9:p.Glu634Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.286G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.237G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1411G>T
  hgvsp: ENSP00000358360.3:p.Glu471Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1900G>T
  hgvsp: ENSP00000433392.1:p.Glu634Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1411G>T
  hgvsp: ENSP00000358355.3:p.Glu471Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1411G>T
  hgvsp: ENSP00000358363.4:p.Glu471Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1609G>T
  hgvsp: ENSP00000327209.9:p.Glu537Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.448G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu471Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-144917876-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917876
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917876
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1608T>C
  hgvsp: ENST00000313382.9:c.1608T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1899T>C
  hgvsp: ENST00000313431.9:c.1899T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1410T>C
  hgvsp: ENST00000369349.3:c.1410T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.285T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1410T>C
  hgvsp: ENST00000369351.3:c.1410T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1410T>C
  hgvsp: ENST00000369356.4:c.1410T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1410T>C
  hgvsp: ENST00000369354.3:c.1410T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1899T>C
  hgvsp: ENST00000529945.1:c.1899T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1821T>C
  hgvsp: ENST00000369359.4:c.1821T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1821T>C
  hgvsp: ENST00000530740.1:c.1821T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.236T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.771T>C
  hgvsp: ENST00000479408.2:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.447T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn470Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-144917877-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917877
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1898A>G
  hgvsp: ENSP00000433392.1:p.Asn633Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1409A>G
  hgvsp: ENSP00000358355.3:p.Asn470Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.446A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1409A>G
  hgvsp: ENSP00000358357.3:p.Asn470Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1820A>G
  hgvsp: ENSP00000435654.1:p.Asn607Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1607A>G
  hgvsp: ENSP00000327209.9:p.Asn536Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1409A>G
  hgvsp: ENSP00000358360.3:p.Asn470Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1898A>G
  hgvsp: ENSP00000316434.9:p.Asn633Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1820A>G
  hgvsp: ENSP00000358366.4:p.Asn607Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1409A>G
  hgvsp: ENSP00000358363.4:p.Asn470Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.770A>G
  hgvsp: ENSP00000436791.1:p.Asn257Ser
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.235A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.284A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22243
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn470Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-144917882-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917882
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917882
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1404A>C
  hgvsp: ENSP00000358357.3:p.Glu468Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.441A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1815A>C
  hgvsp: ENSP00000435654.1:p.Glu605Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.230A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1602A>C
  hgvsp: ENSP00000327209.9:p.Glu534Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1404A>C
  hgvsp: ENSP00000358355.3:p.Glu468Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1893A>C
  hgvsp: ENSP00000433392.1:p.Glu631Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1404A>C
  hgvsp: ENSP00000358360.3:p.Glu468Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1404A>C
  hgvsp: ENSP00000358363.4:p.Glu468Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.279A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1893A>C
  hgvsp: ENSP00000316434.9:p.Glu631Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1815A>C
  hgvsp: ENSP00000358366.4:p.Glu605Asp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.765A>C
  hgvsp: ENSP00000436791.1:p.Glu255Asp
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22243
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu468Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

1-144917890-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917890
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917890
    reference: chr 1
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.222A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1885A>G
  hgvsp: ENSP00000316434.9:p.Thr629Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1885A>G
  hgvsp: ENSP00000433392.1:p.Thr629Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1396A>G
  hgvsp: ENSP00000358363.4:p.Thr466Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1396A>G
  hgvsp: ENSP00000358360.3:p.Thr466Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.757A>G
  hgvsp: ENSP00000436791.1:p.Thr253Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.271A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1396A>G
  hgvsp: ENSP00000358357.3:p.Thr466Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1807A>G
  hgvsp: ENSP00000435654.1:p.Thr603Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1594A>G
  hgvsp: ENSP00000327209.9:p.Thr532Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1807A>G
  hgvsp: ENSP00000358366.4:p.Thr603Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1396A>G
  hgvsp: ENSP00000358355.3:p.Thr466Ala
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.433A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr466Ala
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-144917896-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917896
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917896
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1879G>C
  hgvsp: ENSP00000433392.1:p.Asp627His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1390G>C
  hgvsp: ENSP00000358355.3:p.Asp464His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1801G>C
  hgvsp: ENSP00000358366.4:p.Asp601His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.265G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1879G>C
  hgvsp: ENSP00000316434.9:p.Asp627His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.427G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1390G>C
  hgvsp: ENSP00000358357.3:p.Asp464His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.751G>C
  hgvsp: ENSP00000436791.1:p.Asp251His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1390G>C
  hgvsp: ENSP00000358360.3:p.Asp464His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1801G>C
  hgvsp: ENSP00000435654.1:p.Asp601His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.216G>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1390G>C
  hgvsp: ENSP00000358363.4:p.Asp464His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1588G>C
  hgvsp: ENSP00000327209.9:p.Asp530His
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp464His
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

1-144917903-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917903
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917903
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1383T>C
  hgvsp: ENST00000369354.3:c.1383T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1383T>C
  hgvsp: ENST00000369351.3:c.1383T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.744T>C
  hgvsp: ENST00000479408.2:c.744T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1872T>C
  hgvsp: ENST00000529945.1:c.1872T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.209T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1872T>C
  hgvsp: ENST00000313431.9:c.1872T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.420T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1383T>C
  hgvsp: ENST00000369349.3:c.1383T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1383T>C
  hgvsp: ENST00000369356.4:c.1383T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1581T>C
  hgvsp: ENST00000313382.9:c.1581T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.258T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1794T>C
  hgvsp: ENST00000369359.4:c.1794T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1794T>C
  hgvsp: ENST00000530740.1:c.1794T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp461Asp
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

1-144917904-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917904
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917904
    reference: chr 1
allele count: 3
allele frequency: 2.47137325974133e-5
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1871A>G
  hgvsp: ENSP00000316434.9:p.Asp624Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.743A>G
  hgvsp: ENSP00000436791.1:p.Asp248Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1382A>G
  hgvsp: ENSP00000358360.3:p.Asp461Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1382A>G
  hgvsp: ENSP00000358363.4:p.Asp461Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1580A>G
  hgvsp: ENSP00000327209.9:p.Asp527Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.419A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1382A>G
  hgvsp: ENSP00000358355.3:p.Asp461Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1793A>G
  hgvsp: ENSP00000358366.4:p.Asp598Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1382A>G
  hgvsp: ENSP00000358357.3:p.Asp461Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.208A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1793A>G
  hgvsp: ENSP00000435654.1:p.Asp598Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1871A>G
  hgvsp: ENSP00000433392.1:p.Asp624Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.257A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp461Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

1-144917907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917907
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917907
    reference: chr 1
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1379G>A
  hgvsp: ENSP00000358357.3:p.Arg460Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1379G>A
  hgvsp: ENSP00000358355.3:p.Arg460Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1379G>A
  hgvsp: ENSP00000358360.3:p.Arg460Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1790G>A
  hgvsp: ENSP00000358366.4:p.Arg597Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1379G>A
  hgvsp: ENSP00000358363.4:p.Arg460Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.205G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.416G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.740G>A
  hgvsp: ENSP00000436791.1:p.Arg247Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1868G>A
  hgvsp: ENSP00000433392.1:p.Arg623Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1790G>A
  hgvsp: ENSP00000435654.1:p.Arg597Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1577G>A
  hgvsp: ENSP00000327209.9:p.Arg526Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1868G>A
  hgvsp: ENSP00000316434.9:p.Arg623Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.254G>A
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg460Gln
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-144917908-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917908
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917908
    reference: chr 1
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1576C>T
  hgvsp: ENSP00000327209.9:p.Arg526Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1378C>T
  hgvsp: ENSP00000358357.3:p.Arg460Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1867C>T
  hgvsp: ENSP00000433392.1:p.Arg623Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.415C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1789C>T
  hgvsp: ENSP00000435654.1:p.Arg597Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1378C>T
  hgvsp: ENSP00000358360.3:p.Arg460Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1378C>T
  hgvsp: ENSP00000358355.3:p.Arg460Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1867C>T
  hgvsp: ENSP00000316434.9:p.Arg623Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.739C>T
  hgvsp: ENSP00000436791.1:p.Arg247Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1378C>T
  hgvsp: ENSP00000358363.4:p.Arg460Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1789C>T
  hgvsp: ENSP00000358366.4:p.Arg597Ter
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.204C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.253C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg460Ter
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-144917908-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917908
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917908
    reference: chr 1
allele count: 2
allele frequency: 1.647962294622699e-5
allele num: 121362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.739C>G
  hgvsp: ENSP00000436791.1:p.Arg247Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1789C>G
  hgvsp: ENSP00000358366.4:p.Arg597Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.253C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1378C>G
  hgvsp: ENSP00000358355.3:p.Arg460Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1378C>G
  hgvsp: ENSP00000358363.4:p.Arg460Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1867C>G
  hgvsp: ENSP00000433392.1:p.Arg623Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1789C>G
  hgvsp: ENSP00000435654.1:p.Arg597Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.204C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1576C>G
  hgvsp: ENSP00000327209.9:p.Arg526Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1867C>G
  hgvsp: ENSP00000316434.9:p.Arg623Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1378C>G
  hgvsp: ENSP00000358357.3:p.Arg460Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.415C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1378C>G
  hgvsp: ENSP00000358360.3:p.Arg460Gly
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg460Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

1-144917911-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917911
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917911
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1864T>C
  hgvsp: ENSP00000433392.1:p.Tyr622His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1375T>C
  hgvsp: ENSP00000358360.3:p.Tyr459His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1375T>C
  hgvsp: ENSP00000358355.3:p.Tyr459His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.736T>C
  hgvsp: ENSP00000436791.1:p.Tyr246His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.250T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1573T>C
  hgvsp: ENSP00000327209.9:p.Tyr525His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1375T>C
  hgvsp: ENSP00000358363.4:p.Tyr459His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1375T>C
  hgvsp: ENSP00000358357.3:p.Tyr459His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1786T>C
  hgvsp: ENSP00000435654.1:p.Tyr596His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1864T>C
  hgvsp: ENSP00000316434.9:p.Tyr622His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1786T>C
  hgvsp: ENSP00000358366.4:p.Tyr596His
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.201T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.412T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr459His
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

1-144917915-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917915
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917915
    reference: chr 1
allele count: 6
allele frequency: 4.944049836022347e-5
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1782A>G
  hgvsp: ENST00000369359.4:c.1782A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1371A>G
  hgvsp: ENST00000369351.3:c.1371A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1371A>G
  hgvsp: ENST00000369349.3:c.1371A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1569A>G
  hgvsp: ENST00000313382.9:c.1569A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1860A>G
  hgvsp: ENST00000529945.1:c.1860A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1782A>G
  hgvsp: ENST00000530740.1:c.1782A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.246A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1371A>G
  hgvsp: ENST00000369356.4:c.1371A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1371A>G
  hgvsp: ENST00000369354.3:c.1371A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.732A>G
  hgvsp: ENST00000479408.2:c.732A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.197A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1860A>G
  hgvsp: ENST00000313431.9:c.1860A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.408A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22239
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu457Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

1-144917919-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917919
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917919
    reference: chr 1
allele count: 18
allele frequency: 1.483606152020177e-4
allele num: 121326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.728T>C
  hgvsp: ENSP00000436791.1:p.Leu243Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.242T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1367T>C
  hgvsp: ENSP00000358355.3:p.Leu456Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1367T>C
  hgvsp: ENSP00000358357.3:p.Leu456Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1856T>C
  hgvsp: ENSP00000316434.9:p.Leu619Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1565T>C
  hgvsp: ENSP00000327209.9:p.Leu522Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1367T>C
  hgvsp: ENSP00000358360.3:p.Leu456Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1856T>C
  hgvsp: ENSP00000433392.1:p.Leu619Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1778T>C
  hgvsp: ENSP00000435654.1:p.Leu593Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1778T>C
  hgvsp: ENSP00000358366.4:p.Leu593Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.193T>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1367T>C
  hgvsp: ENSP00000358363.4:p.Leu456Pro
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.404T>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu456Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

1-144917921-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917921
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917921
    reference: chr 1
allele count: 27
allele frequency: 2.225555976854218e-4
allele num: 121318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1854G>A
  hgvsp: ENST00000529945.1:c.1854G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.402G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1365G>A
  hgvsp: ENST00000369356.4:c.1365G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1563G>A
  hgvsp: ENST00000313382.9:c.1563G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1365G>A
  hgvsp: ENST00000369354.3:c.1365G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.240G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1854G>A
  hgvsp: ENST00000313431.9:c.1854G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1365G>A
  hgvsp: ENST00000369351.3:c.1365G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1776G>A
  hgvsp: ENST00000530740.1:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1776G>A
  hgvsp: ENST00000369359.4:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.726G>A
  hgvsp: ENST00000479408.2:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.191G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1365G>A
  hgvsp: ENST00000369349.3:c.1365G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22226
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu455Glu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-144917922-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917922
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917921
    reference: chr 1
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.724delG
  hgvsp: ENSP00000436791.1:p.Glu242SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1561delG
  hgvsp: ENSP00000327209.9:p.Glu521SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1774delG
  hgvsp: ENSP00000358366.4:p.Glu592SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.189delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.400delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1363delG
  hgvsp: ENSP00000358360.3:p.Glu455SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1852delG
  hgvsp: ENSP00000316434.9:p.Glu618SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1363delG
  hgvsp: ENSP00000358357.3:p.Glu455SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1363delG
  hgvsp: ENSP00000358363.4:p.Glu455SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1852delG
  hgvsp: ENSP00000433392.1:p.Glu618SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.238delG
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1774delG
  hgvsp: ENSP00000435654.1:p.Glu592SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1363delG
  hgvsp: ENSP00000358355.3:p.Glu455SerfsTer38
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu455SerfsTer38
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: TC
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-144917925-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917925
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917925
    reference: chr 1
allele count: 6
allele frequency: 4.946332294603551e-5
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.722G>A
  hgvsp: ENSP00000436791.1:p.Arg241Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.236G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1850G>A
  hgvsp: ENSP00000316434.9:p.Arg617Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.398G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1850G>A
  hgvsp: ENSP00000433392.1:p.Arg617Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1361G>A
  hgvsp: ENSP00000358360.3:p.Arg454Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1361G>A
  hgvsp: ENSP00000358357.3:p.Arg454Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.187G>A
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1361G>A
  hgvsp: ENSP00000358355.3:p.Arg454Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1361G>A
  hgvsp: ENSP00000358363.4:p.Arg454Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1559G>A
  hgvsp: ENSP00000327209.9:p.Arg520Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1772G>A
  hgvsp: ENSP00000358366.4:p.Arg591Gln
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1772G>A
  hgvsp: ENSP00000435654.1:p.Arg591Gln
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg454Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

1-144917926-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917926
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917926
    reference: chr 1
allele count: 2
allele frequency: 1.648940555692967e-5
allele num: 121290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1771C>T
  hgvsp: ENSP00000435654.1:p.Arg591Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1771C>T
  hgvsp: ENSP00000358366.4:p.Arg591Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.721C>T
  hgvsp: ENSP00000436791.1:p.Arg241Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1360C>T
  hgvsp: ENSP00000358360.3:p.Arg454Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1849C>T
  hgvsp: ENSP00000433392.1:p.Arg617Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1849C>T
  hgvsp: ENSP00000316434.9:p.Arg617Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1360C>T
  hgvsp: ENSP00000358363.4:p.Arg454Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.397C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1360C>T
  hgvsp: ENSP00000358355.3:p.Arg454Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1558C>T
  hgvsp: ENSP00000327209.9:p.Arg520Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.186C>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1360C>T
  hgvsp: ENSP00000358357.3:p.Arg454Trp
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.235C>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg454Trp
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-144917926-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917926
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917926
    reference: chr 1
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1558C>G
  hgvsp: ENSP00000327209.9:p.Arg520Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1360C>G
  hgvsp: ENSP00000358360.3:p.Arg454Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.397C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1771C>G
  hgvsp: ENSP00000435654.1:p.Arg591Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1849C>G
  hgvsp: ENSP00000316434.9:p.Arg617Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1360C>G
  hgvsp: ENSP00000358355.3:p.Arg454Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.235C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1360C>G
  hgvsp: ENSP00000358357.3:p.Arg454Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.721C>G
  hgvsp: ENSP00000436791.1:p.Arg241Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1849C>G
  hgvsp: ENSP00000433392.1:p.Arg617Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1360C>G
  hgvsp: ENSP00000358363.4:p.Arg454Gly
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.186C>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1771C>G
  hgvsp: ENSP00000358366.4:p.Arg591Gly
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22205
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg454Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-144917929-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917929
    reference: chr 1
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1357T>G
  hgvsp: ENSP00000358360.3:p.Phe453Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.394T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.718T>G
  hgvsp: ENSP00000436791.1:p.Phe240Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1357T>G
  hgvsp: ENSP00000358357.3:p.Phe453Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1555T>G
  hgvsp: ENSP00000327209.9:p.Phe519Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.232T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1768T>G
  hgvsp: ENSP00000358366.4:p.Phe590Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1768T>G
  hgvsp: ENSP00000435654.1:p.Phe590Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1846T>G
  hgvsp: ENSP00000433392.1:p.Phe616Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1357T>G
  hgvsp: ENSP00000358363.4:p.Phe453Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.183T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1846T>G
  hgvsp: ENSP00000316434.9:p.Phe616Val
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1357T>G
  hgvsp: ENSP00000358355.3:p.Phe453Val
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22204
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe453Val
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

1-144917930-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917930
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917930
    reference: chr 1
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.182A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1554A>G
  hgvsp: ENST00000313382.9:c.1554A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1845A>G
  hgvsp: ENST00000529945.1:c.1845A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1356A>G
  hgvsp: ENST00000369354.3:c.1356A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1767A>G
  hgvsp: ENST00000369359.4:c.1767A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.231A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.393A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1845A>G
  hgvsp: ENST00000313431.9:c.1845A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.717A>G
  hgvsp: ENST00000479408.2:c.717A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1767A>G
  hgvsp: ENST00000530740.1:c.1767A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1356A>G
  hgvsp: ENST00000369351.3:c.1356A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1356A>G
  hgvsp: ENST00000369349.3:c.1356A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1356A>G
  hgvsp: ENST00000369356.4:c.1356A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1356A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS

http://identifiers.org/exac.variant/1-144917939-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917939
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917939
    reference: chr 1
allele count: 7
allele frequency: 5.775768177167563e-5
allele num: 121196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-7G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-7G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22203
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1354-7G>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-144917946-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917946
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917946
    reference: chr 1
allele count: 5
allele frequency: 4.12847824291966e-5
allele num: 121110
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-14A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-14A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-144917950-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917950
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917950
    reference: chr 1
allele count: 6
allele frequency: 4.960809604127394e-5
allele num: 120948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-18A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-18A>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22198
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/1-144917952-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917952
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917952
    reference: chr 1
allele count: 2
allele frequency: 1.653630545863443e-5
allele num: 120946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-20G>T
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-20G>T
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22196
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-144917962-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917962
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917962
    reference: chr 1
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-30A>C
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-30A>C
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22195
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-144917966-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917966
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917966
    reference: chr 1
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-34A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-34A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22195
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/1-144917970-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917970
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917970
    reference: chr 1
allele count: 1
allele frequency: 8.279516476237788e-6
allele num: 120780
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-38T>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-38T>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22194
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-144917971-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917971
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917971
    reference: chr 1
allele count: 2
allele frequency: 1.655875875544369e-5
allele num: 120782
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-39A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-39A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

1-144917978-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144917978
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144917978
    reference: chr 1
allele count: 2
allele frequency: 1.657275439177991e-5
allele num: 120680
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000435654
  ensembl transcript: ENST00000530740
  gene symbol: PDE4DIP
  hgvsc: ENST00000530740.1:c.1765-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000316434
  ensembl transcript: ENST00000313431
  gene symbol: PDE4DIP
  hgvsc: ENST00000313431.9:c.1843-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358355
  ensembl transcript: ENST00000369349
  gene symbol: PDE4DIP
  hgvsc: ENST00000369349.3:c.1354-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000433392
  ensembl transcript: ENST00000529945
  gene symbol: PDE4DIP
  hgvsc: ENST00000529945.1:c.1843-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000496263
  gene symbol: PDE4DIP
  hgvsc: ENST00000496263.2:n.391-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358360
  ensembl transcript: ENST00000369354
  gene symbol: PDE4DIP
  hgvsc: ENST00000369354.3:c.1354-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000467859
  gene symbol: PDE4DIP
  hgvsc: ENST00000467859.2:n.229-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358357
  ensembl transcript: ENST00000369351
  gene symbol: PDE4DIP
  hgvsc: ENST00000369351.3:c.1354-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358363
  ensembl transcript: ENST00000369356
  gene symbol: PDE4DIP
  hgvsc: ENST00000369356.4:c.1354-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000327209
  ensembl transcript: ENST00000313382
  gene symbol: PDE4DIP
  hgvsc: ENST00000313382.9:c.1552-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000436791
  ensembl transcript: ENST00000479408
  gene symbol: PDE4DIP
  hgvsc: ENST00000479408.2:c.715-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl transcript: ENST00000525886
  gene symbol: PDE4DIP
  hgvsc: ENST00000525886.1:n.180-46A>G
  variant of: http://identifiers.org/hgnc/15580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000178104
  ensembl protein: ENSP00000358366
  ensembl transcript: ENST00000369359
  gene symbol: PDE4DIP
  hgvsc: ENST00000369359.4:c.1765-46A>G
  variant of: http://identifiers.org/hgnc/15580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
reference allele: T

GenotypeDepth
all individuals: 2108
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40447
bin: 9.75e1
variant carriers: 18

GenotypeDepth
all individuals: 1440
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55255
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.850114004560182e-4
allele num: 66664
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.89e0

QD
type: SiteQuality
SIO_000300: 5.02e0

DP
type: SiteQuality
SIO_000300: 6.849404e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.299e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 7.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

MQ
type: SiteQuality
SIO_000300: 4.578e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.255e0

GenotypeDepth
all individuals: 40446
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2441
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55253
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 9.98e-1

MQ
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BaseQRankSum
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SIO_000300: -9.901e0

DP
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InbreedingCoeff
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QD
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ReadPosRankSum
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SIO_000300: 3.92e-1

FS
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SIO_000300: 0.0e0

VQSLOD
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ClippingRankSum
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SIO_000300: 4.46e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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Other
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.000120004800192e-5
allele num: 66664
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InbreedingCoeff
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SIO_000300: 2.8e-3

MQ
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VQSLOD
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BaseQRankSum
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FS
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MQRankSum
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QD
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ClippingRankSum
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SIO_000300: 7.54e-1

ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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ReadPosRankSum
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VQSLOD
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FS
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ClippingRankSum
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BaseQRankSum
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MQ
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MQRankSum
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QD
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DP
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 3
allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66664
num of homozygotes: 0

South Asian
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African
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ReadPosRankSum
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SIO_000300: -3.4e-1

MQ
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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FS
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MQ
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QD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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Latino
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East Asian
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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East Asian
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DP
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -2.628e0

MQRankSum
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SIO_000300: -5.6e-2

MQ
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SIO_000300: 3.911e1

ReadPosRankSum
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SIO_000300: 9.6e-2

InbreedingCoeff
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VQSLOD
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DP
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SIO_000300: 6.853709e6

ClippingRankSum
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SIO_000300: -1.585e0

FS
type: SiteQuality
SIO_000300: 2.676e0

QD
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SIO_000300: 4.83e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 773
bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
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SIO_000300: -2.86e0

BaseQRankSum
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ReadPosRankSum
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SIO_000300: 9.6e-2

FS
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SIO_000300: 2.676e0

MQ
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InbreedingCoeff
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SIO_000300: 3.3e-3

MQRankSum
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SIO_000300: -5.6e-2

DP
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SIO_000300: 6.853709e6

ClippingRankSum
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SIO_000300: -1.585e0

QD
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SIO_000300: 4.83e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499505054444011e-5
allele num: 66674
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

InbreedingCoeff
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SIO_000300: 5.5e-3

QD
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SIO_000300: 4.83e0

DP
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SIO_000300: 6.854739e6

VQSLOD
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SIO_000300: -2.581e0

MQ
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SIO_000300: 3.998e1

BaseQRankSum
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SIO_000300: 3.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

FS
type: SiteQuality
SIO_000300: 1.998e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

GenotypeDepth
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variant carriers: 39

GenotypeDepth
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variant carriers: 34

GenotypeDepth
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variant carriers: 40

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 6180

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 419
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GenotypeQuality
all individuals: 747
bin: 6.75e1
variant carriers: 4

African
type: Population
allele count: 141
allele frequency: 1.404102768372834e-2
allele num: 10042
num of homozygotes: 0

South Asian
type: Population
allele count: 488
allele frequency: 2.95650066642433e-2
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 212
allele frequency: 1.831058904819485e-2
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4931
allele frequency: 7.395242808722517e-2
allele num: 66678
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 394
allele frequency: 5.95706078016329e-2
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 38
allele frequency: 4.185022026431718e-2
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.077e1

FS
type: SiteQuality
SIO_000300: 7.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

ClippingRankSum
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SIO_000300: -1.305e0

InbreedingCoeff
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SIO_000300: -5.36e-2

DP
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SIO_000300: 7.159779e6

VQSLOD
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SIO_000300: -1.119e0

BaseQRankSum
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SIO_000300: 3.71e0

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

QD
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SIO_000300: 6.57e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

DP
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SIO_000300: 7.170462e6

ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 4.03e0

VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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DP
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SIO_000300: 7.171636e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
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South Asian
type: Population
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allele frequency: 6.058403004967891e-5
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 41818
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
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MQ
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MQRankSum
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FS
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BaseQRankSum
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VQSLOD
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QD
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DP
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 1
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allele num: 6614
num of homozygotes: 0

MQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.994125756758376e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele count: 12
allele frequency: 1.814333232537043e-3
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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FS
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QD
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DP
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SIO_000300: 1.0334979e7

MQ
type: SiteQuality
SIO_000300: 4.232e1

GenotypeDepth
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variant carriers: 321

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 320

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 4158
allele frequency: 4.022054556006965e-1
allele num: 10338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2106
allele frequency: 3.18415482310251e-1
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 376
allele frequency: 4.345815996301433e-2
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 2089
allele frequency: 1.804595715272979e-1
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 3595
allele frequency: 2.177732008723043e-1
allele num: 16508
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Other
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allele count: 275
allele frequency: 3.02863436123348e-1
allele num: 908
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European (Non-Finnish)
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allele count: 23204
allele frequency: 3.477192351495534e-1
allele num: 66732
num of homozygotes: 0

MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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QD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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African
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Latino
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European (Finnish)
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East Asian
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ReadPosRankSum
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MQRankSum
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VQSLOD
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DP
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FS
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MQ
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66740
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Latino
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African
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South Asian
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Other
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East Asian
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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DP
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.0635611e7

VQSLOD
type: SiteQuality
SIO_000300: -2.52e0

MQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

MQ
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SIO_000300: 4.082e1

ReadPosRankSum
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SIO_000300: 7.69e-1

ClippingRankSum
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SIO_000300: -6.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
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SIO_000300: 8.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.19e0

GenotypeDepth
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bin: 7.25e1
variant carriers: 134

GenotypeDepth
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bin: 3.75e1
variant carriers: 80

GenotypeDepth
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bin: 8.75e1
variant carriers: 320

GenotypeDepth
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variant carriers: 58601

GenotypeDepth
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variant carriers: 325

GenotypeDepth
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variant carriers: 127

GenotypeQuality
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bin: 4.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 60697

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

South Asian
type: Population
allele count: 8255
allele frequency: 5.0e-1
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 4327
allele frequency: 5.0e-1
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 5789
allele frequency: 5.0e-1
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 5200
allele frequency: 5.0e-1
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3307
allele frequency: 5.0e-1
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33370
allele frequency: 5.0e-1
allele num: 66740
num of homozygotes: 0

Other
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allele count: 454
allele frequency: 5.0e-1
allele num: 908
num of homozygotes: 0

ClippingRankSum
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SIO_000300: -8.159999999999999e-1

BaseQRankSum
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SIO_000300: 2.76e0

MQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 4.35e1

DP
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SIO_000300: 1.5806599e7

InbreedingCoeff
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SIO_000300: -9.996e-1

QD
type: SiteQuality
SIO_000300: 1.378e1

FS
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6659e2

GenotypeDepth
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bin: 4.25e1
variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.384e0

BaseQRankSum
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SIO_000300: -7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.37e-1

MQ
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SIO_000300: 4.262e1

MQRankSum
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SIO_000300: 4.05e-1

DP
type: SiteQuality
SIO_000300: 5.30288e6

FS
type: SiteQuality
SIO_000300: 2.495e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

QD
type: SiteQuality
SIO_000300: 2.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeDepth
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bin: 7.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.384e0

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 4.262e1

DP
type: SiteQuality
SIO_000300: 5.30288e6

FS
type: SiteQuality
SIO_000300: 2.495e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.37e-1

QD
type: SiteQuality
SIO_000300: 2.5e0

GenotypeDepth
all individuals: 3952
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1908
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variant carriers: 0

GenotypeDepth
all individuals: 7
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variant carriers: 0

GenotypeDepth
all individuals: 3429
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 54198
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variant carriers: 12

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.048846269103986e-4
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.477e1

DP
type: SiteQuality
SIO_000300: 5.302833e6

MQRankSum
type: SiteQuality
SIO_000300: 2.88e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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QD
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SIO_000300: 4.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 1909
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variant carriers: 0

GenotypeDepth
all individuals: 1389
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variant carriers: 0

GenotypeDepth
all individuals: 7
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variant carriers: 0

GenotypeDepth
all individuals: 8
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 5.993407252022775e-5
allele num: 66740
num of homozygotes: 0

East Asian
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Latino
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num of homozygotes: 0

European (Finnish)
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African
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allele frequency: 9.609840476648087e-5
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South Asian
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allele num: 16510
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MQRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 6.06e-1

ClippingRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.30088e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 2004
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variant carriers: 0

GenotypeDepth
all individuals: 2674
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.491759065028469e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 40
allele frequency: 2.422774076317383e-3
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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FS
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DP
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QD
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -1.813e0

ClippingRankSum
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SIO_000300: -1.262e0

FS
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SIO_000300: 3.935e0

DP
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ReadPosRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQ
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QD
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SIO_000300: 3.98e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
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allele num: 8654
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South Asian
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allele num: 16510
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European (Non-Finnish)
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allele frequency: 1.198681450404555e-4
allele num: 66740
num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele num: 11578
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ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

South Asian
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European (Finnish)
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allele count: 1
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allele num: 6614
num of homozygotes: 0

Other
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European (Non-Finnish)
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allele num: 66740
num of homozygotes: 0

African
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East Asian
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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FS
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

Latino
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African
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East Asian
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Other
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South Asian
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European (Finnish)
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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FS
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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FS
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QD
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ClippingRankSum
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DP
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VQSLOD
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MQ
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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variant carriers: 3

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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East Asian
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ReadPosRankSum
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MQRankSum
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QD
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BaseQRankSum
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FS
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DP
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MQ
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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African
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South Asian
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FS
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DP
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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Other
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South Asian
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East Asian
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MQ
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InbreedingCoeff
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VQSLOD
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FS
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DP
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Other
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Latino
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East Asian
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European (Non-Finnish)
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QD
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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East Asian
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African
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South Asian
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European (Finnish)
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Other
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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East Asian
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South Asian
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European (Finnish)
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Other
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MQ
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DP
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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DP
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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MQ
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SIO_000300: 4.633e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66740
num of homozygotes: 0

South Asian
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DP
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 8654
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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MQRankSum
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FS
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MQ
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ReadPosRankSum
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VQSLOD
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DP
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SIO_000300: 5.283868e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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East Asian
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allele num: 8654
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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QD
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Latino
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

Latino
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African
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East Asian
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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QD
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ClippingRankSum
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MQ
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MQRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
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QD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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SIO_000300: -8.73e-1

ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 5.281537e6

MQ
type: SiteQuality
SIO_000300: 5.226e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -3.43e-1

ClippingRankSum
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SIO_000300: -1.23e0

VQSLOD
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FS
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SIO_000300: 1.613e0

DP
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SIO_000300: 5.281212e6

BaseQRankSum
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SIO_000300: 6.82e0

MQ
type: SiteQuality
SIO_000300: 4.902e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 17

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 450
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 16
allele frequency: 9.691096305269534e-4
allele num: 16510
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -9.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -5.0e-4

VQSLOD
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SIO_000300: -1.61e0

DP
type: SiteQuality
SIO_000300: 5.27984e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQ
type: SiteQuality
SIO_000300: 4.942e1

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 54178
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variant carriers: 27

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 864
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GenotypeQuality
all individuals: 449
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variant carriers: 0

East Asian
type: Population
allele count: 26
allele frequency: 3.004391033048301e-3
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.878e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.053e-1

MQRankSum
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SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 8.8e-1

QD
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SIO_000300: 4.31e0

BaseQRankSum
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SIO_000300: -6.023e0

DP
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SIO_000300: 5.277684e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.45e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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SIO_000300: -9.311e-1

ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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MQRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 6

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.491759065028469e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.819e1

BaseQRankSum
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SIO_000300: 7.42e0

DP
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FS
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1800
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

South Asian
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allele count: 0
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allele num: 16510
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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Latino
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South Asian
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Other
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European (Non-Finnish)
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8654
num of homozygotes: 0

African
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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MQRankSum
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InbreedingCoeff
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66736
num of homozygotes: 0

South Asian
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European (Finnish)
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Other
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Latino
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African
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East Asian
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
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DP
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BaseQRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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African
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Other
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South Asian
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East Asian
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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African
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Other
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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African
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European (Finnish)
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQ
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ClippingRankSum
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QD
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

ReadPosRankSum
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SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

FS
type: SiteQuality
SIO_000300: 4.684e0

MQ
type: SiteQuality
SIO_000300: 5.377e1

QD
type: SiteQuality
SIO_000300: 4.57e0

DP
type: SiteQuality
SIO_000300: 5.257741e6

VQSLOD
type: SiteQuality
SIO_000300: -1.633e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.596e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
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bin: 6.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.9e1

MQRankSum
type: SiteQuality
SIO_000300: -2.427e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.191e0

DP
type: SiteQuality
SIO_000300: 5.254606e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.452e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 4.65e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 54170
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

QD
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SIO_000300: 4.28e0

VQSLOD
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SIO_000300: -2.124e0

ReadPosRankSum
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SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 1.217e1

DP
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SIO_000300: 5.251906e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.32e-1

MQ
type: SiteQuality
SIO_000300: 5.337e1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeDepth
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bin: 8.75e1
variant carriers: 0

GenotypeDepth
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bin: 5.25e1
variant carriers: 0

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 801
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variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.54e0

ClippingRankSum
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SIO_000300: 3.12e-1

MQ
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SIO_000300: 5.57e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
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SIO_000300: 1.65e0

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

QD
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 5.249011e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.71e-1

GenotypeDepth
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bin: 9.75e1
variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.002011347602894e-5
allele num: 66622
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.99e0

FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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MQ
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SIO_000300: 5.405e1

VQSLOD
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DP
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SIO_000300: 5.248987e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 786
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 54169
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 203
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0