1-155650275-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155650275
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155650275
    reference: chr 1
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-20-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.191-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-66312T>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-67017T>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-12-972A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.395-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-20-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-20-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-20-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-20-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-134-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-20-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-20-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.395-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-87-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-20-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-134-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-67079T>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-87-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.179-28A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.395-28A>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

1-155650277-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155650277
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155650277
    reference: chr 1
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-20-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-20-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.47-974T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-66310A>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-134-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-20-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-67015A>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.395-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-87-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.191-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.179-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-20-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-134-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-20-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.395-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-20-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-12-974T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-20-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-20-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.395-30T>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-87-30T>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-155650288-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155650288
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155650288
    reference: chr 1
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.395-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.395-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-67004T>C
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-66299T>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-134-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.395-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.191-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-87-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-87-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.179-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.47-985A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-134-41A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-20-41A>G
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

1-155650294-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155650294
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155650294
    reference: chr 1
allele count: 1
allele frequency: 8.254366559910193e-6
allele num: 121148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-20-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-66293A>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.179-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-87-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.395-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.395-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-20-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-20-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-20-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-134-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-20-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-20-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-66998A>G
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-134-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.191-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-20-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-12-991T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.47-991T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.395-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-87-47T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-20-47T>C
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

1-155650298-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155650298
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155650298
    reference: chr 1
allele count: 5
allele frequency: 4.12779658218443e-5
allele num: 121130
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-134-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.395-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-66994T>C
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.395-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.47-995A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.179-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-87-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.191-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-66289T>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-87-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-134-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-20-51A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-67056T>C
  variant of: http://identifiers.org/hgnc/29678
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

1-155657812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657812
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657812
    reference: chr 1
allele count: 2
allele frequency: 1.83368478958467e-5
allele num: 109070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-13+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.62C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-21+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-21+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-88+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+909G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.190+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.394+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59480C>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+638G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-259C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.394+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58775C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-21+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-135+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-21+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-135+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-352C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+50G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59542C>T
  variant of: http://identifiers.org/hgnc/29678
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

1-155657817-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657817
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657817
    reference: chr 1
allele count: 1
allele frequency: 9.158180086453219e-6
allele num: 109192
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-21+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+633T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-347A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+904T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+904T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59537A>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-21+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-88+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-135+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-21+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59475A>G
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+904T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-254A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.36A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-135+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.67A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58770A>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.394+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-88+45T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+45T>C
  variant of: http://identifiers.org/hgnc/30935
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-155657841-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657841
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657841
    reference: chr 1
allele count: 3
allele frequency: 2.73403324584427e-5
allele num: 109728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+609C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59451G>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-323G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-21+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+880C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.394+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.91G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-230G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-21+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-21+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.394+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58746G>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59513G>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-135+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-21+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-88+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.60G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-88+21C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.394+21C>A
  variant of: http://identifiers.org/hgnc/30935
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ

1-155657844-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657844
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657844
    reference: chr 1
allele count: 1
allele frequency: 9.102162673851307e-6
allele num: 109864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-21+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.63C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+877G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-21+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+606G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.394+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59448C>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-320C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.190+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-135+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59510C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-21+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-227C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-13+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.394+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+877G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-21+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+18G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.94C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-135+18G>A
  variant of: http://identifiers.org/hgnc/30935
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-155657845-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657845
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657845
    reference: chr 1
allele count: 132
allele frequency: 1.200764122623488e-3
allele num: 109930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.64C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-21+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-135+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-135+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-21+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-226C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.95C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-319C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.394+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59447C>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-21+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-21+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+605G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59509C>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+876G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+876G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-88+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-13+17G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.394+17G>T
  variant of: http://identifiers.org/hgnc/30935
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

1-155657852-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657852
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657852
    reference: chr 1
allele count: 1
allele frequency: 9.070459328060374e-6
allele num: 110248
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-88+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59440T>C
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+869A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-21+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59502T>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-13+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+598A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+869A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-135+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.102T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.71T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-21+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+869A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-312T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-135+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58735T>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-21+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.394+10A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.190+10A>G
  variant of: http://identifiers.org/hgnc/30935
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

1-155657854-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657854
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657854
    reference: chr 1
allele count: 1
allele frequency: 9.066840750009067e-6
allele num: 110292
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.394+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-88+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-88+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.394+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-21+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-21+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-21+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59438C>G
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59500C>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-13+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+596G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.190+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-135+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-21+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+867G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.394+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-135+8G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+8G>C
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.394+8G>C
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

1-155657857-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657857
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657857
    reference: chr 1
allele count: 1
allele frequency: 9.053870529651426e-6
allele num: 110450
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-21+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.394+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.394+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-21+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-21+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.190+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.394+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-135+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.107C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-88+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+864G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-21+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-214C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-135+5G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-307C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+593G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+864G>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.394+5G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/1-155657861-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657861
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657861
    reference: chr 1
allele count: 1
allele frequency: 9.031302494445749e-6
allele num: 110726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.80C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59431C>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+860G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-88+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+589G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.394+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59493C>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-135+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-210C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.394+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-21+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-88+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.190+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-13+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+860G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-21+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.394+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-21+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.178+1G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-303C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-21+1G>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.394+1G>T
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

1-155657862-CGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657862
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657860
    reference: chr 1
allele count: 4
allele frequency: 3.609326499675161e-5
allele num: 110824
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.176_177delAC
  hgvsp: ENSP00000295566.4:p.His59ArgfsTer6
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-23_-22delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-23_-22delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-23_-22delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-23_-22delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.392_393delAC
  hgvsp: ENSP00000384583.3:p.His131ArgfsTer6
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58722_291-58721delGT
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.392_393delAC
  hgvsp: ENSP00000357323.5:p.His131ArgfsTer6
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-23_-22delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-137_-136delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+857_-21+858delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+857_46+858delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-299_-298delGT
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.84_85delGT
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.392_393delAC
  hgvsp: ENSP00000357324.5:p.His131ArgfsTer6
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.188_189delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59489_561-59488delGT
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-90_-89delAC
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-137_-136delAC
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.His131ArgfsTer6
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: CGT
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

1-155657865-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657865
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657865
    reference: chr 1
allele count: 1
allele frequency: 8.997984451482868e-6
allele num: 111136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-24C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.391C>T
  hgvsp: ENSP00000357324.5:p.His131Tyr
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59489G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-91C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-138C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.175C>T
  hgvsp: ENSP00000295566.4:p.His59Tyr
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.391C>T
  hgvsp: ENSP00000384583.3:p.His131Tyr
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-16C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+856C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58722G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-138C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-299G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.115G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.391C>T
  hgvsp: ENSP00000357323.5:p.His131Tyr
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.187C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-206G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59427G>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+856C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+585C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.His131Tyr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

1-155657866-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657866
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657866
    reference: chr 1
allele count: 4
allele frequency: 3.597639948193985e-5
allele num: 111184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-92A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-25A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.390A>T
  hgvsp: ENST00000405763.3:c.390A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58721T>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-25A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.174A>T
  hgvsp: ENST00000295566.4:c.174A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.186A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-205T>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.390A>T
  hgvsp: ENST00000368339.5:c.390A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-92A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-25A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-25A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-25A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-139A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+855A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-25A>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.390A>T
  hgvsp: ENST00000368340.5:c.390A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59488T>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-298T>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.85T>A
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg130Arg
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-155657869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657869
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657869
    reference: chr 1
allele count: 1
allele frequency: 8.962018963632127e-6
allele num: 111582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.171C>T
  hgvsp: ENST00000295566.4:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-142C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.387C>T
  hgvsp: ENST00000405763.3:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-28C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59485G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.387C>T
  hgvsp: ENST00000368340.5:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-142C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-95C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.183C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59423G>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-95C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-28C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-28C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.88G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+852C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-20C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+852C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.387C>T
  hgvsp: ENST00000368339.5:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+852C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-202G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-28C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu129Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-155657871-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657871
    reference: chr 1
allele count: 247
allele frequency: 2.210132607956477e-3
allele num: 111758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-144C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-30C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+579C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-97C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-97C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-30C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-293G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.181C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.385C>T
  hgvsp: ENSP00000357324.5:p.Leu129Phe
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-30C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-144C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.385C>T
  hgvsp: ENSP00000357323.5:p.Leu129Phe
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.169C>T
  hgvsp: ENSP00000295566.4:p.Leu57Phe
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59483G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-200G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-30C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-30C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.385C>T
  hgvsp: ENSP00000384583.3:p.Leu129Phe
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.121G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.90G>A
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu129Phe
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

1-155657872-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657872
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657872
    reference: chr 1
allele count: 1
allele frequency: 8.943743851176102e-6
allele num: 111810
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59420G>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.384C>T
  hgvsp: ENST00000368340.5:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.384C>T
  hgvsp: ENST00000368339.5:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-145C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.91G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.384C>T
  hgvsp: ENST00000405763.3:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-199G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-98C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-23C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-31C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-31C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-31C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-31C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-292G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-31C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+849C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.168C>T
  hgvsp: ENST00000295566.4:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-98C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+849C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.122G>A
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly128Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

1-155657873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657873
    reference: chr 1
allele count: 1
allele frequency: 8.939905952189383e-6
allele num: 111858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-99G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.383G>A
  hgvsp: ENSP00000357323.5:p.Gly128Asp
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-198C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59419C>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.383G>A
  hgvsp: ENSP00000384583.3:p.Gly128Asp
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.92C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+577G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-32G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-32G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-146G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59481C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-99G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+848G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.383G>A
  hgvsp: ENSP00000357324.5:p.Gly128Asp
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-32G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.167G>A
  hgvsp: ENSP00000295566.4:p.Gly56Asp
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+848G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.179G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58714C>T
  variant of: http://identifiers.org/hgnc/29678
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly128Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-155657877-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657877
    reference: chr 1
allele count: 2
allele frequency: 1.77945441927505e-5
allele num: 112394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.96G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-28C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-150C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.379C>G
  hgvsp: ENSP00000357324.5:p.Leu127Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+844C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-287G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.175C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58710G>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.163C>G
  hgvsp: ENSP00000295566.4:p.Leu55Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+844C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.127G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59477G>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-150C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-36C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.379C>G
  hgvsp: ENSP00000384583.3:p.Leu127Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.379C>G
  hgvsp: ENSP00000357323.5:p.Leu127Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-36C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-194G>C
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu127Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

1-155657890-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657890
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657890
    reference: chr 1
allele count: 705
allele frequency: 6.196494805491589e-3
allele num: 113774
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+831T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+560T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.366T>C
  hgvsp: ENST00000405763.3:c.366T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-41T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.366T>C
  hgvsp: ENST00000368339.5:c.366T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-181A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-49T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59402A>G
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-163T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-49T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-163T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-116T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.366T>C
  hgvsp: ENST00000368340.5:c.366T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-116T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-49T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.150T>C
  hgvsp: ENST00000295566.4:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.109A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-49T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.140A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-49T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58697A>G
  variant of: http://identifiers.org/hgnc/29678
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Cys122Cys
num of homozygotes: 35
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

1-155657895-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657895
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657895
    reference: chr 1
allele count: 1
allele frequency: 8.750743813224124e-6
allele num: 114276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+826C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-54C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-121C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58692G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-54C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+555C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-54C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.361C>T
  hgvsp: ENSP00000357323.5:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-54C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.114G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.361C>T
  hgvsp: ENSP00000384583.3:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-168C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+826C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.361C>T
  hgvsp: ENSP00000357324.5:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.145C>T
  hgvsp: ENSP00000295566.4:p.Pro49Ser
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-176G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59459G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-54C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+826C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.145G>A
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro121Ser
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-155657895-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657895
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657895
    reference: chr 1
allele count: 1
allele frequency: 8.750743813224124e-6
allele num: 114276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+826C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.157C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+555C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-54C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-54C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-121C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.361C>G
  hgvsp: ENSP00000357323.5:p.Pro121Ala
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58692G>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-54C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.145C>G
  hgvsp: ENSP00000295566.4:p.Pro49Ala
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-54C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-168C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-54C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-46C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-269G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59459G>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-54C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.361C>G
  hgvsp: ENSP00000384583.3:p.Pro121Ala
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.361C>G
  hgvsp: ENSP00000357324.5:p.Pro121Ala
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59397G>C
  variant of: http://identifiers.org/hgnc/26329
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro121Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-155657898-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657898
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657898
    reference: chr 1
allele count: 2
allele frequency: 1.744835287548855e-5
allele num: 114624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-173G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+823C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.358C>A
  hgvsp: ENSP00000384583.3:p.Leu120Ile
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-124C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-57C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+823C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.154C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.358C>A
  hgvsp: ENSP00000357324.5:p.Leu120Ile
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-124C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-171C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-49C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59394G>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-57C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.142C>A
  hgvsp: ENSP00000295566.4:p.Leu48Ile
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-57C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.358C>A
  hgvsp: ENSP00000357323.5:p.Leu120Ile
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-57C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+552C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.148G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58689G>T
  variant of: http://identifiers.org/hgnc/29678
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu120Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

1-155657899-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657899
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657899
    reference: chr 1
allele count: 1
allele frequency: 8.722350150024422e-6
allele num: 114648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.118T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-172A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-58A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.357A>G
  hgvsp: ENST00000405763.3:c.357A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59393T>C
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-50A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59455T>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.141A>G
  hgvsp: ENST00000295566.4:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.357A>G
  hgvsp: ENST00000368339.5:c.357A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.357A>G
  hgvsp: ENST00000368340.5:c.357A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+822A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-58A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-58A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-125A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-58A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.149T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.153A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-58A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-265T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+551A>G
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser119Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

1-155657901-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657901
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657901
    reference: chr 1
allele count: 853
allele frequency: 7.426432178304022e-3
allele num: 114860
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.151A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+820T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58686A>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.355T>C
  hgvsp: ENSP00000384583.3:p.Ser119Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-174T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.355T>C
  hgvsp: ENSP00000357323.5:p.Ser119Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-127T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-60T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-60T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-174T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.355T>C
  hgvsp: ENSP00000357324.5:p.Ser119Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+549T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-60T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-60T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-127T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-52T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-60T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.151T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+820T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-170A>G
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser119Pro
num of homozygotes: 7
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

1-155657905-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657905
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657905
    reference: chr 1
allele count: 2
allele frequency: 1.735689242198077e-5
allele num: 115228
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-64T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-64T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-64T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-131T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-178T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+816T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.351T>C
  hgvsp: ENST00000368340.5:c.351T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+816T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-178T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.351T>C
  hgvsp: ENST00000368339.5:c.351T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58682A>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-259A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.135T>C
  hgvsp: ENST00000295566.4:c.135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-131T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59387A>G
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-64T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-64T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59449A>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-56T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+545T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-64T>C
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser117Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

1-155657906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657906
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657906
    reference: chr 1
allele count: 2
allele frequency: 1.733823427422151e-5
allele num: 115352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-57C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-258G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-65C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-65C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.134C>T
  hgvsp: ENSP00000295566.4:p.Ser45Phe
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58681G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.350C>T
  hgvsp: ENSP00000384583.3:p.Ser117Phe
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-179C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-65C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+544C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59386G>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.156G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.350C>T
  hgvsp: ENSP00000357324.5:p.Ser117Phe
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-65C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-132C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.350C>T
  hgvsp: ENSP00000357323.5:p.Ser117Phe
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-165G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+815C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-65C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-179C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser117Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-155657906-GAGGGGGTGGCCGCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657906
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657892
    reference: chr 1
allele count: 1
allele frequency: 8.669117137110756e-6
allele num: 115352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsp: ENSP00000384583.3:p.Ala113PhefsTer20
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsp: ENSP00000357324.5:p.Ala113PhefsTer20
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsp: ENSP00000357323.5:p.Ala113PhefsTer20
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsp: ENSP00000295566.4:p.Ala41PhefsTer20
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala113PhefsTer20
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: GAGGGGGTGGCCGCC
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

1-155657908-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657908
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657908
    reference: chr 1
allele count: 1
allele frequency: 8.657259111765215e-6
allele num: 115510
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-59C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+542C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59384G>C
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-256G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-67C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-181C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-134C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.132C>G
  hgvsp: ENST00000295566.4:c.132C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.348C>G
  hgvsp: ENST00000405763.3:c.348C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+813C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-67C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-67C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58679G>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.127G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-163G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.348C>G
  hgvsp: ENST00000368340.5:c.348C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.348C>G
  hgvsp: ENST00000368339.5:c.348C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-181C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-67C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+813C>G
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro116Pro
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

1-155657909-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657909
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657909
    reference: chr 1
allele count: 2
allele frequency: 1.729684851420071e-5
allele num: 115628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-182C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.347C>T
  hgvsp: ENSP00000357324.5:p.Pro116Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-60C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-68C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.347C>T
  hgvsp: ENSP00000384583.3:p.Pro116Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-135C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.128G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58678G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+812C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+812C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.131C>T
  hgvsp: ENSP00000295566.4:p.Pro44Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.159G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+812C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-68C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59445G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-255G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.347C>T
  hgvsp: ENSP00000357323.5:p.Pro116Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-182C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-68C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-68C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro116Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-155657912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657912
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657912
    reference: chr 1
allele count: 1
allele frequency: 8.627383314640669e-6
allele num: 115910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-185C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.131G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-71C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.344C>T
  hgvsp: ENSP00000357324.5:p.Thr115Ile
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-71C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-71C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+538C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-159G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.344C>T
  hgvsp: ENSP00000384583.3:p.Thr115Ile
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-71C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-138C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.344C>T
  hgvsp: ENSP00000357323.5:p.Thr115Ile
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-252G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-138C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.128C>T
  hgvsp: ENSP00000295566.4:p.Thr43Ile
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.140C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+809C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59380G>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.162G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-71C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+809C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Thr115Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-155657917-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657917
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657917
    reference: chr 1
allele count: 1
allele frequency: 8.583248931385508e-6
allele num: 116506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58670C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-76G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-76G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.123G>A
  hgvsp: ENST00000295566.4:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-76G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-143G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.339G>A
  hgvsp: ENST00000368340.5:c.339G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-247C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+804G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-76G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.339G>A
  hgvsp: ENST00000368339.5:c.339G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-76G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+804G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.167C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-190G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.339G>A
  hgvsp: ENST00000405763.3:c.339G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-154C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-143G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-68G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+533G>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala113Ala
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

1-155657918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657918
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657918
    reference: chr 1
allele count: 2
allele frequency: 1.713649216005484e-5
allele num: 116710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.122C>T
  hgvsp: ENSP00000295566.4:p.Ala41Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-77C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+803C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-144C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.338C>T
  hgvsp: ENSP00000384583.3:p.Ala113Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-69C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-77C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-77C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58669G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+803C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+803C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-153G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.338C>T
  hgvsp: ENSP00000357323.5:p.Ala113Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-77C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.338C>T
  hgvsp: ENSP00000357324.5:p.Ala113Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-191C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+532C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-77C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.137G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-191C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala113Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-155657930-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657930
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657930
    reference: chr 1
allele count: 3
allele frequency: 2.551931812381973e-5
allele num: 117558
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-89G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.110G>C
  hgvsp: ENSP00000295566.4:p.Arg37Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-81G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-89G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.180C>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-89G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.326G>C
  hgvsp: ENSP00000357324.5:p.Arg109Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-234C>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.326G>C
  hgvsp: ENSP00000384583.3:p.Arg109Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-203G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-156G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.122G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-156G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-203G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.326G>C
  hgvsp: ENSP00000357323.5:p.Arg109Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.149C>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-89G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59362C>G
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+791G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+520G>C
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg109Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

1-155657930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657930
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657930
    reference: chr 1
allele count: 1
allele frequency: 8.506439374606578e-6
allele num: 117558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-89G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.326G>A
  hgvsp: ENSP00000384583.3:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.149C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.110G>A
  hgvsp: ENSP00000295566.4:p.Arg37Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.326G>A
  hgvsp: ENSP00000357324.5:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.122G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-156G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-81G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-156G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-89G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-141C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+791G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-89G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+791G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-89G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.326G>A
  hgvsp: ENSP00000357323.5:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+520G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59424C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-234C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.180C>T
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg109Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

1-155657931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657931
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657931
    reference: chr 1
allele count: 3
allele frequency: 2.550369803621525e-5
allele num: 117630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-90C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+790C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.150G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+790C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-90C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58656G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-90C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-82C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.121C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.325C>T
  hgvsp: ENSP00000357323.5:p.Arg109Trp
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-233G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.325C>T
  hgvsp: ENSP00000384583.3:p.Arg109Trp
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-90C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.109C>T
  hgvsp: ENSP00000295566.4:p.Arg37Trp
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.325C>T
  hgvsp: ENSP00000357324.5:p.Arg109Trp
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-204C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-140G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-90C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-157C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-90C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg109Trp
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

1-155657935-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657935
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657935
    reference: chr 1
allele count: 1
allele frequency: 8.490694199157722e-6
allele num: 117776
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58652C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-229C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-94G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.154C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-161G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-94G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-94G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-94G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.321G>A
  hgvsp: ENST00000368340.5:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.321G>A
  hgvsp: ENST00000405763.3:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.321G>A
  hgvsp: ENST00000368339.5:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59357C>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.105G>A
  hgvsp: ENST00000295566.4:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59419C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+515G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-136C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-94G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-208G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.185C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+786G>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly107Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

1-155657936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657936
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657936
    reference: chr 1
allele count: 1097
allele frequency: 9.325693688792165e-3
allele num: 117632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-228C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58651C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-95G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-95G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.155C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-162G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.320G>A
  hgvsp: ENSP00000384583.3:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.104G>A
  hgvsp: ENSP00000295566.4:p.Gly35Glu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-95G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.320G>A
  hgvsp: ENSP00000357323.5:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59356C>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59418C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-95G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-162G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.320G>A
  hgvsp: ENSP00000357324.5:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-135C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-95G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+785G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+785G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+785G>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly107Glu
num of homozygotes: 9
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-155657945-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657945
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657944
    reference: chr 1
allele count: 4
allele frequency: 3.406864832637765e-5
allele num: 117410
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.310delG
  hgvsp: ENSP00000357323.5:p.Val104TrpfsTer35
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-219delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.310delG
  hgvsp: ENSP00000357324.5:p.Val104TrpfsTer35
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-217delC
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-219delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+775delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-97delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+775delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-105delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-172delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-105delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.94delG
  hgvsp: ENSP00000295566.4:p.Val32TrpfsTer35
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+504delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-105delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59407delC
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-105delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-105delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.197delC
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-105delG
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.310delG
  hgvsp: ENSP00000384583.3:p.Val104TrpfsTer35
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Val104TrpfsTer35
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AC
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-155657947-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657947
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657947
    reference: chr 1
allele count: 11
allele frequency: 9.372071227741331e-5
allele num: 117370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-173G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.93G>C
  hgvsp: ENST00000295566.4:c.93G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-106G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-106G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-173G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59407C>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-220G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-106G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58640C>G
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59345C>G
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-124C>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-98G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.105G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-106G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-106G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+774G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-217C>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.309G>C
  hgvsp: ENST00000368339.5:c.309G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+774G>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.309G>C
  hgvsp: ENST00000368340.5:c.309G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.197C>G
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala103Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

1-155657952-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657952
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657952
    reference: chr 1
allele count: 1
allele frequency: 8.550516451193652e-6
allele num: 116952
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-212A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+769T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-178T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.100T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-111T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.88T>C
  hgvsp: ENSP00000295566.4:p.Ser30Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-225T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-111T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.304T>C
  hgvsp: ENSP00000357323.5:p.Ser102Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-225T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.304T>C
  hgvsp: ENSP00000357324.5:p.Ser102Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+498T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-111T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.304T>C
  hgvsp: ENSP00000384583.3:p.Ser102Pro
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-119A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59340A>G
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-178T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-111T>C
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.202A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.171A>G
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58635A>G
  variant of: http://identifiers.org/hgnc/29678
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser102Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/1-155657954-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657954
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657954
    reference: chr 1
allele count: 1
allele frequency: 8.555344523723971e-6
allele num: 116886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-113G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.86G>T
  hgvsp: ENSP00000295566.4:p.Gly29Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.302G>T
  hgvsp: ENSP00000384583.3:p.Gly101Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-117C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.302G>T
  hgvsp: ENSP00000357323.5:p.Gly101Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-210C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-180G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.204C>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-113G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-113G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-113G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+767G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.302G>T
  hgvsp: ENSP00000357324.5:p.Gly101Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59338C>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.98G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-113G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-180G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+767G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-227G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-227G>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58633C>A
  variant of: http://identifiers.org/hgnc/29678
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly101Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

1-155657956-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657956
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657956
    reference: chr 1
allele count: 1
allele frequency: 8.556808652644909e-6
allele num: 116866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-115G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.300G>A
  hgvsp: ENST00000405763.3:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-229G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58631C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-115C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-182G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-115G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-208C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.84G>A
  hgvsp: ENST00000295566.4:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-115G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-115G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-115G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.300G>A
  hgvsp: ENST00000368340.5:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.96G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59398C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+765G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-229G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-115G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.175C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+765G>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu100Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-155657963-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657963
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657963
    reference: chr 1
allele count: 1
allele frequency: 8.585017427585377e-6
allele num: 116482
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.182T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59329T>C
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-122A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-189A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-189A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+758A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+487A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-201T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59391T>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.213T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-122A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.293A>G
  hgvsp: ENSP00000357324.5:p.Lys98Arg
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.293A>G
  hgvsp: ENSP00000384583.3:p.Lys98Arg
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-122A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-122A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.77A>G
  hgvsp: ENSP00000295566.4:p.Lys26Arg
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+758A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-236A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.293A>G
  hgvsp: ENSP00000357323.5:p.Lys98Arg
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-108T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-236A>G
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys98Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

1-155657969-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657969
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657969
    reference: chr 1
allele count: 2
allele frequency: 1.724524462379499e-5
allele num: 115974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-102G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+752C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-128C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-128C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-128C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.219G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.287C>A
  hgvsp: ENSP00000384583.3:p.Pro96His
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-242C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59323G>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+752C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-195C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.287C>A
  hgvsp: ENSP00000357323.5:p.Pro96His
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.71C>A
  hgvsp: ENSP00000295566.4:p.Pro24His
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-128C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+752C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-120C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-195G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.287C>A
  hgvsp: ENSP00000357324.5:p.Pro96His
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.188G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-242C>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro96His
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

1-155657972-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657972
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657972
    reference: chr 1
allele count: 1
allele frequency: 8.655760408551892e-6
allele num: 115530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-131C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.284C>T
  hgvsp: ENSP00000384583.3:p.Pro95Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-198C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-131C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.284C>T
  hgvsp: ENSP00000357324.5:p.Pro95Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-131C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+749C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+749C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-123C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.68C>T
  hgvsp: ENSP00000295566.4:p.Pro23Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.284C>T
  hgvsp: ENSP00000357323.5:p.Pro95Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+478C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59382G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-131C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-131C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58615G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-198C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.80C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-131C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+749C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro95Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

1-155657975-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657975
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657975
    reference: chr 1
allele count: 1
allele frequency: 8.659808098652533e-6
allele num: 115476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-134C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-201C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-134C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.281C>T
  hgvsp: ENSP00000357324.5:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58612G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59317G>A
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.281C>T
  hgvsp: ENSP00000357323.5:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-96G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+475C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-126C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-201C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-134C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-248C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-134C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.65C>T
  hgvsp: ENSP00000295566.4:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+746C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-134C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-248C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-189G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.194G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.281C>T
  hgvsp: ENSP00000384583.3:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro94Leu
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-155657975-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657975
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657975
    reference: chr 1
allele count: 1
allele frequency: 8.659808098652533e-6
allele num: 115476
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.281C>A
  hgvsp: ENSP00000357323.5:p.Pro94Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-134C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-134C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-134C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.281C>A
  hgvsp: ENSP00000384583.3:p.Pro94Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59379G>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-201C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-134C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.225G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-248C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-201C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.65C>A
  hgvsp: ENSP00000295566.4:p.Pro22Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+746C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-189G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-96G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-248C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-134C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.281C>A
  hgvsp: ENSP00000357324.5:p.Pro94Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+746C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+746C>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro94Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

1-155657982-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657982
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657982
    reference: chr 1
allele count: 15
allele frequency: 1.308033067075936e-4
allele num: 114676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-141C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59372G>A
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+739C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-255C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.232G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.201G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-141C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-141C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.70C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.274C>T
  hgvsp: ENSP00000384583.3:p.Arg92Cys
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.58C>T
  hgvsp: ENSP00000295566.4:p.Arg20Cys
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-208C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.274C>T
  hgvsp: ENSP00000357324.5:p.Arg92Cys
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-89G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-141C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.274C>T
  hgvsp: ENSP00000357323.5:p.Arg92Cys
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-208C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-182G>A
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-141C>T
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-133C>T
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg92Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

1-155657982-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657982
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657982
    reference: chr 1
allele count: 1
allele frequency: 8.720220447172904e-6
allele num: 114676
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.274C>G
  hgvsp: ENSP00000357323.5:p.Arg92Gly
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-208C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.58C>G
  hgvsp: ENSP00000295566.4:p.Arg20Gly
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59372G>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-255C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-141C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-182G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.274C>G
  hgvsp: ENSP00000384583.3:p.Arg92Gly
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-141C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-255C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-141C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-141C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59310G>C
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.274C>G
  hgvsp: ENSP00000357324.5:p.Arg92Gly
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-208C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.232G>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-141C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+739C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.70C>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58605G>C
  variant of: http://identifiers.org/hgnc/29678
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg92Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

1-155657982-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657982
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657982
    reference: chr 1
allele count: 1
allele frequency: 8.720220447172904e-6
allele num: 114676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-141C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-141C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-255C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.232G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203761
  ensembl transcript: ENST00000538914
  gene symbol: MSTO2P
  hgvsc: ENST00000538914.1:n.267-59310G>T
  variant of: http://identifiers.org/hgnc/26329
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-208C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-141C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+468C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.274C>A
  hgvsp: ENSP00000384583.3:p.Arg92Ser
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-89G>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000355298
  ensembl transcript: ENST00000361831
  gene symbol: YY1AP1
  hgvsc: ENST00000361831.5:c.-255C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.58C>A
  hgvsp: ENSP00000295566.4:p.Arg20Ser
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-208C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+739C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.274C>A
  hgvsp: ENSP00000357324.5:p.Arg92Ser
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-141C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.274C>A
  hgvsp: ENSP00000357323.5:p.Arg92Ser
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+739C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+739C>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.201G>T
  variant of: http://identifiers.org/hgnc/2673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg92Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

1-155657990-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155657990
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155657990
    reference: chr 1
allele count: 5
allele frequency: 4.414855104455472e-5
allele num: 113254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000354716
  ensembl transcript: ENST00000361140
  gene symbol: YY1AP1
  hgvsc: ENST00000361140.4:c.-149G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-141G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.266G>A
  hgvsp: ENSP00000357323.5:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.62G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59364C>T
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-149G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-216G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+731G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476592
  ensembl transcript: ENST00000471642
  gene symbol: DAP3
  hgvsc: ENST00000471642.2:c.-88+7C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-181+7C>T
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-263G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+731G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.50G>A
  hgvsp: ENSP00000295566.4:p.Arg17Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+460G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.266G>A
  hgvsp: ENSP00000384583.3:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.266G>A
  hgvsp: ENSP00000357324.5:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-149G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000390116
  ensembl transcript: ENST00000436865
  gene symbol: YY1AP1
  hgvsc: ENST00000436865.1:c.-21+731G>A
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000413240
  ensembl transcript: ENST00000454523
  gene symbol: YY1AP1
  hgvsc: ENST00000454523.1:c.-149G>A
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg89Gln
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

1-155658003-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155658003
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155658003
    reference: chr 1
allele count: 1
allele frequency: 9.155999926752001e-6
allele num: 109218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000352134
  ensembl transcript: ENST00000359205
  gene symbol: YY1AP1
  hgvsc: ENST00000359205.5:c.-143-11A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000311138
  ensembl transcript: ENST00000311573
  gene symbol: YY1AP1
  hgvsc: ENST00000311573.5:c.-229A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000295566
  ensembl transcript: ENST00000295566
  gene symbol: YY1AP1
  hgvsc: ENST00000295566.4:c.48-11A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476093
  gene symbol: YY1AP1
  hgvsc: ENST00000476093.1:n.46+718A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000384583
  ensembl transcript: ENST00000405763
  gene symbol: YY1AP1
  hgvsc: ENST00000405763.3:c.253A>G
  hgvsp: ENSP00000384583.3:p.Ile85Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000461479
  gene symbol: DAP3
  hgvsc: ENST00000461479.1:n.233+20T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000444133
  ensembl transcript: ENST00000538143
  gene symbol: MSTO1
  hgvsc: ENST00000538143.1:c.291-58584T>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000346722
  ensembl transcript: ENST00000354691
  gene symbol: YY1AP1
  hgvsc: ENST00000354691.5:c.-151-11A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000347686
  ensembl transcript: ENST00000355499
  gene symbol: YY1AP1
  hgvsc: ENST00000355499.4:c.-151-11A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132676
  ensembl protein: ENSP00000476899
  ensembl transcript: ENST00000471214
  gene symbol: DAP3
  hgvsc: ENST00000471214.1:c.-181+20T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125459
  ensembl protein: ENSP00000440200
  ensembl transcript: ENST00000452804
  gene symbol: MSTO1
  hgvsc: ENST00000452804.2:c.561-59351T>C
  variant of: http://identifiers.org/hgnc/29678
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000316079
  ensembl transcript: ENST00000347088
  gene symbol: YY1AP1
  hgvsc: ENST00000347088.5:c.-21+447A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000409203
  ensembl transcript: ENST00000443231
  gene symbol: YY1AP1
  hgvsc: ENST00000443231.1:c.-265-11A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385791
  ensembl transcript: ENST00000407221
  gene symbol: YY1AP1
  hgvsc: ENST00000407221.1:c.-218-11A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000385390
  ensembl transcript: ENST00000404643
  gene symbol: YY1AP1
  hgvsc: ENST00000404643.1:c.-151-11A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl transcript: ENST00000476027
  gene symbol: YY1AP1
  hgvsc: ENST00000476027.1:n.60-11A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000387590
  ensembl transcript: ENST00000438245
  gene symbol: YY1AP1
  hgvsc: ENST00000438245.2:c.-162A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132676
  ensembl transcript: ENST00000479076
  gene symbol: DAP3
  hgvsc: ENST00000479076.1:n.202+20T>C
  variant of: http://identifiers.org/hgnc/2673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357314
  ensembl transcript: ENST00000368330
  gene symbol: YY1AP1
  hgvsc: ENST00000368330.2:c.-21+718A>G
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357323
  ensembl transcript: ENST00000368339
  gene symbol: YY1AP1
  hgvsc: ENST00000368339.5:c.253A>G
  hgvsp: ENSP00000357323.5:p.Ile85Val
  variant of: http://identifiers.org/hgnc/30935
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163374
  ensembl protein: ENSP00000357324
  ensembl transcript: ENST00000368340
  gene symbol: YY1AP1
  hgvsc: ENST00000368340.5:c.253A>G
  hgvsp: ENSP00000357324.5:p.Ile85Val
  variant of: http://identifiers.org/hgnc/30935
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ile85Val
num of homozygotes: 0
reference allele: T

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-20-28A>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.47-972A>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 7036
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 959
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3191
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11925
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 420
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3087
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9266
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 354
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2743
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 556
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4752
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11120
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1985
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 453
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3929
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10960
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4687
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5812
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23890
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5134
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.082e1

DP
type: SiteQuality
SIO_000300: 2.643393e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.75e-1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-20-30T>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-67077A>T
variant of: http://identifiers.org/hgnc/29678

GenotypeDepth
all individuals: 3122
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 453
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7034
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 556
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1985
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2743
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 9259
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 959
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4751
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11035
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3087
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 585
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11879
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23888
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5783
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5135
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10755
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3928
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

FS
type: SiteQuality
SIO_000300: 7.223e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 5.853e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.654e0

VQSLOD
type: SiteQuality
SIO_000300: -1.347e0

DP
type: SiteQuality
SIO_000300: 2.641023e6

QD
type: SiteQuality
SIO_000300: 1.612e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-67066T>C
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-12-985A>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 1903
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 959
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 466
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 453
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1984
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3387
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11326
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3086
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 75
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10024
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7023
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2743
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9169
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4749
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 556
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2848
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5078
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4670
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23883
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3917
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8739
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e0

QD
type: SiteQuality
SIO_000300: 1.761e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.397e0

VQSLOD
type: SiteQuality
SIO_000300: -1.108e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

DP
type: SiteQuality
SIO_000300: 2.621259e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-20-47T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-67060A>G
variant of: http://identifiers.org/hgnc/29678

GenotypeDepth
all individuals: 1890
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4749
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 469
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7016
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5203
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 556
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9072
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 453
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1984
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9107
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 958
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2742
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 92
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10524
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3087
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 333
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4997
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23881
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4651
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2763
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3914
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4856
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5774
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.707e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.44e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 2.042e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.372e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 8.474e0

DP
type: SiteQuality
SIO_000300: 2.606607e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357324
ensembl transcript: ENST00000368340
gene symbol: YY1AP1
hgvsc: ENST00000368340.5:c.395-51A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-12-995A>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 958
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3086
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1984
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 9047
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 454
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10370
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7014
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1886
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2742
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9141
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5349
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4750
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 556
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3915
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2758
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4825
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5000
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4654
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23880
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.785697755149271e-4
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.284e1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

DP
type: SiteQuality
SIO_000300: 2.60488e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 2.991e0

VQSLOD
type: SiteQuality
SIO_000300: 9.429999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+909G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000384583
ensembl transcript: ENST00000405763
gene symbol: YY1AP1
hgvsc: ENST00000405763.3:c.394+50G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-88+50G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.31C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+909G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-21+50G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 14367
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 90
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3613
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2166
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1840
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1027
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 290
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24755
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4119
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 454
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7040
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2546
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2086
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1489
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34000
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.100594320933304e-4
allele num: 9086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026694045174538e-4
allele num: 9740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63016
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 5.909e0

QD
type: SiteQuality
SIO_000300: 8.98e0

MQ
type: SiteQuality
SIO_000300: 4.458e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.304e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: -2.758e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

DP
type: SiteQuality
SIO_000300: 1.442959e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-13+45T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.190+45T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357324
ensembl transcript: ENST00000368340
gene symbol: YY1AP1
hgvsc: ENST00000368340.5:c.394+45T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000347686
ensembl transcript: ENST00000355499
gene symbol: YY1AP1
hgvsc: ENST00000355499.4:c.-21+45T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385390
ensembl transcript: ENST00000404643
gene symbol: YY1AP1
hgvsc: ENST00000404643.1:c.-21+45T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000384583
ensembl transcript: ENST00000405763
gene symbol: YY1AP1
hgvsc: ENST00000405763.3:c.394+45T>C
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25023
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3577
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 452
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1795
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2217
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15656
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6972
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2698
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 290
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1010
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6133
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2734
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37325
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.753501400560224e-5
allele num: 11424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63078
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

QD
type: SiteQuality
SIO_000300: 7.88e0

MQ
type: SiteQuality
SIO_000300: 4.38e1

VQSLOD
type: SiteQuality
SIO_000300: -2.087e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.451126e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.190+21C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+880C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+880C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-135+21C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-21+21C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-13+21C>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 57
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7171
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 905
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26518
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17517
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2384
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3319
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1023
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 292
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 39
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 150
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2143
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41352
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3048
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.743983048167241e-5
allele num: 63238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e0

DP
type: SiteQuality
SIO_000300: 1.493064e6

FS
type: SiteQuality
SIO_000300: 7.607e0

VQSLOD
type: SiteQuality
SIO_000300: -6.623e-1

MQ
type: SiteQuality
SIO_000300: 5.134e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+877G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000311138
ensembl transcript: ENST00000311573
gene symbol: YY1AP1
hgvsc: ENST00000311573.5:c.-88+18G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357324
ensembl transcript: ENST00000368340
gene symbol: YY1AP1
hgvsc: ENST00000368340.5:c.394+18G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58743C>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000347686
ensembl transcript: ENST00000355499
gene symbol: YY1AP1
hgvsc: ENST00000355499.4:c.-21+18G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-88+18G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 290
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 454
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 856
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2128
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1025
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3510
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7190
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 26664
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17539
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41516
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6226
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 281
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3247
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5803280761086e-5
allele num: 63278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.088e1

FS
type: SiteQuality
SIO_000300: 3.902e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.98e-1

QD
type: SiteQuality
SIO_000300: 1.302e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.491e0

DP
type: SiteQuality
SIO_000300: 1.497201e6

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.44e-1

Annotation
canonical: true
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357323
ensembl transcript: ENST00000368339
gene symbol: YY1AP1
hgvsc: ENST00000368339.5:c.394+17G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.190+17G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58742C>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-88+17G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-21+17G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+876G>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 3557
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 297
bin: 4.75e1
variant carriers: 13

GenotypeDepth
all individuals: 49
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 1020
bin: 3.75e1
variant carriers: 12

GenotypeDepth
all individuals: 60
bin: 7.25e1
variant carriers: 8

GenotypeDepth
all individuals: 163
bin: 5.75e1
variant carriers: 15

GenotypeDepth
all individuals: 460
bin: 4.25e1
variant carriers: 15

GenotypeDepth
all individuals: 2060
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 249
bin: 5.25e1
variant carriers: 15

GenotypeDepth
all individuals: 41
bin: 7.75e1
variant carriers: 3

GenotypeDepth
all individuals: 17528
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 106
bin: 6.25e1
variant carriers: 16

GenotypeDepth
all individuals: 227
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 851
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 26661
bin: 2.75e1
variant carriers: 6

GenotypeDepth
all individuals: 64
bin: 6.75e1
variant carriers: 8

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 8.25e1
variant carriers: 8

GenotypeDepth
all individuals: 7170
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41597
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3333
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1886
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1785
bin: 9.75e1
variant carriers: 131

GenotypeQuality
all individuals: 694
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.158759239370775e-5
allele num: 63316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 130
allele frequency: 1.521535580524345e-2
allele num: 8544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9376
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.191e1

VQSLOD
type: SiteQuality
SIO_000300: -4.094e-1

FS
type: SiteQuality
SIO_000300: 2.035e0

MQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.456e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

DP
type: SiteQuality
SIO_000300: 1.501403e6

MQ
type: SiteQuality
SIO_000300: 5.072e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357324
ensembl transcript: ENST00000368340
gene symbol: YY1AP1
hgvsc: ENST00000368340.5:c.394+10A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-21+10A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357323
ensembl transcript: ENST00000368339
gene symbol: YY1AP1
hgvsc: ENST00000368339.5:c.394+10A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000311138
ensembl transcript: ENST00000311573
gene symbol: YY1AP1
hgvsc: ENST00000311573.5:c.-88+10A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000347686
ensembl transcript: ENST00000355499
gene symbol: YY1AP1
hgvsc: ENST00000355499.4:c.-21+10A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-219T>C
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 795
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26815
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 446
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17705
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1604
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1014
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7206
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 282
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3897
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6246
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42018
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57743635044326e-5
allele num: 63394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.018e0

DP
type: SiteQuality
SIO_000300: 1.503616e6

FS
type: SiteQuality
SIO_000300: 3.864e0

QD
type: SiteQuality
SIO_000300: 1.08e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.485e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

MQ
type: SiteQuality
SIO_000300: 5.329e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.104C>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+867G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-310C>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-21+8G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+867G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-217C>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58733C>G
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.73C>G
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 446
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26842
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3961
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1490
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17716
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1013
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7207
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 813
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 90
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42043
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3762
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57693884631154e-5
allele num: 63414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.505082e6

MQ
type: SiteQuality
SIO_000300: 5.294e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e-1

FS
type: SiteQuality
SIO_000300: 1.237e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.323e1

VQSLOD
type: SiteQuality
SIO_000300: -1.061e0

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-21+5G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58730C>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.76C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59497C>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59435C>T
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-13+5G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+864G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-88+5G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 446
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4089
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 841
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1285
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7212
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17745
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26871
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1012
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6252
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3884
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42095
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 294
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.032417922775139e-4
allele num: 9686
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.59e0

QD
type: SiteQuality
SIO_000300: 7.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.223e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.705e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.487e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 1.507328e6

Annotation
canonical: false
consequence: splice_donor_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385390
ensembl transcript: ENST00000404643
gene symbol: YY1AP1
hgvsc: ENST00000404643.1:c.-21+1G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58726C>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.111C>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: splice_donor_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-135+1G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+860G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: splice_donor_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-21+1G>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 1071
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 910
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4146
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26923
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7218
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1011
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17759
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4059
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6258
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42168
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.012350678274954e-4
allele num: 9878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.510451e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.554e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

QD
type: SiteQuality
SIO_000300: 1.014e1

FS
type: SiteQuality
SIO_000300: 1.164e0

VQSLOD
type: SiteQuality
SIO_000300: -2.655e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.736e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e0

MQ
type: SiteQuality
SIO_000300: 5.308e1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-206_-205delGT
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-90_-89delAC
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-15_-14delAC
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59427_267-59426delGT
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+586_-21+587delAC
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-23_-22delAC
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.115_116delGT
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+857_-21+858delAC
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 91
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 947
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 17745
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 212
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7222
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26936
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 284
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1019
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4133
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 448
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1015
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6259
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42160
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4051
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1361
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.296039790971479e-5
allele num: 63532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

MQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

QD
type: SiteQuality
SIO_000300: 1.643e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

FS
type: SiteQuality
SIO_000300: 3.225e0

MQ
type: SiteQuality
SIO_000300: 5.348e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

DP
type: SiteQuality
SIO_000300: 1.511635e6

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000311138
ensembl transcript: ENST00000311573
gene symbol: YY1AP1
hgvsc: ENST00000311573.5:c.-91C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-24C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-24C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-24C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.84G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+856C>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 26981
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1015
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4191
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7221
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 982
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 855
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 225
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 447
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 282
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17764
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6267
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42204
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.003613006824568e-4
allele num: 9964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.68e-1

DP
type: SiteQuality
SIO_000300: 1.51381e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.171e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.016e0

VQSLOD
type: SiteQuality
SIO_000300: -1.578e0

QD
type: SiteQuality
SIO_000300: 1.035e1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-139A>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59426T>A
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.116T>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+855A>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+584A>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-17A>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+855A>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 89
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4202
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 447
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 985
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 223
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7217
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 822
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 52
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17775
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1015
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26999
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4183
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6268
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42257
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1661
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.926187671770711e-4
allele num: 10188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

DP
type: SiteQuality
SIO_000300: 1.514132e6

FS
type: SiteQuality
SIO_000300: 3.173e0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -1.36e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.14e-1

QD
type: SiteQuality
SIO_000300: 1.011e1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-295G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58718G>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.119G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-28C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+581C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385390
ensembl transcript: ENST00000404643
gene symbol: YY1AP1
hgvsc: ENST00000404643.1:c.-28C>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 89
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7232
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 662
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27030
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 251
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1057
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17821
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 447
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4178
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1016
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6270
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42348
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57035175879397e-5
allele num: 63680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.517269e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.404e0

MQ
type: SiteQuality
SIO_000300: 5.532e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 1.067e0

VQSLOD
type: SiteQuality
SIO_000300: -2.209e0

QD
type: SiteQuality
SIO_000300: 1.038e1

MQRankSum
type: SiteQuality
SIO_000300: 8.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.565e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-22C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+850C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+850C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-30C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+850C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59421G>A
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58716G>A
variant of: http://identifiers.org/hgnc/29678

GenotypeDepth
all individuals: 45
bin: 7.75e1
variant carriers: 9

GenotypeDepth
all individuals: 23
bin: 8.75e1
variant carriers: 11

GenotypeDepth
all individuals: 100
bin: 6.25e1
variant carriers: 13

GenotypeDepth
all individuals: 247
bin: 5.25e1
variant carriers: 20

GenotypeDepth
all individuals: 4141
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 17795
bin: 2.25e1
variant carriers: 9

GenotypeDepth
all individuals: 26990
bin: 2.75e1
variant carriers: 7

GenotypeDepth
all individuals: 73
bin: 6.75e1
variant carriers: 18

GenotypeDepth
all individuals: 158
bin: 5.75e1
variant carriers: 15

GenotypeDepth
all individuals: 1003
bin: 3.75e1
variant carriers: 14

GenotypeDepth
all individuals: 7202
bin: 3.25e1
variant carriers: 11

GenotypeDepth
all individuals: 1085
bin: 1.25e1
variant carriers: 5

GenotypeDepth
all individuals: 620
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 266
bin: 1.75e1
variant carriers: 5

GenotypeDepth
all individuals: 61
bin: 7.25e1
variant carriers: 12

GenotypeDepth
all individuals: 23
bin: 9.25e1
variant carriers: 7

GenotypeDepth
all individuals: 305
bin: 4.75e1
variant carriers: 32

GenotypeDepth
all individuals: 39
bin: 8.25e1
variant carriers: 14

GenotypeDepth
all individuals: 70
bin: 9.75e1
variant carriers: 32

GenotypeDepth
all individuals: 449
bin: 4.25e1
variant carriers: 12

GenotypeQuality
all individuals: 609
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42329
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1342
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 9.75e1
variant carriers: 247

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4222
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 9
allele frequency: 7.846556233653008e-4
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

African
type: Population
allele count: 236
allele frequency: 2.363308632084919e-2
allele num: 9986
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.137845555241771e-5
allele num: 63738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.316e0

MQ
type: SiteQuality
SIO_000300: 5.51e1

FS
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

DP
type: SiteQuality
SIO_000300: 1.52537e6

QD
type: SiteQuality
SIO_000300: 1.225e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.14e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+849C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-31C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-145C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.180C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59482G>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+578C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58715G>A
variant of: http://identifiers.org/hgnc/29678

GenotypeDepth
all individuals: 267
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17847
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1098
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4123
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7230
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 592
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 440
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27123
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 996
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 154
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42523
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4222
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6278
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165229550221394e-4
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.101e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.135e-1

MQ
type: SiteQuality
SIO_000300: 5.682e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 3.117e0

DP
type: SiteQuality
SIO_000300: 1.518136e6

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-291C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+848G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.123C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-146G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-24G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-32G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 293
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 441
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27125
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1124
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17852
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 562
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7235
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4086
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 998
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6281
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.716875871687587e-5
allele num: 11472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10680
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.136e0

FS
type: SiteQuality
SIO_000300: 2.675e0

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

MQ
type: SiteQuality
SIO_000300: 5.73e1

QD
type: SiteQuality
SIO_000300: 1.401e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.519039e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.151e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59415G>C
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-103C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+844C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+573C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-36C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000311138
ensembl transcript: ENST00000311573
gene symbol: YY1AP1
hgvsc: ENST00000311573.5:c.-103C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-36C>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4002
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 442
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 277
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 17886
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1198
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27178
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 440
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7245
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 995
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4193
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6262
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42516
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.131458633431452e-5
allele num: 63868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

MQ
type: SiteQuality
SIO_000300: 5.782e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.522109e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.494e0

QD
type: SiteQuality
SIO_000300: 2.339e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+831T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.162T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59464A>G
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-274A>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+831T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-49T>C
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 429
bin: 1.75e1
variant carriers: 25

GenotypeDepth
all individuals: 88
bin: 7.25e1
variant carriers: 40

GenotypeDepth
all individuals: 1313
bin: 1.25e1
variant carriers: 15

GenotypeDepth
all individuals: 267
bin: 5.25e1
variant carriers: 57

GenotypeDepth
all individuals: 27118
bin: 2.75e1
variant carriers: 28

GenotypeDepth
all individuals: 18159
bin: 2.25e1
variant carriers: 28

GenotypeDepth
all individuals: 66
bin: 7.75e1
variant carriers: 33

GenotypeDepth
all individuals: 282
bin: 4.75e1
variant carriers: 28

GenotypeDepth
all individuals: 61
bin: 8.25e1
variant carriers: 38

GenotypeDepth
all individuals: 101
bin: 6.75e1
variant carriers: 46

GenotypeDepth
all individuals: 7182
bin: 3.25e1
variant carriers: 31

GenotypeDepth
all individuals: 281
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3462
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 89
bin: 9.75e1
variant carriers: 64

GenotypeDepth
all individuals: 966
bin: 3.75e1
variant carriers: 37

GenotypeDepth
all individuals: 127
bin: 6.25e1
variant carriers: 44

GenotypeDepth
all individuals: 184
bin: 5.75e1
variant carriers: 53

GenotypeDepth
all individuals: 35
bin: 9.25e1
variant carriers: 24

GenotypeDepth
all individuals: 457
bin: 4.25e1
variant carriers: 56

GenotypeDepth
all individuals: 35
bin: 8.75e1
variant carriers: 23

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6212
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 301
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 9.75e1
variant carriers: 659

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 235
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3816
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 353
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1315
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42843
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1453
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 27
allele frequency: 2.349869451697128e-3
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.185246464583398e-4
allele num: 64066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.554502369668246e-3
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 28
allele frequency: 2.295458271847844e-3
allele num: 12198
num of homozygotes: 3

African
type: Population
allele count: 633
allele frequency: 6.32494004796163e-2
allele num: 10008
num of homozygotes: 32

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.38e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

QD
type: SiteQuality
SIO_000300: 1.33e1

MQ
type: SiteQuality
SIO_000300: 5.553e1

DP
type: SiteQuality
SIO_000300: 1.549476e6

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.157C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-121C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59397G>A
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-46C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-168C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-269G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385390
ensembl transcript: ENST00000404643
gene symbol: YY1AP1
hgvsc: ENST00000404643.1:c.-54C>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 88
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 946
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 498
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3258
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1405
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27430
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18349
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 407
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7256
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43197
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6313
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560305819940709e-5
allele num: 64090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.584e1

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.102e-1

DP
type: SiteQuality
SIO_000300: 1.530492e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

QD
type: SiteQuality
SIO_000300: 1.125e1

FS
type: SiteQuality
SIO_000300: 6.974e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.575e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-176G>C
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-168C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-121C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.145G>C
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.114G>C
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+826C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+826C>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 59
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3258
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 946
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18349
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27430
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7256
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 498
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 407
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1405
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43197
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560305819940709e-5
allele num: 64090
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.530492e6

MQ
type: SiteQuality
SIO_000300: 5.584e1

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

QD
type: SiteQuality
SIO_000300: 1.125e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

FS
type: SiteQuality
SIO_000300: 6.974e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.575e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.102e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+823C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-57C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.117G>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59456G>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-57C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-171C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-266G>T
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 7256
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 944
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18510
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3115
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1415
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 496
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 406
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27420
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 23
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 59
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3611
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6317
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.707723138584863e-5
allele num: 12974
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557972143458075e-5
allele num: 64186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.454e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.96e0

DP
type: SiteQuality
SIO_000300: 1.532688e6

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 6.351e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.542e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQ
type: SiteQuality
SIO_000300: 5.682e1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-58A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58688T>C
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-125A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+822A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+822A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-172T>C
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-172A>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 50
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3077
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27450
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7253
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 496
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 407
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1420
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 945
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18526
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1327
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3571
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1461
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43394
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55850632753569e-5
allele num: 64164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.007e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

DP
type: SiteQuality
SIO_000300: 1.533559e6

MQ
type: SiteQuality
SIO_000300: 5.686e1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-60T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59453A>G
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-263A>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59391A>G
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+820T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000295566
ensembl transcript: ENST00000295566
gene symbol: YY1AP1
hgvsc: ENST00000295566.4:c.139T>C
hgvsp: ENSP00000295566.4:p.Ser47Pro
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.120A>G
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 27270
bin: 2.75e1
variant carriers: 33

GenotypeDepth
all individuals: 93
bin: 6.75e1
variant carriers: 42

GenotypeDepth
all individuals: 18451
bin: 2.25e1
variant carriers: 26

GenotypeDepth
all individuals: 387
bin: 4.25e1
variant carriers: 52

GenotypeDepth
all individuals: 911
bin: 3.75e1
variant carriers: 56

GenotypeDepth
all individuals: 214
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 137
bin: 6.25e1
variant carriers: 66

GenotypeDepth
all individuals: 70
bin: 8.25e1
variant carriers: 49

GenotypeDepth
all individuals: 2984
bin: 7.5e0
variant carriers: 3

GenotypeDepth
all individuals: 67
bin: 7.75e1
variant carriers: 36

GenotypeDepth
all individuals: 51
bin: 8.75e1
variant carriers: 39

GenotypeDepth
all individuals: 7139
bin: 3.25e1
variant carriers: 40

GenotypeDepth
all individuals: 144
bin: 9.75e1
variant carriers: 118

GenotypeDepth
all individuals: 160
bin: 5.75e1
variant carriers: 45

GenotypeDepth
all individuals: 104
bin: 7.25e1
variant carriers: 59

GenotypeDepth
all individuals: 1442
bin: 1.25e1
variant carriers: 11

GenotypeDepth
all individuals: 513
bin: 1.75e1
variant carriers: 12

GenotypeDepth
all individuals: 237
bin: 5.25e1
variant carriers: 54

GenotypeDepth
all individuals: 280
bin: 4.75e1
variant carriers: 72

GenotypeDepth
all individuals: 46
bin: 9.25e1
variant carriers: 37

GenotypeQuality
all individuals: 208
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 43331
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6228
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 9.75e1
variant carriers: 838

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 630
allele frequency: 9.814307078763709e-3
allele num: 64192
num of homozygotes: 6

South Asian
type: Population
allele count: 11
allele frequency: 8.314436885865457e-4
allele num: 13230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 136
allele frequency: 2.075702075702076e-2
allele num: 6552
num of homozygotes: 1

Latino
type: Population
allele count: 18
allele frequency: 1.565762004175365e-3
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 52
allele frequency: 5.236656596173212e-3
allele num: 9930
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.882352941176471e-3
allele num: 850
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.53e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.73e-1

MQ
type: SiteQuality
SIO_000300: 5.472e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.08e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.560154e6

QD
type: SiteQuality
SIO_000300: 1.182e1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-166A>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+816T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.124A>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.147T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.155A>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000384583
ensembl transcript: ENST00000405763
gene symbol: YY1AP1
hgvsc: ENST00000405763.3:c.351T>C
hgvsp: ENST00000405763.3:c.351T>C(p.%3D)
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 1511
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 532
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27642
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7263
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2812
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18729
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 868
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6314
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43948
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3388
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 300
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557875058420315e-5
allele num: 64190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13656
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.530679e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.345e0

FS
type: SiteQuality
SIO_000300: 9.318e0

MQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

QD
type: SiteQuality
SIO_000300: 1.076e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

MQ
type: SiteQuality
SIO_000300: 5.677e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+815C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000347686
ensembl transcript: ENST00000355499
gene symbol: YY1AP1
hgvsc: ENST00000355499.4:c.-65C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-132C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59448G>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+815C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.146C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.125G>A
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27633
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18770
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 865
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1515
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2758
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 552
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 337
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 213
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7269
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1206
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1466
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3343
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.114973678472417e-5
allele num: 64206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.447e-1

FS
type: SiteQuality
SIO_000300: 5.038e0

MQ
type: SiteQuality
SIO_000300: 5.43e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.583e0

DP
type: SiteQuality
SIO_000300: 1.531366e6

QD
type: SiteQuality
SIO_000300: 3.88e0

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 27633
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 552
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2758
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1515
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 213
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 337
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18770
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 47
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7269
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 865
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3343
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1206
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64206
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.010509296685529e-4
allele num: 9896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.583e0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

FS
type: SiteQuality
SIO_000300: 5.038e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.94e-1

DP
type: SiteQuality
SIO_000300: 1.531366e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 5.43e1

QD
type: SiteQuality
SIO_000300: 3.88e0

VQSLOD
type: SiteQuality
SIO_000300: -1.447e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.144C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59446G>C
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-67C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385390
ensembl transcript: ENST00000404643
gene symbol: YY1AP1
hgvsc: ENST00000404643.1:c.-67C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.158G>C
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-134C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+813C>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 55
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7288
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2651
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 18750
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 613
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1573
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27615
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 867
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 210
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43711
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557389814670612e-5
allele num: 64210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13942
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.531908e6

FS
type: SiteQuality
SIO_000300: 3.781e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.276e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

MQ
type: SiteQuality
SIO_000300: 5.748e1

QD
type: SiteQuality
SIO_000300: 1.606e1

VQSLOD
type: SiteQuality
SIO_000300: -3.017e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59383G>A
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-68C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.143C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-68C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-162G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+541C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-135C>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 27630
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 590
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 338
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 865
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1564
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7288
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2608
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18819
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43915
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14022
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.322340919647004e-4
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.823e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 5.09e-1

DP
type: SiteQuality
SIO_000300: 1.532858e6

MQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.247e0

MQ
type: SiteQuality
SIO_000300: 5.594e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

QD
type: SiteQuality
SIO_000300: 1.063e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+809C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-71C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58675G>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-185C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-63C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59442G>A
variant of: http://identifiers.org/hgnc/29678

GenotypeDepth
all individuals: 18954
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27602
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7254
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1578
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 638
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2482
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 854
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 338
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43879
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 317
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6328
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64296
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.01419878296146e-4
allele num: 9860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-1

DP
type: SiteQuality
SIO_000300: 1.533586e6

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 5.27e0

MQ
type: SiteQuality
SIO_000300: 5.492e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59437C>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59375C>T
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.136C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-76G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+804G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-190G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.135G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 722
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1616
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19051
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2163
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 336
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 225
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 848
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7256
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27700
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6346
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 206
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2922
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551686683424883e-5
allele num: 64446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.91e-1

FS
type: SiteQuality
SIO_000300: 6.216e0

VQSLOD
type: SiteQuality
SIO_000300: -1.343e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.537823e6

MQ
type: SiteQuality
SIO_000300: 5.53e1

QD
type: SiteQuality
SIO_000300: 1.285e1

MQRankSum
type: SiteQuality
SIO_000300: 3.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-144C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59436G>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59374G>A
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-77C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-246G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.134C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.168G>A
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 19133
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1585
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 71
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2063
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 337
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 27769
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 219
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 690
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 848
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7273
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2830
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6355
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44277
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550579916888916e-5
allele num: 64492
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14942
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.929e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.262e0

MQ
type: SiteQuality
SIO_000300: 5.584e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.483e0

DP
type: SiteQuality
SIO_000300: 1.540348e6

QD
type: SiteQuality
SIO_000300: 3.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+791G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59424C>G
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-141C>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+791G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58657C>G
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385390
ensembl transcript: ENST00000404643
gene symbol: YY1AP1
hgvsc: ENST00000404643.1:c.-89G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000347686
ensembl transcript: ENST00000355499
gene symbol: YY1AP1
hgvsc: ENST00000355499.4:c.-89G>C
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7222
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 212
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 779
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1597
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 836
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 27808
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19461
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1626
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 453
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.890835749401235e-4
allele num: 15866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

FS
type: SiteQuality
SIO_000300: 5.600000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.309e0

MQ
type: SiteQuality
SIO_000300: 5.612e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.96e-1

DP
type: SiteQuality
SIO_000300: 1.545617e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

QD
type: SiteQuality
SIO_000300: 9.5e0

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59362C>T
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-89G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-203G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58657C>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-89G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-203G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+791G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 779
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 237
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7222
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 836
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19461
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1626
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1597
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 212
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27808
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

QD
type: SiteQuality
SIO_000300: 9.5e0

FS
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.612e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.309e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 1.545617e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-204C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+790C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59423G>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-157C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+519C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59361G>A
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.181G>A
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 335
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7221
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 247
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 831
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27758
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1622
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19514
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1579
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6321
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.102378490175801e-4
allele num: 9670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15964
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.733e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 1.744e0

QD
type: SiteQuality
SIO_000300: 1.156e1

MQ
type: SiteQuality
SIO_000300: 5.567e1

DP
type: SiteQuality
SIO_000300: 1.54528e6

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-86G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.117G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+786G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-208G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000311138
ensembl transcript: ENST00000311573
gene symbol: YY1AP1
hgvsc: ENST00000311573.5:c.-161G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385390
ensembl transcript: ENST00000404643
gene symbol: YY1AP1
hgvsc: ENST00000404643.1:c.-94G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+786G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1665
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 335
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 27720
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19538
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 834
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1510
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 835
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7215
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 240
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44355
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2504
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6348
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1529
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.035840066293764e-4
allele num: 9654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.798e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.763e1

DP
type: SiteQuality
SIO_000300: 1.545284e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

QD
type: SiteQuality
SIO_000300: 7.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.608e0

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-209G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-87G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.186C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+514G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.116G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-209G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-95G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 109
bin: 6.75e1
variant carriers: 69

GenotypeDepth
all individuals: 1545
bin: 7.5e0
variant carriers: 7

GenotypeDepth
all individuals: 61
bin: 8.25e1
variant carriers: 41

GenotypeDepth
all individuals: 172
bin: 5.75e1
variant carriers: 85

GenotypeDepth
all individuals: 59
bin: 9.75e1
variant carriers: 33

GenotypeDepth
all individuals: 77
bin: 7.75e1
variant carriers: 47

GenotypeDepth
all individuals: 24
bin: 9.25e1
variant carriers: 16

GenotypeDepth
all individuals: 281
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 19300
bin: 2.25e1
variant carriers: 33

GenotypeDepth
all individuals: 7116
bin: 3.25e1
variant carriers: 88

GenotypeDepth
all individuals: 109
bin: 7.25e1
variant carriers: 74

GenotypeDepth
all individuals: 1747
bin: 1.25e1
variant carriers: 14

GenotypeDepth
all individuals: 140
bin: 6.25e1
variant carriers: 87

GenotypeDepth
all individuals: 27449
bin: 2.75e1
variant carriers: 41

GenotypeDepth
all individuals: 767
bin: 3.75e1
variant carriers: 89

GenotypeDepth
all individuals: 915
bin: 1.75e1
variant carriers: 30

GenotypeDepth
all individuals: 46
bin: 8.75e1
variant carriers: 35

GenotypeDepth
all individuals: 327
bin: 4.25e1
variant carriers: 108

GenotypeDepth
all individuals: 197
bin: 5.25e1
variant carriers: 79

GenotypeDepth
all individuals: 256
bin: 4.75e1
variant carriers: 120

GenotypeQuality
all individuals: 314
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1481
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 150
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 177
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1813
bin: 9.75e1
variant carriers: 1080

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 419
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 134
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43666
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2546
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6212
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 5.25e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 939
allele frequency: 1.455813953488372e-2
allele num: 64500
num of homozygotes: 8

Other
type: Population
allele count: 10
allele frequency: 1.15473441108545e-2
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 2.711722987067167e-3
allele num: 9588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 32
allele frequency: 4.933703361085414e-3
allele num: 6486
num of homozygotes: 0

Latino
type: Population
allele count: 50
allele frequency: 4.363763309478094e-3
allele num: 11458
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 39
allele frequency: 2.414262721307416e-3
allele num: 16154
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.075e0

VQSLOD
type: SiteQuality
SIO_000300: 4.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.362e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

DP
type: SiteQuality
SIO_000300: 1.562292e6

MQ
type: SiteQuality
SIO_000300: 5.651e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.106delG
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-172delG
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59345delC
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58640delC
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.166delC
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+775delG
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-124delC
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 27883
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 219
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19516
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 685
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 310
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7094
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1612
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1840
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2726
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6291
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.221033313633395e-5
allele num: 64298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.75e-1

DP
type: SiteQuality
SIO_000300: 1.528355e6

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.408e1

FS
type: SiteQuality
SIO_000300: 4.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.97e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+503G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000384583
ensembl transcript: ENST00000405763
gene symbol: YY1AP1
hgvsc: ENST00000405763.3:c.309G>C
hgvsp: ENST00000405763.3:c.309G>C(p.%3D)
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.166C>G
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+774G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-220G>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-106G>C
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 137
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 19466
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1870
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 7100
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 27846
bin: 2.75e1
variant carriers: 2

GenotypeDepth
all individuals: 683
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 981
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1625
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 327
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 385
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2785
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44418
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6282
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.159224936815501e-4
allele num: 9496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.24494242141301e-4
allele num: 64260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.414e0

MQ
type: SiteQuality
SIO_000300: 4.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.094e1

VQSLOD
type: SiteQuality
SIO_000300: -1.803e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

DP
type: SiteQuality
SIO_000300: 1.52767e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

FS
type: SiteQuality
SIO_000300: 2.616e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.77e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59402A>G
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+769T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-111T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-103T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-111T>C
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+769T>C
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 670
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1939
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27700
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 400
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 967
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1726
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19507
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7003
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44273
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2854
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563232765358762e-5
allele num: 63970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.99e0

VQSLOD
type: SiteQuality
SIO_000300: -1.125e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.563e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 1.521938e6

FS
type: SiteQuality
SIO_000300: 4.518e0

MQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+496G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-105G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+767G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-113G>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59400C>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.173C>A
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1910
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19531
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6998
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 415
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 670
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27675
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 956
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1755
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44345
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 484
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9328
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.681e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.446e0

FS
type: SiteQuality
SIO_000300: 2.527e0

MQ
type: SiteQuality
SIO_000300: 5.713e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.156e0

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

QD
type: SiteQuality
SIO_000300: 1.142e1

DP
type: SiteQuality
SIO_000300: 1.521411e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+494G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.206C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59336C>T
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+765G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-107G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: synonymous_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357323
ensembl transcript: ENST00000368339
gene symbol: YY1AP1
hgvsc: ENST00000368339.5:c.300G>A
hgvsp: ENST00000368339.5:c.300G>A(p.%3D)
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-182G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 671
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1927
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6987
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27684
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19524
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 420
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1781
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 213
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 919
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 136
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 462
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6175
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63920
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.113964294448521e-5
allele num: 16356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

MQ
type: SiteQuality
SIO_000300: 5.846e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.335e0

DP
type: SiteQuality
SIO_000300: 1.520739e6

FS
type: SiteQuality
SIO_000300: 9.986000000000001e0

QD
type: SiteQuality
SIO_000300: 1.839e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.237e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.89A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58624T>C
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-122A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385390
ensembl transcript: ENST00000404643
gene symbol: YY1AP1
hgvsc: ENST00000404643.1:c.-122A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+758A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-114A>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6879
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1947
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1957
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 652
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27554
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19695
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 768
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1416
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6104
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 255
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570253124803718e-5
allele num: 63684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 6.219e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.69e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.19e-1

DP
type: SiteQuality
SIO_000300: 1.515787e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 1.102e1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000347686
ensembl transcript: ENST00000355499
gene symbol: YY1AP1
hgvsc: ENST00000355499.4:c.-128C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-195C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.83C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58618G>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+481C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-128C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59385G>T
variant of: http://identifiers.org/hgnc/29678

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19636
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 531
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 755
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27420
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1981
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6851
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2087
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 641
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44485
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.76273576590869e-4
allele num: 11346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.510651e6

VQSLOD
type: SiteQuality
SIO_000300: -1.93e0

FS
type: SiteQuality
SIO_000300: 3.952e0

QD
type: SiteQuality
SIO_000300: 1.277e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

MQ
type: SiteQuality
SIO_000300: 5.837e1

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59320G>A
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000409203
ensembl transcript: ENST00000443231
gene symbol: YY1AP1
hgvsc: ENST00000443231.1:c.-245C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.191G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-99G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.222G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-192G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-245C>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 203
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2232
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19513
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2024
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27326
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 572
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 640
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6799
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 789
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43959
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3247
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110975311659741e-5
allele num: 16364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.4604e1

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

DP
type: SiteQuality
SIO_000300: 1.505938e6

VQSLOD
type: SiteQuality
SIO_000300: -2.126e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.932e0

QD
type: SiteQuality
SIO_000300: 1.429e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.774e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+746C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59379G>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.225G>A
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+746C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.77C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-134C>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 734
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19577
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 626
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 578
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6788
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2010
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2284
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 136
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5901
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175364362952515e-4
allele num: 8508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63040
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.775e1

FS
type: SiteQuality
SIO_000300: 8.070000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.505157e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.153e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 1.01e1

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59317G>T
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-126C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.77C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+475C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58612G>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-134C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.194G>T
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 203
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2010
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 626
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 136
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6788
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 734
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 578
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2284
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27300
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19577
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5901
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.586294416243655e-5
allele num: 63040
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 8.070000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.153e0

QD
type: SiteQuality
SIO_000300: 1.01e1

DP
type: SiteQuality
SIO_000300: 1.505157e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQ
type: SiteQuality
SIO_000300: 5.775e1

MQRankSum
type: SiteQuality
SIO_000300: 2.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-141C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58605G>A
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+739C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+468C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59310G>A
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+739C>T
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-255C>T
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 6666
bin: 3.25e1
variant carriers: 3

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2608
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 136
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 27129
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 51
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 663
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 3.75e1
variant carriers: 5

GenotypeDepth
all individuals: 2153
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19482
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 197
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44453
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 106
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3988
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.277547109549665e-4
allele num: 62620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.244424620874219e-4
allele num: 11210
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.726e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 1.277e0

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

QD
type: SiteQuality
SIO_000300: 1.363e1

VQSLOD
type: SiteQuality
SIO_000300: -9.92e-2

DP
type: SiteQuality
SIO_000300: 1.495862e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
consequence: splice_region_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.201G>C
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000357314
ensembl transcript: ENST00000368330
gene symbol: YY1AP1
hgvsc: ENST00000368330.2:c.-21+739C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-133C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476093
gene symbol: YY1AP1
hgvsc: ENST00000476093.1:n.46+739C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-141C>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-89G>C
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000316079
ensembl transcript: ENST00000347088
gene symbol: YY1AP1
hgvsc: ENST00000347088.5:c.-21+468C>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 27129
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2153
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2608
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6666
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19482
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 136
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 663
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3988
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44453
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596933886937081e-5
allele num: 62620
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

DP
type: SiteQuality
SIO_000300: 1.495862e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.363e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 1.277e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.726e1

VQSLOD
type: SiteQuality
SIO_000300: -9.92e-2

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000163374
ensembl transcript: ENST00000476027
gene symbol: YY1AP1
hgvsc: ENST00000476027.1:n.70C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58605G>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-141C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-141C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000440200
ensembl transcript: ENST00000452804
gene symbol: MSTO1
hgvsc: ENST00000452804.2:c.561-59372G>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000352134
ensembl transcript: ENST00000359205
gene symbol: YY1AP1
hgvsc: ENST00000359205.5:c.-133C>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476899
ensembl transcript: ENST00000471214
gene symbol: DAP3
hgvsc: ENST00000471214.1:c.-182G>T
variant of: http://identifiers.org/hgnc/2673

GenotypeDepth
all individuals: 2153
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 27129
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6666
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 663
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2608
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 136
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19482
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3988
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44453
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596933886937081e-5
allele num: 62620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.92e-2

QD
type: SiteQuality
SIO_000300: 1.363e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

MQ
type: SiteQuality
SIO_000300: 5.726e1

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

DP
type: SiteQuality
SIO_000300: 1.495862e6

FS
type: SiteQuality
SIO_000300: 1.277e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000461479
gene symbol: DAP3
hgvsc: ENST00000461479.1:n.233+7C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000132676
ensembl transcript: ENST00000479076
gene symbol: DAP3
hgvsc: ENST00000479076.1:n.202+7C>T
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000125459
ensembl protein: ENSP00000444133
ensembl transcript: ENST00000538143
gene symbol: MSTO1
hgvsc: ENST00000538143.1:c.291-58597C>T
variant of: http://identifiers.org/hgnc/29678

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000385791
ensembl transcript: ENST00000407221
gene symbol: YY1AP1
hgvsc: ENST00000407221.1:c.-216G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000346722
ensembl transcript: ENST00000354691
gene symbol: YY1AP1
hgvsc: ENST00000354691.5:c.-149G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59302C>T
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000387590
ensembl transcript: ENST00000438245
gene symbol: YY1AP1
hgvsc: ENST00000438245.2:c.-149G>A
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-263G>A
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26699
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 18640
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3232
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2836
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 744
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 725
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 586
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6459
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5093
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43299
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5444
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1176
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8708
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.154603643525357e-5
allele num: 16248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.601537475976938e-4
allele num: 6244
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.039956608208281e-5
allele num: 11062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.236664940445365e-5
allele num: 61792
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.41e-1

DP
type: SiteQuality
SIO_000300: 1.472781e6

QD
type: SiteQuality
SIO_000300: 8.199999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: -2.849e0

FS
type: SiteQuality
SIO_000300: 5.729e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.309e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

VQSLOD
type: SiteQuality
SIO_000300: -1.571e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000390116
ensembl transcript: ENST00000436865
gene symbol: YY1AP1
hgvsc: ENST00000436865.1:c.-21+718A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: true
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000203761
ensembl transcript: ENST00000538914
gene symbol: MSTO2P
hgvsc: ENST00000538914.1:n.267-59289T>C
variant of: http://identifiers.org/hgnc/26329

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000413240
ensembl transcript: ENST00000454523
gene symbol: YY1AP1
hgvsc: ENST00000454523.1:c.-151-11A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000132676
ensembl protein: ENSP00000476592
ensembl transcript: ENST00000471642
gene symbol: DAP3
hgvsc: ENST00000471642.2:c.-88+20T>C
variant of: http://identifiers.org/hgnc/2673

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000355298
ensembl transcript: ENST00000361831
gene symbol: YY1AP1
hgvsc: ENST00000361831.5:c.-265-11A>G
variant of: http://identifiers.org/hgnc/30935

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000163374
ensembl protein: ENSP00000354716
ensembl transcript: ENST00000361140
gene symbol: YY1AP1
hgvsc: ENST00000361140.4:c.-151-11A>G
variant of: http://identifiers.org/hgnc/30935

GenotypeDepth
all individuals: 52
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16916
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24562
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5932
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 957
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4838
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1130
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5040
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 540
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39936
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8451
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 452
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0