5-135178077-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178077
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178077
    reference: chr 5
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.47-28T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-116-28T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.47-28T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.47-28T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.6-28T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.47-28T>G
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47080
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

5-135178081-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178081
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178081
    reference: chr 5
allele count: 20691
allele frequency: 1.714136594094841e-1
allele num: 120708
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-116-24T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.47-24T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.47-24T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.47-24T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.47-24T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.6-24T>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 8.75e1
  variant carriers: 144
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 2.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.25e1
  variant carriers: 250
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.75e1
  variant carriers: 209
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 6.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 8.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.25e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 48221
  bin: 9.75e1
  variant carriers: 16227
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.75e1
  variant carriers: 288
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 9.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 2077
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

5-135178082-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178082
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178082
    reference: chr 5
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.47-23A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.47-23A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-116-23A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.47-23A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.6-23A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.47-23A>G
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47774
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56003
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

5-135178086-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178086
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178086
    reference: chr 5
allele count: 4
allele frequency: 3.313123281317298e-5
allele num: 120732
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.47-19A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-116-19A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.47-19A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.47-19A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.6-19A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.47-19A>G
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47774
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-135178092-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178092
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178092
    reference: chr 5
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.47-13T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.47-13T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.47-13T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.6-13T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.47-13T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-116-13T>G
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47772
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56023
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

5-135178096-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178096
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178096
    reference: chr 5
allele count: 3
allele frequency: 2.484718978283556e-5
allele num: 120738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.47-9G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.47-9G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.47-9G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-116-9G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.6-9G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.47-9G>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47773
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-135178099-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178099
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178099
    reference: chr 5
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.47-6C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-116-6C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.47-6C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.6-6C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.47-6C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.47-6C>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47773
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56024
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: c.47-6C>A
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

5-135178102-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178102
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178102
    reference: chr 5
allele count: 4
allele frequency: 3.312574532926991e-5
allele num: 120752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.6-3C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.47-3C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.47-3C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.47-3C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-116-3C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.47-3C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47773
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
hgvs: c.47-3C>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

5-135178109-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178109
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178109
    reference: chr 5
allele count: 1182
allele frequency: 9.788009274594237e-3
allele num: 120760
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-112A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.51A>G
  hgvsp: ENST00000425402.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.51A>G
  hgvsp: ENST00000412661.2:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.10A>G
  hgvsp: ENSP00000421427.1:p.Ser4Gly
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.51A>G
  hgvsp: ENST00000274513.5:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.51A>G
  hgvsp: ENST00000420621.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 47832
  bin: 9.75e1
  variant carriers: 1004
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 3.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser4Gly
num of homozygotes: 4
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS

5-135178114-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178114
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178114
    reference: chr 5
allele count: 1
allele frequency: 8.280750567231414e-6
allele num: 120762
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.56G>A
  hgvsp: ENSP00000413049.2:p.Ser19Asn
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.56G>A
  hgvsp: ENSP00000407973.1:p.Ser19Asn
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-107G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.56G>A
  hgvsp: ENSP00000274513.5:p.Ser19Asn
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.15G>A
  hgvsp: ENST00000462340.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.56G>A
  hgvsp: ENSP00000408750.1:p.Ser19Asn
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47809
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56128
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser19Asn
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

5-135178121-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178121
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178121
    reference: chr 5
allele count: 3
allele frequency: 2.484225170169424e-5
allele num: 120762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.63C>T
  hgvsp: ENST00000420621.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-100C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.22C>T
  hgvsp: ENSP00000421427.1:p.Arg8Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.63C>T
  hgvsp: ENST00000412661.2:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.63C>T
  hgvsp: ENST00000425402.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.63C>T
  hgvsp: ENST00000274513.5:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47809
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56132
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg8Cys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

5-135178124-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178124
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178124
    reference: chr 5
allele count: 93080
allele frequency: 7.70670155160708e-1
allele num: 120778
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-97T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.66T>C
  hgvsp: ENST00000412661.2:c.66T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.66T>C
  hgvsp: ENST00000274513.5:c.66T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.66T>C
  hgvsp: ENST00000425402.1:c.66T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.25T>C
  hgvsp: ENSP00000421427.1:p.Trp9Arg
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.66T>C
  hgvsp: ENST00000420621.1:c.66T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 6.75e1
  variant carriers: 681
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.75e1
  variant carriers: 558
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.25e1
  variant carriers: 686
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 8.75e1
  variant carriers: 785
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 3.75e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 8.25e1
  variant carriers: 787
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 9.25e1
  variant carriers: 861
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 5.25e1
  variant carriers: 472
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 7.75e1
  variant carriers: 712
genotype depth: GenotypeDepth
  all individuals: 49739
  bin: 9.75e1
  variant carriers: 49518
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 6.25e1
  variant carriers: 617
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 6.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.25e1
  variant carriers: 12
hgvs: p.Trp9Arg
num of homozygotes: 36396
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

5-135178125-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178125
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178125
    reference: chr 5
allele count: 2
allele frequency: 1.655985559805918e-5
allele num: 120774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-96G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.67G>A
  hgvsp: ENSP00000407973.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.26G>A
  hgvsp: ENSP00000421427.1:p.Trp9Ter
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.67G>A
  hgvsp: ENSP00000274513.5:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.67G>A
  hgvsp: ENSP00000413049.2:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.67G>A
  hgvsp: ENSP00000408750.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16994
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Trp9Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-135178141-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178141
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178141
    reference: chr 5
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.83C>T
  hgvsp: ENSP00000408750.1:p.Thr28Ile
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.42C>T
  hgvsp: ENST00000462340.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.83C>T
  hgvsp: ENSP00000413049.2:p.Thr28Ile
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.83C>T
  hgvsp: ENSP00000407973.1:p.Thr28Ile
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-80C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.83C>T
  hgvsp: ENSP00000274513.5:p.Thr28Ile
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2813
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49460
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr28Ile
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

5-135178142-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178142
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178142
    reference: chr 5
allele count: 20695
allele frequency: 1.713672948892054e-1
allele num: 120764
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.84A>G
  hgvsp: ENST00000412661.2:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.84A>G
  hgvsp: ENST00000274513.5:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-79A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.84A>G
  hgvsp: ENST00000425402.1:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.43A>G
  hgvsp: ENSP00000421427.1:p.Ser15Gly
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.84A>G
  hgvsp: ENST00000420621.1:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 9.25e1
  variant carriers: 457
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 6.75e1
  variant carriers: 327
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 8.75e1
  variant carriers: 346
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 2.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 5.75e1
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 3.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 7.75e1
  variant carriers: 309
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 298
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 3.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.25e1
  variant carriers: 248
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 8.25e1
  variant carriers: 365
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 4.75e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 17035
  bin: 9.75e1
  variant carriers: 15143
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 4.25e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 6.25e1
  variant carriers: 262
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2790
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1666
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser15Gly
num of homozygotes: 2077
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

5-135178144-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178144
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178144
    reference: chr 5
allele count: 2
allele frequency: 1.656232402530723e-5
allele num: 120756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.45T>C
  hgvsp: ENST00000462340.1:c.45T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.86T>C
  hgvsp: ENSP00000413049.2:p.Val29Ala
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.86T>C
  hgvsp: ENSP00000407973.1:p.Val29Ala
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.86T>C
  hgvsp: ENSP00000408750.1:p.Val29Ala
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-77T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.86T>C
  hgvsp: ENSP00000274513.5:p.Val29Ala
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4850
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val29Ala
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

5-135178146-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178146
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178146
    reference: chr 5
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.47A>G
  hgvsp: ENSP00000421427.1:p.Gln16Arg
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.88A>G
  hgvsp: ENSP00000407973.1:p.Lys30Glu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.88A>G
  hgvsp: ENSP00000408750.1:p.Lys30Glu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.88A>G
  hgvsp: ENSP00000274513.5:p.Lys30Glu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-75A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.88A>G
  hgvsp: ENSP00000413049.2:p.Lys30Glu
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43205
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys30Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

5-135178155-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178155
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178155
    reference: chr 5
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-73+7T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.90+7T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.90+7T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.49+7T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.90+7T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.90+7T>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4859
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43137
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: c.90+7T>C
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

5-135178159-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178159
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178159
    reference: chr 5
allele count: 2
allele frequency: 1.656506758547575e-5
allele num: 120736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.90+11C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-73+11C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.49+11C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.90+11C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.90+11C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.90+11C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4846
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43133
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

5-135178186-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178186
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178186
    reference: chr 5
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.49+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.90+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.90+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.90+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-73+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.90+38G>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

5-135178190-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178190
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178190
    reference: chr 5
allele count: 10
allele frequency: 8.288849839196313e-5
allele num: 120644
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.90+42T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-73+42T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.90+42T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.90+42T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.90+42T>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.49+42T>G
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4911
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43064
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3661
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

5-135178197-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178197
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178197
    reference: chr 5
allele count: 1
allele frequency: 8.30827005200977e-6
allele num: 120362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.90+49G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.90+49G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-73+49G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.49+49G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.90+49G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.90+49G>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43058
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/5-135178198-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178198
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178198
    reference: chr 5
allele count: 1262
allele frequency: 1.102144903234822e-2
allele num: 114504
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.90+50A>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.49+50A>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.90+50A>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-73+50A>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.90+50A>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.90+50A>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 6.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 4.75e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 6245
  bin: 5.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 3.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 4.25e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 6.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 2.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 5.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 2.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 8.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 7.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 7.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 3.75e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 9.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 4.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 8.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 3.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 6.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 4.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 5.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 5.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 7.75e1
  variant carriers: 35
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

5-135178199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135178199
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135178199
    reference: chr 5
allele count: 3
allele frequency: 2.487685954525101e-5
allele num: 120594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.49+51C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.90+51C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.90+51C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.90+51C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.90+51C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-73+51C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2273
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ

5-135186064-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186064
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186064
    reference: chr 5
allele count: 1
allele frequency: 8.300959590928711e-6
allele num: 120468
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-50G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-50G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-50G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-50G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-50G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-50G>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5615
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

5-135186069-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186069
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186069
    reference: chr 5
allele count: 2
allele frequency: 1.659640853719255e-5
allele num: 120508
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-45A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-45A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-45A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-45A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-45A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-45A>G
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

5-135186069-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186069
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186069
    reference: chr 5
allele count: 1
allele frequency: 8.298204268596276e-6
allele num: 120508
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-45A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-45A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-45A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-45A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-45A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-45A>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum

5-135186069-ATGAATAACCTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186069
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186058
    reference: chr 5
allele count: 9
allele frequency: 7.468383841736649e-5
allele num: 120508
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: ATGAATAACCTC
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

5-135186075-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186075
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186075
    reference: chr 5
allele count: 75298
allele frequency: 6.249004116319213e-1
allele num: 120496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-39A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-39A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-39A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-39A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-39A>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-39A>G
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 6.25e1
  variant carriers: 4563
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 2.75e1
  variant carriers: 1794
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 7.75e1
  variant carriers: 3352
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 2.25e1
  variant carriers: 1250
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 3.25e1
  variant carriers: 2020
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 6.75e1
  variant carriers: 4350
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 8.25e1
  variant carriers: 2793
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 9.25e1
  variant carriers: 1811
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.25e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 4.25e1
  variant carriers: 2884
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 8.75e1
  variant carriers: 2184
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 3.75e1
  variant carriers: 2358
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 4.75e1
  variant carriers: 3500
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.75e1
  variant carriers: 709
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 5.75e1
  variant carriers: 4406
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 7.25e1
  variant carriers: 4004
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 9.75e1
  variant carriers: 5147
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 5.25e1
  variant carriers: 4066
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 6.75e1
  variant carriers: 289
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 121
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.75e1
  variant carriers: 119
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 9.25e1
  variant carriers: 435
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 4855
  bin: 6.25e1
  variant carriers: 268
num of homozygotes: 23909
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

5-135186080-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186080
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186080
    reference: chr 5
allele count: 1
allele frequency: 8.290361625574107e-6
allele num: 120622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-34C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-34C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-34C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-34C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-34C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-34C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

5-135186084-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186084
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186084
    reference: chr 5
allele count: 2
allele frequency: 1.657687525901368e-5
allele num: 120650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-30G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-30G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-30G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-30G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-30G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-30G>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32266
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10023
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-135186096-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186096
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186096
    reference: chr 5
allele count: 2
allele frequency: 1.657165583985152e-5
allele num: 120688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-18C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-18C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-18C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-18C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-18C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-18C>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3965
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

5-135186104-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186104
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186104
    reference: chr 5
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-10C>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-10C>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-10C>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-10C>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-10C>G
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-10C>G
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7877
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3969
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32858
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3491
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

5-135186111-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186111
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186111
    reference: chr 5
allele count: 15
allele frequency: 1.242606491376311e-4
allele num: 120714
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.91-3T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-72-3T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.91-3T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.91-3T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.91-3T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.50-3T>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3486
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4909
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32936
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: c.91-3T>C
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

5-135186116-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186116
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186116
    reference: chr 5
allele count: 1
allele frequency: 8.283357078956959e-6
allele num: 120724
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.93T>C
  hgvsp: ENST00000412661.2:c.93T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.93T>C
  hgvsp: ENST00000420621.1:c.93T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.93T>C
  hgvsp: ENST00000425402.1:c.93T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.52T>C
  hgvsp: ENSP00000421427.1:p.Ser18Pro
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.93T>C
  hgvsp: ENST00000274513.5:c.93T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-70T>C
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser18Pro
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

5-135186117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186117
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186117
    reference: chr 5
allele count: 1
allele frequency: 8.283357078956959e-6
allele num: 120724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.53C>T
  hgvsp: ENSP00000421427.1:p.Ser18Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.94C>T
  hgvsp: ENSP00000413049.2:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.94C>T
  hgvsp: ENSP00000274513.5:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.94C>T
  hgvsp: ENSP00000407973.1:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-69C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.94C>T
  hgvsp: ENSP00000408750.1:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32970
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg32Cys
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

5-135186130-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186130
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186130
    reference: chr 5
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.107G>C
  hgvsp: ENSP00000413049.2:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.107G>C
  hgvsp: ENSP00000274513.5:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.107G>C
  hgvsp: ENSP00000407973.1:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.107G>C
  hgvsp: ENSP00000408750.1:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.66G>C
  hgvsp: ENSP00000421427.1:p.Trp22Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-56G>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33024
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10042
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3971
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly36Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

5-135186131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186131
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186131
    reference: chr 5
allele count: 30
allele frequency: 2.485007123687088e-4
allele num: 120724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.108C>T
  hgvsp: ENST00000420621.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-55C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.108C>T
  hgvsp: ENST00000425402.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.67C>T
  hgvsp: ENSP00000421427.1:p.Arg23Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.108C>T
  hgvsp: ENST00000274513.5:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.108C>T
  hgvsp: ENST00000412661.2:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15544
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3969
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3476
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg23Cys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

5-135186140-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186140
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186140
    reference: chr 5
allele count: 317
allele frequency: 2.625911199469848e-3
allele num: 120720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.76C>T
  hgvsp: ENSP00000421427.1:p.Arg26Trp
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.117C>T
  hgvsp: ENST00000274513.5:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.117C>T
  hgvsp: ENST00000425402.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.117C>T
  hgvsp: ENST00000412661.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.117C>T
  hgvsp: ENST00000420621.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-46C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 26801
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 15529
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10037
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4926
  bin: 9.75e1
  variant carriers: 316
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg26Trp
num of homozygotes: 1
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ

5-135186141-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186141
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186141
    reference: chr 5
allele count: 295
allele frequency: 2.443671305500331e-3
allele num: 120720
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.118G>A
  hgvsp: ENSP00000413049.2:p.Gly40Arg
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.118G>A
  hgvsp: ENSP00000408750.1:p.Gly40Arg
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.118G>A
  hgvsp: ENSP00000407973.1:p.Gly40Arg
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-45G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.77G>A
  hgvsp: ENSP00000421427.1:p.Arg26Gln
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.118G>A
  hgvsp: ENSP00000274513.5:p.Gly40Arg
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7909
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 15587
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26937
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 33225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3966
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4684
  bin: 9.75e1
  variant carriers: 293
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly40Arg
num of homozygotes: 1
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

5-135186150-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186150
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186150
    reference: chr 5
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.127C>T
  hgvsp: ENSP00000408750.1:p.Leu43Phe
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.127C>T
  hgvsp: ENSP00000407973.1:p.Leu43Phe
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.86C>T
  hgvsp: ENSP00000421427.1:p.Pro29Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-36C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.127C>T
  hgvsp: ENSP00000274513.5:p.Leu43Phe
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.127C>T
  hgvsp: ENSP00000413049.2:p.Leu43Phe
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu43Phe
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-135186162-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186162
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186162
    reference: chr 5
allele count: 11
allele frequency: 9.115317047300209e-5
allele num: 120676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-24C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.139C>A
  hgvsp: ENSP00000408750.1:p.Arg47Ser
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.139C>A
  hgvsp: ENSP00000274513.5:p.Arg47Ser
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.98C>A
  hgvsp: ENSP00000421427.1:p.Pro33Gln
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.139C>A
  hgvsp: ENSP00000413049.2:p.Arg47Ser
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.139C>A
  hgvsp: ENSP00000407973.1:p.Arg47Ser
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2431
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4393
  bin: 9.75e1
  variant carriers: 11
hgvs: p.Arg47Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-135186162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186162
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186162
    reference: chr 5
allele count: 6
allele frequency: 4.971991116709205e-5
allele num: 120676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.139C>T
  hgvsp: ENSP00000407973.1:p.Arg47Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.139C>T
  hgvsp: ENSP00000274513.5:p.Arg47Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.139C>T
  hgvsp: ENSP00000408750.1:p.Arg47Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.98C>T
  hgvsp: ENSP00000421427.1:p.Pro33Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.139C>T
  hgvsp: ENSP00000413049.2:p.Arg47Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-24C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27055
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2431
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3963
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33369
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg47Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

5-135186163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186163
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186163
    reference: chr 5
allele count: 3
allele frequency: 2.485995558354602e-5
allele num: 120676
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.140G>A
  hgvsp: ENSP00000413049.2:p.Arg47His
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.140G>A
  hgvsp: ENSP00000274513.5:p.Arg47His
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.140G>A
  hgvsp: ENSP00000408750.1:p.Arg47His
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.140G>A
  hgvsp: ENSP00000407973.1:p.Arg47His
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.99G>A
  hgvsp: ENST00000462340.1:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-23G>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4376
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3967
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg47His
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-135186163-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186163
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186163
    reference: chr 5
allele count: 2
allele frequency: 1.657330372236402e-5
allele num: 120676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.99G>T
  hgvsp: ENST00000462340.1:c.99G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.140G>T
  hgvsp: ENSP00000408750.1:p.Arg47Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.140G>T
  hgvsp: ENSP00000407973.1:p.Arg47Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.140G>T
  hgvsp: ENSP00000413049.2:p.Arg47Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.140G>T
  hgvsp: ENSP00000274513.5:p.Arg47Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-23G>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4376
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 33389
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg47Leu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

5-135186164-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186164
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186164
    reference: chr 5
allele count: 2
allele frequency: 1.657440249279014e-5
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.100C>T
  hgvsp: ENSP00000421427.1:p.Arg34Cys
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-22C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.141C>T
  hgvsp: ENST00000420621.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.141C>T
  hgvsp: ENST00000425402.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.141C>T
  hgvsp: ENST00000412661.2:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.141C>T
  hgvsp: ENST00000274513.5:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33397
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg34Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

5-135186165-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186165
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186165
    reference: chr 5
allele count: 5
allele frequency: 4.144081422911798e-5
allele num: 120654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-21G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.101G>A
  hgvsp: ENSP00000421427.1:p.Arg34His
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.142G>A
  hgvsp: ENSP00000274513.5:p.Val48Met
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.142G>A
  hgvsp: ENSP00000408750.1:p.Val48Met
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.142G>A
  hgvsp: ENSP00000407973.1:p.Val48Met
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.142G>A
  hgvsp: ENSP00000413049.2:p.Val48Met
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15609
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val48Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-135186168-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186168
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186168
    reference: chr 5
allele count: 2
allele frequency: 1.657715005636231e-5
allele num: 120648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.145G>T
  hgvsp: ENSP00000407973.1:p.Val49Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.145G>T
  hgvsp: ENSP00000274513.5:p.Val49Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+1G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-18G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.145G>T
  hgvsp: ENSP00000413049.2:p.Val49Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.104G>T
  hgvsp: ENSP00000421427.1:p.Gly35Val
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15596
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33381
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3950
  bin: 7.75e1
  variant carriers: 0
hgvs: c.144+1G>T
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

5-135186170-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186170
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186170
    reference: chr 5
allele count: 3
allele frequency: 2.486902314477087e-5
allele num: 120632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.106G>A
  hgvsp: ENSP00000421427.1:p.Val36Ile
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.147G>A
  hgvsp: ENST00000274513.5:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.147G>A
  hgvsp: ENST00000412661.2:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-16G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.147G>A
  hgvsp: ENST00000420621.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+3G>A
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3472
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4362
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val36Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

5-135186171-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186171
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186171
    reference: chr 5
allele count: 1
allele frequency: 8.289399515899069e-6
allele num: 120636
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.148T>A
  hgvsp: ENSP00000413049.2:p.Tyr50Asn
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.148T>A
  hgvsp: ENSP00000274513.5:p.Tyr50Asn
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-15T>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.107T>A
  hgvsp: ENSP00000421427.1:p.Val36Glu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.148T>A
  hgvsp: ENSP00000407973.1:p.Tyr50Asn
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+4T>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33356
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3947
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr50Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum

5-135186171-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186171
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186171
    reference: chr 5
allele count: 1
allele frequency: 8.289399515899069e-6
allele num: 120636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-15T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+4T>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.148T>C
  hgvsp: ENSP00000407973.1:p.Tyr50His
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.148T>C
  hgvsp: ENSP00000413049.2:p.Tyr50His
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.107T>C
  hgvsp: ENSP00000421427.1:p.Val36Ala
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.148T>C
  hgvsp: ENSP00000274513.5:p.Tyr50His
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4360
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3947
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10095
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr50His
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-135186174-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186174
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186174
    reference: chr 5
allele count: 1
allele frequency: 8.291048983517394e-6
allele num: 120612
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+7A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.110A>T
  hgvsp: ENSP00000421427.1:p.Gln37Leu
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.151A>T
  hgvsp: ENSP00000407973.1:p.Arg51Trp
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.151A>T
  hgvsp: ENSP00000413049.2:p.Arg51Trp
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.151A>T
  hgvsp: ENSP00000274513.5:p.Arg51Trp
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-12A>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4355
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg51Trp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

5-135186176-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186176
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186176
    reference: chr 5
allele count: 2
allele frequency: 1.658484808279156e-5
allele num: 120592
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+9G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.153G>T
  hgvsp: ENSP00000407973.1:p.Arg51Ser
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-10G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.153G>T
  hgvsp: ENSP00000274513.5:p.Arg51Ser
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.112G>T
  hgvsp: ENSP00000421427.1:p.Glu38Ter
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.153G>T
  hgvsp: ENSP00000413049.2:p.Arg51Ser
  variant of: http://identifiers.org/hgnc/30451
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4353
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3934
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu38Ter
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-135186193-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186193
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186193
    reference: chr 5
allele count: 4
allele frequency: 3.328063898826857e-5
allele num: 120190
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+8C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+8C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+8C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+8C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+26C>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+8C>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15005
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3841
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32012
  bin: 6.25e1
  variant carriers: 0
hgvs: c.162+8C>A
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

5-135186194-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186194
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186194
    reference: chr 5
allele count: 1
allele frequency: 8.324592511196577e-6
allele num: 120126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+9C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+27C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+9C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+9C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+9C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+9C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4322
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9630
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2371
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

5-135186202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186202
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186202
    reference: chr 5
allele count: 15
allele frequency: 1.252295875772249e-4
allele num: 119780
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+17C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+35C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+17C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+17C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+17C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+17C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8080
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25053
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13699
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9139
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1620
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29657
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-135186203-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186203
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186203
    reference: chr 5
allele count: 1
allele frequency: 8.354498061756449e-6
allele num: 119696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+18G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+36G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+18G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+18G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+18G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+18G>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3669
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9070
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4271
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29574
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

5-135186205-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186205
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186204
    reference: chr 5
allele count: 1
allele frequency: 8.357570287166115e-6
allele num: 119652
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+39delT
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+21delT
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+21delT
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+21delT
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+21delT
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+21delT
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3186
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8860
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: GT
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

5-135186213-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186213
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186213
    reference: chr 5
allele count: 3
allele frequency: 2.512983749371754e-5
allele num: 119380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+28A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+46A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+28A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+28A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+28A>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+28A>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21602
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4259
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2461
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

5-135186216-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186216
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186216
    reference: chr 5
allele count: 2
allele frequency: 1.6787255115916e-5
allele num: 119138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+49C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+31C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+31C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+31C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+31C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+31C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19633
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1940
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3386
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3289
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-135186223-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186223
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186223
    reference: chr 5
allele count: 1
allele frequency: 8.420910805712745e-6
allele num: 118752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+38G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+56G>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9177
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3228
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4244
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19938
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

5-135186229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186229
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186229
    reference: chr 5
allele count: 3
allele frequency: 2.540091104600952e-5
allele num: 118106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+44C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+44C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+44C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+44C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+44C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+62C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11752
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12044
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4985
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2066
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3573
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3038
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4245
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

5-135186232-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186232
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186232
    reference: chr 5
allele count: 3
allele frequency: 2.548636479483476e-5
allele num: 117710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+47C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+47C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+47C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+65C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+47C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+47C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13329
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12741
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3014
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3004
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4949
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1284
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5135
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

5-135186235-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135186235
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135186235
    reference: chr 5
allele count: 1
allele frequency: 8.520645524104906e-6
allele num: 117362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.-1+50G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.162+50G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.162+50G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+68G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.162+50G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.121+50G>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11774
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5206
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4236
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4460
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 266
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genotype quality: GenotypeQuality
  all individuals: 3001
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genotype quality: GenotypeQuality
  all individuals: 5160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-135188205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188205
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188205
    reference: chr 5
allele count: 7
allele frequency: 6.327626416936344e-5
allele num: 110626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2038C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-47C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-47C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-47C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-47C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-47C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4630
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 49485
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  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

5-135188206-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188206
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188206
    reference: chr 5
allele count: 1
allele frequency: 9.033913310567871e-6
allele num: 110694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-46G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-46G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-46G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2039G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-46G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-46G>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8449
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49480
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

5-135188206-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188206
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188206
    reference: chr 5
allele count: 11
allele frequency: 9.937304641624659e-5
allele num: 110694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-46G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-46G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-46G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-46G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-46G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2039G>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8449
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD

5-135188210-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188210
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188210
    reference: chr 5
allele count: 3
allele frequency: 2.707825616030328e-5
allele num: 110790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-42G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-42G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2043G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-42G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-42G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-42G>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

5-135188213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188213
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188213
    reference: chr 5
allele count: 4
allele frequency: 3.607568679088728e-5
allele num: 110878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-39C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-39C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2046C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-39C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-39C>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-39C>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8451
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

5-135188214-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188214
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188214
    reference: chr 5
allele count: 85799
allele frequency: 7.645606843699875e-1
allele num: 112220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-38G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-38G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2047G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-38G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-38G>C
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-38G>C
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.25e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 5.75e1
  variant carriers: 1942
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.75e1
  variant carriers: 928
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 8.75e1
  variant carriers: 3930
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.25e1
  variant carriers: 656
genotype depth: GenotypeDepth
  all individuals: 20324
  bin: 9.75e1
  variant carriers: 20278
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 2.75e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 1.25e1
  variant carriers: 993
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 2.5e0
  variant carriers: 660
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 7.5e0
  variant carriers: 2579
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.75e1
  variant carriers: 415
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 3.25e1
  variant carriers: 257
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 7.75e1
  variant carriers: 4064
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 9.25e1
  variant carriers: 3501
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 6.25e1
  variant carriers: 2591
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 5.25e1
  variant carriers: 1406
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 6.75e1
  variant carriers: 3288
genotype depth: GenotypeDepth
  all individuals: 4148
  bin: 8.25e1
  variant carriers: 4127
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 3808
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.25e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 199
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.25e1
  variant carriers: 386
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 1.75e1
  variant carriers: 845
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.75e1
  variant carriers: 125
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 6.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 2.25e1
  variant carriers: 818
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.25e1
  variant carriers: 149
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 29
num of homozygotes: 33198
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

5-135188214-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188214
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188214
    reference: chr 5
allele count: 1
allele frequency: 8.911067545891997e-6
allele num: 112220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-38G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-38G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-38G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-38G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2047G>T
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-38G>T
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20324
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

5-135188215-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188215
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188215
    reference: chr 5
allele count: 2
allele frequency: 1.778030653248462e-5
allele num: 112484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2048G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-37G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-37G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-37G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-37G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-37G>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8527
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

5-135188216-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135188216
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 135188216
    reference: chr 5
allele count: 1
allele frequency: 8.88651915044877e-6
allele num: 112530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000399834
  ensembl transcript: ENST00000433282
  gene symbol: SLC25A48
  hgvsc: ENST00000433282.2:c.1-36G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000407973
  ensembl transcript: ENST00000420621
  gene symbol: SLC25A48
  hgvsc: ENST00000420621.1:c.163-36G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000413049
  ensembl transcript: ENST00000412661
  gene symbol: SLC25A48
  hgvsc: ENST00000412661.2:c.163-36G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000408750
  ensembl transcript: ENST00000425402
  gene symbol: SLC25A48
  hgvsc: ENST00000425402.1:c.144+2049G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000274513
  ensembl transcript: ENST00000274513
  gene symbol: SLC25A48
  hgvsc: ENST00000274513.5:c.163-36G>A
  variant of: http://identifiers.org/hgnc/30451
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145832
  ensembl protein: ENSP00000421427
  ensembl transcript: ENST00000462340
  gene symbol: SLC25A48
  hgvsc: ENST00000462340.1:c.122-36G>A
  variant of: http://identifiers.org/hgnc/30451
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55176
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.610000000000001e-1

DP
type: SiteQuality
SIO_000300: 8.22979e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
all individuals: 237
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 602
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 56591
bin: 9.75e1
variant carriers: 18517

GenotypeQuality
all individuals: 1142
bin: 6.25e1
variant carriers: 10

Other
type: Population
allele count: 171
allele frequency: 1.904231625835189e-1
allele num: 898
num of homozygotes: 19

African
type: Population
allele count: 1781
allele frequency: 1.816234958188864e-1
allele num: 9806
num of homozygotes: 164

South Asian
type: Population
allele count: 2104
allele frequency: 1.275770070337133e-1
allele num: 16492
num of homozygotes: 153

European (Non-Finnish)
type: Population
allele count: 13947
allele frequency: 2.091004497751124e-1
allele num: 66700
num of homozygotes: 1525

European (Finnish)
type: Population
allele count: 1368
allele frequency: 2.068965517241379e-1
allele num: 6612
num of homozygotes: 138

Latino
type: Population
allele count: 1249
allele frequency: 1.078956461644782e-1
allele num: 11576
num of homozygotes: 76

East Asian
type: Population
allele count: 71
allele frequency: 8.232838589981447e-3
allele num: 8624
num of homozygotes: 2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.23e0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.521e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.55e-2

DP
type: SiteQuality
SIO_000300: 8.824851e6

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.984e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e-1

FS
type: SiteQuality
SIO_000300: 3.597e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 8.619795e6

QD
type: SiteQuality
SIO_000300: 1.572e1

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56009
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.149e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 1.766e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.039e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 8.620435e6

VQSLOD
type: SiteQuality
SIO_000300: 9.379999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.01e-1

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.251e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.630000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

DP
type: SiteQuality
SIO_000300: 8.621083e6

FS
type: SiteQuality
SIO_000300: 1.6059e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.135e0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56023
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496807266840543e-5
allele num: 66714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.409999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

DP
type: SiteQuality
SIO_000300: 8.621384e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.99e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 3.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.246e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.25e-1

GenotypeQuality
all individuals: 599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.942e0

MQRankSum
type: SiteQuality
SIO_000300: -8.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.93e-1

MQ
type: SiteQuality
SIO_000300: 5.88e1

FS
type: SiteQuality
SIO_000300: 1.0046e1

VQSLOD
type: SiteQuality
SIO_000300: -1.613e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

DP
type: SiteQuality
SIO_000300: 8.621517e6

GenotypeQuality
all individuals: 395
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56028
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
SIO_000300: 8.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.591e0

QD
type: SiteQuality
SIO_000300: 1.768e1

FS
type: SiteQuality
SIO_000300: 5.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

DP
type: SiteQuality
SIO_000300: 8.621905e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

GenotypeQuality
all individuals: 161
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56146
bin: 9.75e1
variant carriers: 1176

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1206
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 9.25e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 57
allele frequency: 8.618082854550952e-3
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 860
allele frequency: 1.288814290852416e-2
allele num: 66728
num of homozygotes: 3

African
type: Population
allele count: 21
allele frequency: 2.141982864137087e-3
allele num: 9804
num of homozygotes: 0

South Asian
type: Population
allele count: 191
allele frequency: 1.156734496124031e-2
allele num: 16512
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 44
allele frequency: 3.800967519004838e-3
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 9
allele frequency: 1.0e-2
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.345e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

DP
type: SiteQuality
SIO_000300: 8.652819e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

QD
type: SiteQuality
SIO_000300: 1.151e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 5.24e-1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.019e0

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 1.731e0

MQ
type: SiteQuality
SIO_000300: 5.804e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 1.426e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 8.6382e6

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.638362e6

QD
type: SiteQuality
SIO_000300: 2.479e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

FS
type: SiteQuality
SIO_000300: 5.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e-1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 128
bin: 7.75e1
variant carriers: 25

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 132
bin: 9.25e1
variant carriers: 22

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 18

GenotypeQuality
all individuals: 119
bin: 6.75e1
variant carriers: 13

GenotypeQuality
all individuals: 59531
bin: 9.75e1
variant carriers: 56539

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 1

African
type: Population
allele count: 7343
allele frequency: 7.476074119323967e-1
allele num: 9822
num of homozygotes: 2757

Latino
type: Population
allele count: 6230
allele frequency: 5.382754449628477e-1
allele num: 11574
num of homozygotes: 1743

European (Finnish)
type: Population
allele count: 5237
allele frequency: 7.920447670901392e-1
allele num: 6612
num of homozygotes: 2073

Other
type: Population
allele count: 701
allele frequency: 7.788888888888889e-1
allele num: 900
num of homozygotes: 277

South Asian
type: Population
allele count: 12938
allele frequency: 7.835513565891473e-1
allele num: 16512
num of homozygotes: 5084

European (Non-Finnish)
type: Population
allele count: 54539
allele frequency: 8.171860952951753e-1
allele num: 66740
num of homozygotes: 22324

East Asian
type: Population
allele count: 6092
allele frequency: 7.068925504757484e-1
allele num: 8618
num of homozygotes: 2138

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e0

FS
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

QD
type: SiteQuality
SIO_000300: 2.554e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e-1

DP
type: SiteQuality
SIO_000300: 9.797486e6

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49463
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1392
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.43e1

FS
type: SiteQuality
SIO_000300: 8.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

VQSLOD
type: SiteQuality
SIO_000300: -5.526e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 5.073767e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e0

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.693e1

MQRankSum
type: SiteQuality
SIO_000300: -6.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.45e0

FS
type: SiteQuality
SIO_000300: 1.0525e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.554e0

QD
type: SiteQuality
SIO_000300: 1.033e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

DP
type: SiteQuality
SIO_000300: 5.07297e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-1

GenotypeQuality
all individuals: 114
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1525
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 930
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 49661
bin: 9.75e1
variant carriers: 18578

GenotypeQuality
all individuals: 938
bin: 8.75e1
variant carriers: 4

South Asian
type: Population
allele count: 2104
allele frequency: 1.274687992245244e-1
allele num: 16506
num of homozygotes: 154

European (Non-Finnish)
type: Population
allele count: 13952
allele frequency: 2.090688404711242e-1
allele num: 66734
num of homozygotes: 1525

African
type: Population
allele count: 1782
allele frequency: 1.816143497757848e-1
allele num: 9812
num of homozygotes: 164

East Asian
type: Population
allele count: 71
allele frequency: 8.230929747275679e-3
allele num: 8626
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 1368
allele frequency: 2.068965517241379e-1
allele num: 6612
num of homozygotes: 138

Other
type: Population
allele count: 171
allele frequency: 1.9e-1
allele num: 900
num of homozygotes: 19

Latino
type: Population
allele count: 1247
allele frequency: 1.077414895455331e-1
allele num: 11574
num of homozygotes: 75

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.61e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

FS
type: SiteQuality
SIO_000300: 5.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e-1

QD
type: SiteQuality
SIO_000300: 1.465e1

VQSLOD
type: SiteQuality
SIO_000300: 4.45e0

DP
type: SiteQuality
SIO_000300: 5.062528e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

GenotypeQuality
all individuals: 2130
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43207
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2683
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.699999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -8.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e0

FS
type: SiteQuality
SIO_000300: 1.386e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
SIO_000300: -2.014e0

DP
type: SiteQuality
SIO_000300: 3.4776e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4841
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2683
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9810
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e0

MQRankSum
type: SiteQuality
SIO_000300: -4.69e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

QD
type: SiteQuality
SIO_000300: 1.695e1

DP
type: SiteQuality
SIO_000300: 3.477362e6

FS
type: SiteQuality
SIO_000300: 5.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

VQSLOD
type: SiteQuality
SIO_000300: -1.734e0

GenotypeQuality
all individuals: 2348
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2251
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2706
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2127
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 3.474911e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 4.859e0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.042e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2696
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997781641585227e-5
allele num: 66716
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

DP
type: SiteQuality
SIO_000300: 3.474448e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 3.278e1

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.876e0

FS
type: SiteQuality
SIO_000300: 4.477e0

VQSLOD
type: SiteQuality
SIO_000300: -1.714e0

GenotypeQuality
all individuals: 4199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2466
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 1.0112e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.299e0

QD
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -2.633e0

DP
type: SiteQuality
SIO_000300: 3.457306e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.926e0

GenotypeQuality
all individuals: 231
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2042
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.50030001200048e-5
allele num: 66664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.053268765133172e-4
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.7e-1

FS
type: SiteQuality
SIO_000300: 1.0287e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.189e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.274e0

DP
type: SiteQuality
SIO_000300: 3.446114e6

MQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

GenotypeQuality
all individuals: 374
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1865
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1206
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66476
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023122570083896e-4
allele num: 9774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.58e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.42763e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e-1

QD
type: SiteQuality
SIO_000300: 1.41e1

GenotypeQuality
all individuals: 223
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2504
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 220
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 41914
bin: 9.75e1
variant carriers: 869

GenotypeQuality
all individuals: 1895
bin: 8.25e1
variant carriers: 33

GenotypeQuality
all individuals: 1443
bin: 6.75e1
variant carriers: 37

GenotypeQuality
all individuals: 2084
bin: 9.25e1
variant carriers: 39

GenotypeQuality
all individuals: 1021
bin: 7.25e1
variant carriers: 29

Other
type: Population
allele count: 20
allele frequency: 2.369668246445497e-2
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 198
allele frequency: 2.25769669327252e-2
allele num: 8770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 704
allele frequency: 1.118774433461526e-2
allele num: 62926
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 1.039246851693361e-3
allele num: 16358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 256
allele frequency: 4.427533725354549e-2
allele num: 5782
num of homozygotes: 0

Latino
type: Population
allele count: 37
allele frequency: 3.247893258426966e-3
allele num: 11392
num of homozygotes: 0

East Asian
type: Population
allele count: 30
allele frequency: 3.557874762808349e-3
allele num: 8432
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.568e0

DP
type: SiteQuality
SIO_000300: 3.394062e6

FS
type: SiteQuality
SIO_000300: 3.2623e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-2

QD
type: SiteQuality
SIO_000300: 2.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

VQSLOD
type: SiteQuality
SIO_000300: -5.91e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45853
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1093
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.058727569331158e-4
allele num: 9808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

FS
type: SiteQuality
SIO_000300: 3.852e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 1.651e1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

DP
type: SiteQuality
SIO_000300: 3.546384e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 232
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1648
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43128
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 554
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.66e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.175e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

FS
type: SiteQuality
SIO_000300: 1.434e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.391e1

DP
type: SiteQuality
SIO_000300: 3.117537e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43149
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003273568189326e-5
allele num: 66594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.243e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

FS
type: SiteQuality
SIO_000300: 4.471e0

DP
type: SiteQuality
SIO_000300: 3.120005e6

VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

QD
type: SiteQuality
SIO_000300: 4.25e0

MQ
type: SiteQuality
SIO_000300: 5.367e1

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 897
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6082
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.367e1

MQRankSum
type: SiteQuality
SIO_000300: -4.243e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

DP
type: SiteQuality
SIO_000300: 3.120005e6

QD
type: SiteQuality
SIO_000300: 4.25e0

FS
type: SiteQuality
SIO_000300: 4.471e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43149
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 6082
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.351473105685197e-4
allele num: 66594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

DP
type: SiteQuality
SIO_000300: 3.120005e6

MQRankSum
type: SiteQuality
SIO_000300: -4.243e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.367e1

QD
type: SiteQuality
SIO_000300: 4.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

FS
type: SiteQuality
SIO_000300: 4.471e0

GenotypeQuality
all individuals: 49356
bin: 9.75e1
variant carriers: 48639

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 14

GenotypeQuality
all individuals: 418
bin: 8.75e1
variant carriers: 247

GenotypeQuality
all individuals: 908
bin: 7.75e1
variant carriers: 355

GenotypeQuality
all individuals: 779
bin: 8.25e1
variant carriers: 431

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 57

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 173

GenotypeQuality
all individuals: 702
bin: 7.25e1
variant carriers: 170

Latino
type: Population
allele count: 5126
allele frequency: 4.43886387253204e-1
allele num: 11548
num of homozygotes: 1180

European (Non-Finnish)
type: Population
allele count: 41441
allele frequency: 6.223680653590845e-1
allele num: 66586
num of homozygotes: 12976

East Asian
type: Population
allele count: 6079
allele frequency: 7.063676504764118e-1
allele num: 8606
num of homozygotes: 2126

South Asian
type: Population
allele count: 11526
allele frequency: 7.001579394970234e-1
allele num: 16462
num of homozygotes: 4060

European (Finnish)
type: Population
allele count: 3914
allele frequency: 5.935699120412496e-1
allele num: 6594
num of homozygotes: 1150

African
type: Population
allele count: 6664
allele frequency: 6.798612528055499e-1
allele num: 9802
num of homozygotes: 2255

Other
type: Population
allele count: 548
allele frequency: 6.102449888641426e-1
allele num: 898
num of homozygotes: 162

FS
type: SiteQuality
SIO_000300: 6.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

VQSLOD
type: SiteQuality
SIO_000300: 4.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.88e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

DP
type: SiteQuality
SIO_000300: 3.553362e6

QD
type: SiteQuality
SIO_000300: 2.509e1

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3959
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31765
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5113
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.162e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.77e-1

QD
type: SiteQuality
SIO_000300: 3.462e1

VQSLOD
type: SiteQuality
SIO_000300: -2.307e0

DP
type: SiteQuality
SIO_000300: 1.869393e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 1.2319e1

MQ
type: SiteQuality
SIO_000300: 5.94e1

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4960
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2453
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3964
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214329083181542e-4
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.35e-1

DP
type: SiteQuality
SIO_000300: 1.866414e6

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

FS
type: SiteQuality
SIO_000300: 2.781e0

QD
type: SiteQuality
SIO_000300: 1.364e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.363e0

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4943
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2447
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319647413593134e-4
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.87e-1

QD
type: SiteQuality
SIO_000300: 1.185e1

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.806e0

VQSLOD
type: SiteQuality
SIO_000300: 7.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

FS
type: SiteQuality
SIO_000300: 6.02e-1

DP
type: SiteQuality
SIO_000300: 1.869321e6

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10041
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4937
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.706e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.665e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 2.952e0

DP
type: SiteQuality
SIO_000300: 1.870438e6

QD
type: SiteQuality
SIO_000300: 2.113e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

GenotypeQuality
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3973
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10041
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 12
allele frequency: 1.036806635562468e-3
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.498155756139982e-5
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.870836e6

QD
type: SiteQuality
SIO_000300: 1.344e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.198e0

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3972
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4894
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2446
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.019783805833163e-4
allele num: 9806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.870006e6

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 2.591e0

QD
type: SiteQuality
SIO_000300: 1.571e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.26e-1

GenotypeQuality
all individuals: 4892
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10041
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3973
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.12e-1

DP
type: SiteQuality
SIO_000300: 1.87009e6

FS
type: SiteQuality
SIO_000300: 7.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.1e0

QD
type: SiteQuality
SIO_000300: 1.301e1

GenotypeQuality
all individuals: 3476
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4891
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2445
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.995e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.008e0

DP
type: SiteQuality
SIO_000300: 1.870275e6

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.062e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.315e0

VQSLOD
type: SiteQuality
SIO_000300: 2.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10039
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4900
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32998
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.479709267110841e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.94890861117774e-4
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319647413593134e-4
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

FS
type: SiteQuality
SIO_000300: 1.754e0

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

DP
type: SiteQuality
SIO_000300: 1.870941e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

GenotypeQuality
all individuals: 1388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33025
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3470
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 5
allele frequency: 5.555555555555556e-3
allele num: 900
num of homozygotes: 1

South Asian
type: Population
allele count: 10
allele frequency: 6.05766900896535e-4
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 89
allele frequency: 1.346037507562008e-2
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 186
allele frequency: 2.788271271811477e-3
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.040399918384003e-4
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 23
allele frequency: 2.667594525632104e-3
allele num: 8622
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

QD
type: SiteQuality
SIO_000300: 1.132e1

DP
type: SiteQuality
SIO_000300: 1.876667e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

FS
type: SiteQuality
SIO_000300: 5.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2432
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10082
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 182
allele frequency: 2.728308448761768e-3
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.123789764868603e-3
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 60
allele frequency: 3.63460140537921e-3
allele num: 16508
num of homozygotes: 1

African
type: Population
allele count: 4
allele frequency: 4.080799836768007e-4
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 32
allele frequency: 4.839685420447671e-3
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.444444444444444e-3
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 5.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.98e0

QD
type: SiteQuality
SIO_000300: 1.231e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.6e-2

DP
type: SiteQuality
SIO_000300: 1.867891e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeQuality
all individuals: 4403
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33422
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3979
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10118
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.1e-2

DP
type: SiteQuality
SIO_000300: 1.852108e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.007e0

QD
type: SiteQuality
SIO_000300: 1.027e1

MQRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33369
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3963
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.665050896752302e-4
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

QD
type: SiteQuality
SIO_000300: 1.141e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 1.851197e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

GenotypeQuality
all individuals: 113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4393
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 97
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.458412588621823e-4
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 5.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e-1

DP
type: SiteQuality
SIO_000300: 1.851197e6

QD
type: SiteQuality
SIO_000300: 1.141e1

GenotypeQuality
all individuals: 10105
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33389
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 1.850026e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.023e0

QD
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SIO_000300: 1.116e1

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26
bin: 2.75e1
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GenotypeQuality
all individuals: 3480
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999040307101727e-5
allele num: 66688
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.850026e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.023e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.116e1

FS
type: SiteQuality
SIO_000300: 6.8e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999220202747286e-5
allele num: 66684
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

MQRankSum
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SIO_000300: 3.02e0

FS
type: SiteQuality
SIO_000300: 1.5262e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.88e-1

DP
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SIO_000300: 1.849552e6

QD
type: SiteQuality
SIO_000300: 1.33e1

VQSLOD
type: SiteQuality
SIO_000300: -2.081e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.998980173370527e-5
allele num: 66678
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.133e1

MQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 1.849379e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.108e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.108e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999760019198464e-5
allele num: 66672
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e0

DP
type: SiteQuality
SIO_000300: 1.848375e6

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.149e0

QD
type: SiteQuality
SIO_000300: 1.381e1

FS
type: SiteQuality
SIO_000300: 7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500315022051544e-5
allele num: 66662
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.739e0

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.15e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 1.847726e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

VQSLOD
type: SiteQuality
SIO_000300: 6.03e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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DP
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.24e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
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allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

East Asian
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allele num: 8620
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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FS
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MQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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DP
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

East Asian
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allele num: 8620
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66644
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South Asian
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allele frequency: 1.212709192335678e-4
allele num: 16492
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African
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Other
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Latino
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MQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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FS
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MQ
type: SiteQuality
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QD
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BaseQRankSum
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SIO_000300: -2.773e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01050666827227e-5
allele num: 66434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21580547112462e-4
allele num: 16450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.86e-1

QD
type: SiteQuality
SIO_000300: 1.012e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.376e0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.727e0

DP
type: SiteQuality
SIO_000300: 1.818515e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.12e-1

GenotypeQuality
all individuals: 305
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
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GenotypeQuality
all individuals: 140
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variant carriers: 0

GenotypeQuality
all individuals: 31837
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variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
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variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506114826194349e-5
allele num: 66396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.34e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.021e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.406e0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.814818e6

GenotypeQuality
all individuals: 761
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
all individuals: 3701
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variant carriers: 0

GenotypeQuality
all individuals: 3263
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.043939439726814e-5
allele num: 66182
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.031140441328109e-3
allele num: 9698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.83e0

QD
type: SiteQuality
SIO_000300: 1.391e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 6.75e-1

DP
type: SiteQuality
SIO_000300: 1.773206e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 964
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GenotypeQuality
all individuals: 1332
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.782e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.16e-1

DP
type: SiteQuality
SIO_000300: 1.76596e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

FS
type: SiteQuality
SIO_000300: 6.406e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: -1.162e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2265
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1327
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variant carriers: 0

GenotypeQuality
all individuals: 507
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variant carriers: 0

GenotypeQuality
all individuals: 4267
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.100536847242558e-5
allele num: 16392
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.746919e6

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

QD
type: SiteQuality
SIO_000300: 1.516e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.76e-1

MQ
type: SiteQuality
SIO_000300: 6.03e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.568e0

GenotypeQuality
all individuals: 1308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8315
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variant carriers: 0

GenotypeQuality
all individuals: 24907
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2898
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variant carriers: 0

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
all individuals: 606
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variant carriers: 0

GenotypeQuality
all individuals: 2196
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65910
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.831949193942355e-4
allele num: 16376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.922e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.39e-1

FS
type: SiteQuality
SIO_000300: 2.629e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.16e-1

QD
type: SiteQuality
SIO_000300: 1.092e1

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

DP
type: SiteQuality
SIO_000300: 1.683501e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4255
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 1428
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variant carriers: 0

GenotypeQuality
all individuals: 21605
bin: 6.25e1
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GenotypeQuality
all individuals: 2850
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520403819254394e-5
allele num: 65772
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.640214e6

QD
type: SiteQuality
SIO_000300: 1.467e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.71e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3569
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GenotypeQuality
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GenotypeQuality
all individuals: 2690
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65524
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.131221719457014e-3
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 1.595882e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

QD
type: SiteQuality
SIO_000300: 1.295e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.55e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1287
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.604192884987262e-5
allele num: 65158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.94e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.16e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.080714725816389e-5
allele num: 64920
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9510
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East Asian
type: Population
allele count: 1
allele frequency: 1.187366421277606e-4
allele num: 8422
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.539855e6

MQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.338e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1282
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GenotypeQuality
all individuals: 3063
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.05708245243129e-4
allele num: 9460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64718
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.46e-1

DP
type: SiteQuality
SIO_000300: 1.532718e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.187e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.243e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

GenotypeQuality
all individuals: 341
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.09051254089422e-4
allele num: 64190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e-1

FS
type: SiteQuality
SIO_000300: 3.377e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.33e0

DP
type: SiteQuality
SIO_000300: 3.868418e6

QD
type: SiteQuality
SIO_000300: 1.403e1

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.060895395713983e-4
allele num: 9426
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

DP
type: SiteQuality
SIO_000300: 3.869031e6

QD
type: SiteQuality
SIO_000300: 1.301e1

GenotypeQuality
all individuals: 476
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49480
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740038280842179e-4
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.401825488302545e-4
allele num: 64202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.869031e6

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.301e1

GenotypeQuality
all individuals: 118
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49490
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1853
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.669842159335015e-5
allele num: 64242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 3.870614e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 3.517e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.051e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.329e0

QD
type: SiteQuality
SIO_000300: 1.221e1

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49494
bin: 9.75e1
variant carriers: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.667952947034294e-5
allele num: 64268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9642
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.872405e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

FS
type: SiteQuality
SIO_000300: 1.376e0

QD
type: SiteQuality
SIO_000300: 1.483e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.996e0

VQSLOD
type: SiteQuality
SIO_000300: 3.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

GenotypeQuality
all individuals: 399
bin: 7.5e0
variant carriers: 270

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 126

GenotypeQuality
all individuals: 448
bin: 3.25e1
variant carriers: 436

GenotypeQuality
all individuals: 581
bin: 6.75e1
variant carriers: 56

GenotypeQuality
all individuals: 51831
bin: 9.75e1
variant carriers: 51575

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 100

GenotypeQuality
all individuals: 132
bin: 9.25e1
variant carriers: 91

GenotypeQuality
all individuals: 344
bin: 2.75e1
variant carriers: 327

East Asian
type: Population
allele count: 6049
allele frequency: 7.068240243047441e-1
allele num: 8558
num of homozygotes: 2124

Other
type: Population
allele count: 624
allele frequency: 7.665847665847666e-1
allele num: 814
num of homozygotes: 241

South Asian
type: Population
allele count: 8344
allele frequency: 7.983161117489476e-1
allele num: 10452
num of homozygotes: 3321

European (Finnish)
type: Population
allele count: 5095
allele frequency: 7.705686630369026e-1
allele num: 6612
num of homozygotes: 1969

African
type: Population
allele count: 7150
allele frequency: 7.387890059929737e-1
allele num: 9678
num of homozygotes: 2659

Latino
type: Population
allele count: 6367
allele frequency: 5.547133646976825e-1
allele num: 11478
num of homozygotes: 1820

European (Non-Finnish)
type: Population
allele count: 52170
allele frequency: 8.072352540694436e-1
allele num: 64628
num of homozygotes: 21064

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 4.856703e6

FS
type: SiteQuality
SIO_000300: 7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.28e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

VQSLOD
type: SiteQuality
SIO_000300: 4.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

QD
type: SiteQuality
SIO_000300: 2.753e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

GenotypeQuality
all individuals: 2253
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51831
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547316952404531e-5
allele num: 64628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

FS
type: SiteQuality
SIO_000300: 7.41e-1

DP
type: SiteQuality
SIO_000300: 4.856703e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.28e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 2.753e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

VQSLOD
type: SiteQuality
SIO_000300: 4.81e0

GenotypeQuality
all individuals: 509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2673
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64676
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.884303749764462e-4
allele num: 10614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.92e0

VQSLOD
type: SiteQuality
SIO_000300: 6.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

QD
type: SiteQuality
SIO_000300: 1.636e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

DP
type: SiteQuality
SIO_000300: 1.717116e6