5-19473780-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473780
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473780
    reference: chr 5
allele count: 4
allele frequency: 3.3178500331785e-5
allele num: 120560
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*94C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*94C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1928C>T
  hgvsp: ENSP00000371710.1:p.Pro643Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1928C>T
  hgvsp: ENSP00000425093.1:p.Pro643Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1928C>T
  hgvsp: ENSP00000274170.3:p.Pro643Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*94C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.179C>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9006
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro643Leu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

5-19473781-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473781
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473781
    reference: chr 5
allele count: 3
allele frequency: 2.492853819052051e-5
allele num: 120344
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1927C>A
  hgvsp: ENSP00000425093.1:p.Pro643Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1927C>A
  hgvsp: ENSP00000371710.1:p.Pro643Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*93C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1927C>A
  hgvsp: ENSP00000274170.3:p.Pro643Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*93C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*93C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.178C>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4369
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro643Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

5-19473790-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473790
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473790
    reference: chr 5
allele count: 33
allele frequency: 2.752155855420079e-4
allele num: 119906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.169A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*84A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*84A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1918A>G
  hgvsp: ENSP00000274170.3:p.Lys640Glu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1918A>G
  hgvsp: ENSP00000425093.1:p.Lys640Glu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1918A>G
  hgvsp: ENSP00000371710.1:p.Lys640Glu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*84A>G
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys640Glu
num of homozygotes: 1
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-19473793-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473793
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473793
    reference: chr 5
allele count: 1
allele frequency: 8.356033892073466e-6
allele num: 119674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*81A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.166A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*81A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1915A>G
  hgvsp: ENSP00000274170.3:p.Ser639Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1915A>G
  hgvsp: ENSP00000371710.1:p.Ser639Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*81A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1915A>G
  hgvsp: ENSP00000425093.1:p.Ser639Gly
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser639Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-19473795-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473795
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473795
    reference: chr 5
allele count: 2
allele frequency: 1.674536990522121e-5
allele num: 119436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1913G>T
  hgvsp: ENSP00000274170.3:p.Arg638Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*79G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*79G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1913G>T
  hgvsp: ENSP00000371710.1:p.Arg638Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*79G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1913G>T
  hgvsp: ENSP00000425093.1:p.Arg638Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.164G>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5131
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg638Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

5-19473795-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473795
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473795
    reference: chr 5
allele count: 2
allele frequency: 1.674536990522121e-5
allele num: 119436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1913G>A
  hgvsp: ENSP00000274170.3:p.Arg638His
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*79G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*79G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*79G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.164G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1913G>A
  hgvsp: ENSP00000425093.1:p.Arg638His
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1913G>A
  hgvsp: ENSP00000371710.1:p.Arg638His
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44765
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg638His
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

5-19473796-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473796
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473796
    reference: chr 5
allele count: 1
allele frequency: 8.391232839928842e-6
allele num: 119172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*78C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.163C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1912C>T
  hgvsp: ENSP00000274170.3:p.Arg638Cys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1912C>T
  hgvsp: ENSP00000425093.1:p.Arg638Cys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*78C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1912C>T
  hgvsp: ENSP00000371710.1:p.Arg638Cys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*78C>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg638Cys
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/5-19473797-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473797
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473797
    reference: chr 5
allele count: 1
allele frequency: 8.390951198227832e-6
allele num: 119176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1911G>T
  hgvsp: ENSP00000371710.1:p.Arg637Ser
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*77G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1911G>T
  hgvsp: ENSP00000274170.3:p.Arg637Ser
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1911G>T
  hgvsp: ENSP00000425093.1:p.Arg637Ser
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*77G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*77G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.162G>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7527
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg637Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

5-19473798-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473798
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473798
    reference: chr 5
allele count: 9
allele frequency: 7.555660028879412e-5
allele num: 119116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*76G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*76G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1910G>A
  hgvsp: ENSP00000274170.3:p.Arg637Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1910G>A
  hgvsp: ENSP00000425093.1:p.Arg637Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.161G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*76G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1910G>A
  hgvsp: ENSP00000371710.1:p.Arg637Lys
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44762
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7495
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1990
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg637Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

5-19473804-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473804
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473804
    reference: chr 5
allele count: 2
allele frequency: 1.689417488849845e-5
allele num: 118384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*70C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1904C>A
  hgvsp: ENSP00000425093.1:p.Thr635Asn
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*70C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1904C>A
  hgvsp: ENSP00000274170.3:p.Thr635Asn
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*70C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1904C>A
  hgvsp: ENSP00000371710.1:p.Thr635Asn
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.155C>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr635Asn
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

5-19473808-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473808
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473808
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 118158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1900A>C
  hgvsp: ENSP00000274170.3:p.Ile634Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*66A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.151A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*66A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1900A>C
  hgvsp: ENSP00000371710.1:p.Ile634Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1900A>C
  hgvsp: ENSP00000425093.1:p.Ile634Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*66A>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile634Leu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

5-19473813-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473813
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473813
    reference: chr 5
allele count: 1
allele frequency: 8.498776176230622e-6
allele num: 117664
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1895T>C
  hgvsp: ENSP00000274170.3:p.Leu632Pro
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1895T>C
  hgvsp: ENSP00000371710.1:p.Leu632Pro
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*61T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*61T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*61T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1895T>C
  hgvsp: ENSP00000425093.1:p.Leu632Pro
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.146T>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6277
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu632Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

5-19473815-TACC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473815
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473812
    reference: chr 5
allele count: 1
allele frequency: 8.526457597926366e-6
allele num: 117282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1890_1892delGGT
  hgvsp: ENSP00000371710.1:p.Val631del
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*56_*58delGGT
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*56_*58delGGT
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1890_1892delGGT
  hgvsp: ENSP00000425093.1:p.Val631del
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*56_*58delGGT
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1890_1892delGGT
  hgvsp: ENSP00000274170.3:p.Val631del
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.141_143delGGT
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3265
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val631del
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: TACC
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

5-19473823-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473823
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473823
    reference: chr 5
allele count: 3
allele frequency: 2.584290956704512e-5
allele num: 116086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1885A>G
  hgvsp: ENSP00000371710.1:p.Ile629Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*51A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1885A>G
  hgvsp: ENSP00000274170.3:p.Ile629Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*51A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1885A>G
  hgvsp: ENSP00000425093.1:p.Ile629Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.136A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*51A>G
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44762
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile629Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

5-19473842-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473842
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473842
    reference: chr 5
allele count: 1
allele frequency: 8.830178016388811e-6
allele num: 113248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*49-17T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1883-17T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*49-17T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.134-17T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*49-17T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1883-17T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1883-17T>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

5-19473845-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473845
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473845
    reference: chr 5
allele count: 1
allele frequency: 8.876580031245562e-6
allele num: 112656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*49-20C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1883-20C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1883-20C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1883-20C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.134-20C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*49-20C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*49-20C>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44757
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-19473852-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473852
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473852
    reference: chr 5
allele count: 505
allele frequency: 4.538836260358433e-3
allele num: 111262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1883-27C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1883-27C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*49-27C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.134-27C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1883-27C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*49-27C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*49-27C>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4527
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 1.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 9.75e1
  variant carriers: 380
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4884
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 4
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

5-19473852-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473852
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473852
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 111262
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1883-27C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.134-27C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1883-27C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*49-27C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*49-27C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*49-27C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1883-27C>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4884
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

5-19473853-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473853
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473853
    reference: chr 5
allele count: 3
allele frequency: 2.703238479698679e-5
allele num: 110978
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1883-28T>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1883-28T>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1883-28T>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.134-28T>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*49-28T>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*49-28T>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*49-28T>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5763
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4780
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ

5-19473865-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473865
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473865
    reference: chr 5
allele count: 1
allele frequency: 9.182399177257034e-6
allele num: 108904
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1883-40T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.134-40T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*49-40T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1883-40T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*49-40T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*49-40T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1883-40T>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5763
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-19473867-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473867
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473867
    reference: chr 5
allele count: 2
allele frequency: 1.843861784120662e-5
allele num: 108468
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1883-42C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*49-42C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1883-42C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1883-42C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.134-42C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*49-42C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*49-42C>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 44775
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genotype quality: GenotypeQuality
  all individuals: 56
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/5-19473877-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19473877
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19473877
    reference: chr 5
allele count: 1
allele frequency: 9.347192103492111e-6
allele num: 106984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1883-52G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl transcript: ENST00000510297
  gene symbol: CDH18
  hgvsc: ENST00000510297.1:n.134-52G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1883-52G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1883-52G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*49-52G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*49-52G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*49-52G>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
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genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 315
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

5-19483359-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483359
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483357
    reference: chr 5
allele count: 1
allele frequency: 8.902499821950003e-6
allele num: 112328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+49_*48+50delAG
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+49_*48+50delAG
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+49_1882+50delAG
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+49_1882+50delAG
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+49_*48+50delAG
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+49_1882+50delAG
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3508
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 276
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5738
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: CCT
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

5-19483360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483360
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483360
    reference: chr 5
allele count: 3
allele frequency: 2.670845055375521e-5
allele num: 112324
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+50G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+50G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+50G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+50G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+50G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+50G>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
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genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
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genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6080
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genotype depth: GenotypeDepth
  all individuals: 11
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 56
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
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genotype quality: GenotypeQuality
  all individuals: 5033
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 9522
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genotype quality: GenotypeQuality
  all individuals: 590
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
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genotype quality: GenotypeQuality
  all individuals: 19734
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

5-19483364-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483364
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483364
    reference: chr 5
allele count: 1
allele frequency: 8.8974304220941e-6
allele num: 112392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+46G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+46G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+46G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+46G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+46G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+46G>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19495
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 80
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genotype depth: GenotypeDepth
  all individuals: 11
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13784
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 105
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genotype quality: GenotypeQuality
  all individuals: 5716
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
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genotype quality: GenotypeQuality
  all individuals: 465
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genotype quality: GenotypeQuality
  all individuals: 594
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3703
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genotype quality: GenotypeQuality
  all individuals: 20176
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-19483368-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483368
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483368
    reference: chr 5
allele count: 2
allele frequency: 1.778916284199666e-5
allele num: 112428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+42G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+42G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+42G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+42G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+42G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+42G>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13779
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19582
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 14
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genotype quality: GenotypeQuality
  all individuals: 389
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

5-19483372-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483372
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483372
    reference: chr 5
allele count: 1
allele frequency: 8.879890599747811e-6
allele num: 112614
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+38T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+38T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+38T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+38T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+38T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+38T>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5708
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5000
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-19483373-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483373
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483373
    reference: chr 5
allele count: 1
allele frequency: 8.875949726620749e-6
allele num: 112664
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+37A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+37A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+37A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+37A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+37A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+37A>G
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6778
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4538
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 946
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 9601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4997
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

5-19483379-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483379
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483379
    reference: chr 5
allele count: 2
allele frequency: 1.769942830846564e-5
allele num: 112998
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+31A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+31A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+31A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+31A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+31A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+31A>G
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6778
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19757
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4538
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
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genotype quality: GenotypeQuality
  all individuals: 424
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5706
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

5-19483382-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483382
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483382
    reference: chr 5
allele count: 3
allele frequency: 2.649334134020983e-5
allele num: 113236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+28A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+28A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+28A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+28A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+28A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+28A>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13780
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5003
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

5-19483384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483384
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483384
    reference: chr 5
allele count: 1
allele frequency: 8.825813740026831e-6
allele num: 113304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+26G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+26G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+26G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+26G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+26G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+26G>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21778
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4533
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3415
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9629
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-19483384-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483384
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483384
    reference: chr 5
allele count: 1
allele frequency: 8.825813740026831e-6
allele num: 113304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+26G>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+26G>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+26G>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+26G>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+26G>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+26G>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5705
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4533
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9629
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3415
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

5-19483399-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483399
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483399
    reference: chr 5
allele count: 3
allele frequency: 2.610239097901368e-5
allele num: 114932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+11C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+11C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+11C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+11C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+11C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+11C>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13837
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20129
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9686
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23008
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum

5-19483406-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483406
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483406
    reference: chr 5
allele count: 1
allele frequency: 8.609408361457401e-6
allele num: 116152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*48+4A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1882+4A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1882+4A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1882+4A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*48+4A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*48+4A>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5000
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23835
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 2624
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 443
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genotype quality: GenotypeQuality
  all individuals: 4547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5706
  bin: 9.75e1
  variant carriers: 1
hgvs: c.1882+4A>C
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-19483411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483411
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483411
    reference: chr 5
allele count: 138
allele frequency: 1.177836195418388e-3
allele num: 117164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*47G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1881G>A
  hgvsp: ENST00000382275.1:c.1881G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1881G>A
  hgvsp: ENST00000274170.4:c.1881G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*47G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*47G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1881G>A
  hgvsp: ENST00000507958.1:c.1881G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20440
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13866
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 5751
  bin: 9.75e1
  variant carriers: 138
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4991
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1881G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

5-19483414-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483414
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483414
    reference: chr 5
allele count: 12
allele frequency: 1.018848700967906e-4
allele num: 117780
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*44C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1878C>A
  hgvsp: ENST00000274170.4:c.1878C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1878C>A
  hgvsp: ENST00000507958.1:c.1878C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1878C>A
  hgvsp: ENST00000382275.1:c.1878C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*44C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*44C>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20573
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5633
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5002
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu626Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

5-19483422-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483422
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483422
    reference: chr 5
allele count: 11
allele frequency: 9.25240562546262e-5
allele num: 118888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*36C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*36C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1870C>A
  hgvsp: ENSP00000274170.3:p.Leu624Ile
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1870C>A
  hgvsp: ENSP00000371710.1:p.Leu624Ile
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*36C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1870C>A
  hgvsp: ENSP00000425093.1:p.Leu624Ile
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10593
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5008
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9847
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4569
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu624Ile
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

5-19483423-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483423
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483423
    reference: chr 5
allele count: 12
allele frequency: 1.007912110064002e-4
allele num: 119058
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1869T>C
  hgvsp: ENST00000382275.1:c.1869T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1869T>C
  hgvsp: ENST00000274170.4:c.1869T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*35T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*35T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1869T>C
  hgvsp: ENST00000507958.1:c.1869T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*35T>C
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13914
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20796
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5015
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25803
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3690
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5618
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val623Val
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD

5-19483425-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483425
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483425
    reference: chr 5
allele count: 1
allele frequency: 8.382651264942076e-6
allele num: 119294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1867G>A
  hgvsp: ENSP00000274170.3:p.Val623Ile
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1867G>A
  hgvsp: ENSP00000425093.1:p.Val623Ile
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1867G>A
  hgvsp: ENSP00000371710.1:p.Val623Ile
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*33G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*33G>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*33G>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4575
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5607
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5007
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val623Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

5-19483429-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483429
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483429
    reference: chr 5
allele count: 4
allele frequency: 3.339121143315079e-5
allele num: 119792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*29C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1863C>T
  hgvsp: ENST00000507958.1:c.1863C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1863C>T
  hgvsp: ENST00000274170.4:c.1863C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*29C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*29C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1863C>T
  hgvsp: ENST00000382275.1:c.1863C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13929
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11017
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26246
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5011
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu621Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

5-19483429-GAGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483429
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483426
    reference: chr 5
allele count: 1
allele frequency: 8.347802858287698e-6
allele num: 119792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1860_1862delTCT
  hgvsp: ENSP00000371710.1:p.Leu621del
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*26_*28delTCT
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1860_1862delTCT
  hgvsp: ENSP00000425093.1:p.Leu621del
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*26_*28delTCT
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*26_*28delTCT
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1860_1862delTCT
  hgvsp: ENSP00000274170.3:p.Leu621del
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 20965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5609
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu621del
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: GAGA
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

5-19483437-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483437
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483437
    reference: chr 5
allele count: 2
allele frequency: 1.661460756296936e-5
allele num: 120376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*21A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1855A>G
  hgvsp: ENSP00000274170.3:p.Ile619Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*21A>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1855A>G
  hgvsp: ENSP00000425093.1:p.Ile619Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1855A>G
  hgvsp: ENSP00000371710.1:p.Ile619Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*21A>G
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21035
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5605
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile619Val
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-19483444-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483444
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483444
    reference: chr 5
allele count: 1
allele frequency: 8.274446853227862e-6
allele num: 120854
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1848A>C
  hgvsp: ENSP00000371710.1:p.Leu616Phe
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*14A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*14A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*14A>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1848A>C
  hgvsp: ENSP00000425093.1:p.Leu616Phe
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1848A>C
  hgvsp: ENSP00000274170.3:p.Leu616Phe
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9888
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3672
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4986
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu616Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-19483448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483448
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483448
    reference: chr 5
allele count: 1
allele frequency: 8.264872638312644e-6
allele num: 120994
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1844C>T
  hgvsp: ENSP00000425093.1:p.Ala615Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*10C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1844C>T
  hgvsp: ENSP00000274170.3:p.Ala615Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1844C>T
  hgvsp: ENSP00000371710.1:p.Ala615Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*10C>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*10C>T
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21167
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6755
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala615Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

5-19483448-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483448
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483448
    reference: chr 5
allele count: 13
allele frequency: 1.074433442980644e-4
allele num: 120994
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*10C>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1844C>G
  hgvsp: ENSP00000371710.1:p.Ala615Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1844C>G
  hgvsp: ENSP00000425093.1:p.Ala615Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*10C>G
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1844C>G
  hgvsp: ENSP00000274170.3:p.Ala615Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*10C>G
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13904
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6755
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 27164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3665
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala615Gly
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-19483451-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483451
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483451
    reference: chr 5
allele count: 30
allele frequency: 2.478191911181602e-4
allele num: 121056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*7G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*7G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1841G>T
  hgvsp: ENSP00000371710.1:p.Gly614Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*7G>T
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1841G>T
  hgvsp: ENSP00000274170.3:p.Gly614Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1841G>T
  hgvsp: ENSP00000425093.1:p.Gly614Val
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13894
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21204
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5597
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1774
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4544
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4973
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly614Val
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

5-19483454-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483454
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483454
    reference: chr 5
allele count: 3
allele frequency: 2.477577919825579e-5
allele num: 121086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*4C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1838C>A
  hgvsp: ENSP00000274170.3:p.Thr613Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1838C>A
  hgvsp: ENSP00000371710.1:p.Thr613Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*4C>A
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1838C>A
  hgvsp: ENSP00000425093.1:p.Thr613Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*4C>A
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4954
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4529
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr613Lys
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

5-19483456-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483456
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483456
    reference: chr 5
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.*2T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.*2T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.*2T>C
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1836T>C
  hgvsp: ENST00000274170.4:c.1836T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1836T>C
  hgvsp: ENST00000382275.1:c.1836T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1836T>C
  hgvsp: ENST00000507958.1:c.1836T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4525
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4954
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser612Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/5-19483462-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483462
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483462
    reference: chr 5
allele count: 5
allele frequency: 4.141472707694856e-5
allele num: 120730
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1724T>G
  hgvsp: ENSP00000424931.1:p.Val575Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1721T>G
  hgvsp: ENSP00000422138.1:p.Val574Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1322T>G
  hgvsp: ENSP00000427383.1:p.Val441Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1830T>G
  hgvsp: ENST00000382275.1:c.1830T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1830T>G
  hgvsp: ENST00000507958.1:c.1830T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1830T>G
  hgvsp: ENST00000274170.4:c.1830T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21103
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13767
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9715
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Val574Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

5-19483462-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483462
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483462
    reference: chr 5
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1724T>C
  hgvsp: ENSP00000424931.1:p.Val575Ala
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1322T>C
  hgvsp: ENSP00000427383.1:p.Val441Ala
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1721T>C
  hgvsp: ENSP00000422138.1:p.Val574Ala
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1830T>C
  hgvsp: ENST00000382275.1:c.1830T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1830T>C
  hgvsp: ENST00000507958.1:c.1830T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1830T>C
  hgvsp: ENST00000274170.4:c.1830T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26705
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4447
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val574Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

5-19483468-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483468
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483468
    reference: chr 5
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1824G>C
  hgvsp: ENST00000382275.1:c.1824G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1824G>C
  hgvsp: ENST00000274170.4:c.1824G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1824G>C
  hgvsp: ENST00000507958.1:c.1824G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1718G>C
  hgvsp: ENSP00000424931.1:p.Arg573Pro
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1715G>C
  hgvsp: ENSP00000422138.1:p.Arg572Pro
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1316G>C
  hgvsp: ENSP00000427383.1:p.Arg439Pro
  variant of: http://identifiers.org/hgnc/1757
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6656
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5437
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3561
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4889
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg572Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

5-19483469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483469
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483469
    reference: chr 5
allele count: 4
allele frequency: 3.301310620316266e-5
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1823C>T
  hgvsp: ENSP00000425093.1:p.Ser608Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1315C>T
  hgvsp: ENSP00000427383.1:p.Arg439Trp
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1823C>T
  hgvsp: ENSP00000274170.3:p.Ser608Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1823C>T
  hgvsp: ENSP00000371710.1:p.Ser608Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1714C>T
  hgvsp: ENSP00000422138.1:p.Arg572Trp
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1717C>T
  hgvsp: ENSP00000424931.1:p.Arg573Trp
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21126
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3553
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser608Leu
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

5-19483476-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483476
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483476
    reference: chr 5
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1816C>G
  hgvsp: ENSP00000425093.1:p.Leu606Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1816C>G
  hgvsp: ENSP00000371710.1:p.Leu606Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1816C>G
  hgvsp: ENSP00000274170.3:p.Leu606Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1308C>G
  hgvsp: ENST00000515257.2:c.1308C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1707C>G
  hgvsp: ENST00000502796.1:c.1707C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1710C>G
  hgvsp: ENST00000506372.1:c.1710C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6625
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9606
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27079
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5428
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu606Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

5-19483485-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483485
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483485
    reference: chr 5
allele count: 1
allele frequency: 8.255456856982466e-6
allele num: 121132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1807G>A
  hgvsp: ENSP00000274170.3:p.Glu603Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1701G>A
  hgvsp: ENST00000506372.1:c.1701G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1698G>A
  hgvsp: ENST00000502796.1:c.1698G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1807G>A
  hgvsp: ENSP00000371710.1:p.Glu603Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1807G>A
  hgvsp: ENSP00000425093.1:p.Glu603Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1299G>A
  hgvsp: ENST00000515257.2:c.1299G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13299
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu603Lys
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

5-19483487-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483487
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483487
    reference: chr 5
allele count: 2
allele frequency: 1.651500388102591e-5
allele num: 121102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1297C>T
  hgvsp: ENSP00000427383.1:p.Gln433Ter
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1699C>T
  hgvsp: ENSP00000424931.1:p.Gln567Ter
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1696C>T
  hgvsp: ENSP00000422138.1:p.Gln566Ter
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1805C>T
  hgvsp: ENSP00000274170.3:p.Ala602Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1805C>T
  hgvsp: ENSP00000371710.1:p.Ala602Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1805C>T
  hgvsp: ENSP00000425093.1:p.Ala602Val
  variant of: http://identifiers.org/hgnc/1757
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11899
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5423
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3486
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4748
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln566Ter
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

5-19483490-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483490
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483490
    reference: chr 5
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1802A>G
  hgvsp: ENSP00000371710.1:p.His601Arg
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1802A>G
  hgvsp: ENSP00000274170.3:p.His601Arg
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1294A>G
  hgvsp: ENSP00000427383.1:p.Met432Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1802A>G
  hgvsp: ENSP00000425093.1:p.His601Arg
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1696A>G
  hgvsp: ENSP00000424931.1:p.Met566Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1693A>G
  hgvsp: ENSP00000422138.1:p.Met565Val
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19942
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4722
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His601Arg
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

5-19483493-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483493
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483493
    reference: chr 5
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1799G>A
  hgvsp: ENSP00000371710.1:p.Cys600Tyr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1291G>A
  hgvsp: ENSP00000427383.1:p.Ala431Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1799G>A
  hgvsp: ENSP00000274170.3:p.Cys600Tyr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1799G>A
  hgvsp: ENSP00000425093.1:p.Cys600Tyr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1693G>A
  hgvsp: ENSP00000424931.1:p.Ala565Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1690G>A
  hgvsp: ENSP00000422138.1:p.Ala564Thr
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9132
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4268
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys600Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

5-19483499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483499
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483499
    reference: chr 5
allele count: 2
allele frequency: 1.652728655009421e-5
allele num: 121012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1285G>A
  hgvsp: ENSP00000427383.1:p.Gly429Arg
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1793G>A
  hgvsp: ENSP00000274170.3:p.Arg598Gln
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1687G>A
  hgvsp: ENSP00000424931.1:p.Gly563Arg
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1684G>A
  hgvsp: ENSP00000422138.1:p.Gly562Arg
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1793G>A
  hgvsp: ENSP00000371710.1:p.Arg598Gln
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1793G>A
  hgvsp: ENSP00000425093.1:p.Arg598Gln
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6502
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8903
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5396
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg598Gln
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

5-19483500-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483500
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483500
    reference: chr 5
allele count: 3
allele frequency: 2.480527856327827e-5
allele num: 120942
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1792C>T
  hgvsp: ENSP00000371710.1:p.Arg598Trp
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1792C>T
  hgvsp: ENSP00000425093.1:p.Arg598Trp
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1792C>T
  hgvsp: ENSP00000274170.3:p.Arg598Trp
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1686C>T
  hgvsp: ENST00000506372.1:c.1686C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1284C>T
  hgvsp: ENST00000515257.2:c.1284C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1683C>T
  hgvsp: ENST00000502796.1:c.1683C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12923
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19008
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6490
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12424
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3395
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg598Trp
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

5-19483505-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483505
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483505
    reference: chr 5
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1681G>A
  hgvsp: ENSP00000424931.1:p.Val561Met
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1678G>A
  hgvsp: ENSP00000422138.1:p.Val560Met
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1787G>A
  hgvsp: ENSP00000425093.1:p.Arg596His
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1279G>A
  hgvsp: ENSP00000427383.1:p.Val427Met
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1787G>A
  hgvsp: ENSP00000371710.1:p.Arg596His
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1787G>A
  hgvsp: ENSP00000274170.3:p.Arg596His
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12151
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg596His
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

5-19483506-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483506
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483506
    reference: chr 5
allele count: 4
allele frequency: 3.305675845426598e-5
allele num: 121004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1677C>T
  hgvsp: ENST00000502796.1:c.1677C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1680C>T
  hgvsp: ENST00000506372.1:c.1680C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1786C>T
  hgvsp: ENSP00000371710.1:p.Arg596Cys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1278C>T
  hgvsp: ENST00000515257.2:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1786C>T
  hgvsp: ENSP00000274170.3:p.Arg596Cys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1786C>T
  hgvsp: ENSP00000425093.1:p.Arg596Cys
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18699
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25373
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8794
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4087
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4485
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg596Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

5-19483518-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483518
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483518
    reference: chr 5
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1266G>C
  hgvsp: ENST00000515257.2:c.1266G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1774G>C
  hgvsp: ENSP00000425093.1:p.Glu592Gln
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1668G>C
  hgvsp: ENST00000506372.1:c.1668G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1774G>C
  hgvsp: ENSP00000371710.1:p.Glu592Gln
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1774G>C
  hgvsp: ENSP00000274170.3:p.Glu592Gln
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1665G>C
  hgvsp: ENST00000502796.1:c.1665G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4015
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5365
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu592Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

5-19483518-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483518
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483518
    reference: chr 5
allele count: 11
allele frequency: 9.09466721785862e-5
allele num: 120950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1266G>A
  hgvsp: ENST00000515257.2:c.1266G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1668G>A
  hgvsp: ENST00000506372.1:c.1668G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1774G>A
  hgvsp: ENSP00000425093.1:p.Glu592Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1774G>A
  hgvsp: ENSP00000371710.1:p.Glu592Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1774G>A
  hgvsp: ENSP00000274170.3:p.Glu592Lys
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1665G>A
  hgvsp: ENST00000502796.1:c.1665G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11802
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14308
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17888
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8526
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu592Lys
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

5-19483519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483519
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483519
    reference: chr 5
allele count: 2
allele frequency: 1.653931394925738e-5
allele num: 120924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1667C>T
  hgvsp: ENSP00000424931.1:p.Ala556Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1265C>T
  hgvsp: ENSP00000427383.1:p.Ala422Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1664C>T
  hgvsp: ENSP00000422138.1:p.Ala555Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1773C>T
  hgvsp: ENST00000274170.4:c.1773C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1773C>T
  hgvsp: ENST00000382275.1:c.1773C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1773C>T
  hgvsp: ENST00000507958.1:c.1773C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3345
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8528
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala555Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

5-19483519-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483519
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483519
    reference: chr 5
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1773C>G
  hgvsp: ENSP00000274170.3:p.Cys591Trp
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1664C>G
  hgvsp: ENSP00000422138.1:p.Ala555Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1667C>G
  hgvsp: ENSP00000424931.1:p.Ala556Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1773C>G
  hgvsp: ENSP00000371710.1:p.Cys591Trp
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1265C>G
  hgvsp: ENSP00000427383.1:p.Ala422Gly
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1773C>G
  hgvsp: ENSP00000425093.1:p.Cys591Trp
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25067
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3345
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys591Trp
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS

http://identifiers.org/exac.variant/5-19483531-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483531
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483531
    reference: chr 5
allele count: 1
allele frequency: 8.26801600687899e-6
allele num: 120948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1655G>T
  hgvsp: ENSP00000424931.1:p.Gly552Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1761G>T
  hgvsp: ENSP00000274170.3:p.Arg587Ser
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1761G>T
  hgvsp: ENSP00000371710.1:p.Arg587Ser
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1253G>T
  hgvsp: ENSP00000427383.1:p.Gly418Val
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1761G>T
  hgvsp: ENSP00000425093.1:p.Arg587Ser
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1652G>T
  hgvsp: ENSP00000422138.1:p.Gly551Val
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15093
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25694
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8607
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg587Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ

5-19483531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483531
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483531
    reference: chr 5
allele count: 1
allele frequency: 8.26801600687899e-6
allele num: 120948
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1761G>A
  hgvsp: ENST00000382275.1:c.1761G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1253G>A
  hgvsp: ENSP00000427383.1:p.Gly418Glu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1761G>A
  hgvsp: ENST00000274170.4:c.1761G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1652G>A
  hgvsp: ENSP00000422138.1:p.Gly551Glu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1655G>A
  hgvsp: ENSP00000424931.1:p.Gly552Glu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1761G>A
  hgvsp: ENST00000507958.1:c.1761G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17665
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5351
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25694
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly551Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

5-19483532-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483532
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483532
    reference: chr 5
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1252G>C
  hgvsp: ENSP00000427383.1:p.Gly418Arg
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1760G>C
  hgvsp: ENSP00000371710.1:p.Arg587Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1760G>C
  hgvsp: ENSP00000274170.3:p.Arg587Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1651G>C
  hgvsp: ENSP00000422138.1:p.Gly551Arg
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1760G>C
  hgvsp: ENSP00000425093.1:p.Arg587Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1654G>C
  hgvsp: ENSP00000424931.1:p.Gly552Arg
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25807
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4492
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg587Thr
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum

5-19483534-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483534
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483534
    reference: chr 5
allele count: 1
allele frequency: 8.267605866693123e-6
allele num: 120954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1652C>G
  hgvsp: ENSP00000424931.1:p.Ser551Ter
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1758C>G
  hgvsp: ENSP00000371710.1:p.Ile586Met
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1649C>G
  hgvsp: ENSP00000422138.1:p.Ser550Ter
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1250C>G
  hgvsp: ENSP00000427383.1:p.Ser417Ter
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1758C>G
  hgvsp: ENSP00000274170.3:p.Ile586Met
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1758C>G
  hgvsp: ENSP00000425093.1:p.Ile586Met
  variant of: http://identifiers.org/hgnc/1757
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17601
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4495
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1682
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3370
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25288
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5350
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser550Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

5-19483536-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483536
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483536
    reference: chr 5
allele count: 13
allele frequency: 1.074540014216991e-4
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1647A>C
  hgvsp: ENST00000502796.1:c.1647A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1756A>C
  hgvsp: ENSP00000371710.1:p.Ile586Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1248A>C
  hgvsp: ENST00000515257.2:c.1248A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1650A>C
  hgvsp: ENST00000506372.1:c.1650A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1756A>C
  hgvsp: ENSP00000425093.1:p.Ile586Leu
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1756A>C
  hgvsp: ENSP00000274170.3:p.Ile586Leu
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15218
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3385
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4069
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile586Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

5-19483542-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483542
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483542
    reference: chr 5
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1750C>A
  hgvsp: ENSP00000371710.1:p.Leu584Ile
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1641C>A
  hgvsp: ENST00000502796.1:c.1641C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1750C>A
  hgvsp: ENSP00000425093.1:p.Leu584Ile
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1750C>A
  hgvsp: ENSP00000274170.3:p.Leu584Ile
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1644C>A
  hgvsp: ENST00000506372.1:c.1644C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1242C>A
  hgvsp: ENST00000515257.2:c.1242C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8642
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5355
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu584Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

5-19483542-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483542
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483542
    reference: chr 5
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1644C>T
  hgvsp: ENST00000506372.1:c.1644C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1641C>T
  hgvsp: ENST00000502796.1:c.1641C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000371710
  ensembl transcript: ENST00000382275
  gene symbol: CDH18
  hgvsc: ENST00000382275.1:c.1750C>T
  hgvsp: ENSP00000371710.1:p.Leu584Phe
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000427383
  ensembl transcript: ENST00000515257
  gene symbol: CDH18
  hgvsc: ENST00000515257.2:c.1242C>T
  hgvsp: ENST00000515257.2:c.1242C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1750C>T
  hgvsp: ENSP00000425093.1:p.Leu584Phe
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1750C>T
  hgvsp: ENSP00000274170.3:p.Leu584Phe
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17663
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8642
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu584Phe
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-19483544-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19483544
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 19483544
    reference: chr 5
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000424931
  ensembl transcript: ENST00000506372
  gene symbol: CDH18
  hgvsc: ENST00000506372.1:c.1642C>A
  hgvsp: ENSP00000424931.1:p.Pro548Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000422138
  ensembl transcript: ENST00000502796
  gene symbol: CDH18
  hgvsc: ENST00000502796.1:c.1639C>A
  hgvsp: ENSP00000422138.1:p.Pro547Thr
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000274170
  ensembl transcript: ENST00000274170
  gene symbol: CDH18
  hgvsc: ENST00000274170.4:c.1748C>A
  hgvsp: ENSP00000274170.3:p.Thr583Asn
  variant of: http://identifiers.org/hgnc/1757
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145526
  ensembl protein: ENSP00000425093
  ensembl transcript: ENST00000507958
  gene symbol: CDH18
  hgvsc: ENST00000507958.1:c.1748C>A
  hgvsp: ENSP00000425093.1:p.Thr583Asn
  variant of: http://identifiers.org/hgnc/1757
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
hgvs: p.Thr583Asn
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44763
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.459010722933241e-4
allele num: 11564
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

QD
type: SiteQuality
SIO_000300: 1.197e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.055e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.26e-1

DP
type: SiteQuality
SIO_000300: 3.522312e6

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44763
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 650
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.53857791225416e-5
allele num: 66100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.519441e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.506e0

QD
type: SiteQuality
SIO_000300: 1.186e1

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e-1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44783
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1376
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 4.857906242409522e-4
allele num: 65872
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

QD
type: SiteQuality
SIO_000300: 1.341e1

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 5.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

DP
type: SiteQuality
SIO_000300: 3.514517e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.025e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.22e-1

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44763
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 831
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8065
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520727516043675e-5
allele num: 65758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.29e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 3.021e0

VQSLOD
type: SiteQuality
SIO_000300: -1.787e0

MQ
type: SiteQuality
SIO_000300: 5.742e1

MQRankSum
type: SiteQuality
SIO_000300: -1.109e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.729e0

DP
type: SiteQuality
SIO_000300: 3.508332e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44765
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.234567901234568e-4
allele num: 16200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.505776e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.035e0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

FS
type: SiteQuality
SIO_000300: 5.51e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeQuality
all individuals: 113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523136442562525e-5
allele num: 65654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.007252215954875e-4
allele num: 9928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.035e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 5.51e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

DP
type: SiteQuality
SIO_000300: 3.505776e6

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

GenotypeQuality
all individuals: 819
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44762
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1119
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.381e0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.174e1

DP
type: SiteQuality
SIO_000300: 3.501699e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44762
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52597204419215e-5
allele num: 65532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

FS
type: SiteQuality
SIO_000300: 2.518e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
SIO_000300: 1.325e1

MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.503e0

DP
type: SiteQuality
SIO_000300: 3.501651e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.046998604001861e-3
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9842
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.409e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

DP
type: SiteQuality
SIO_000300: 3.502033e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 1.214e1

GenotypeQuality
all individuals: 1119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44761
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 220
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.066449970868725e-5
allele num: 65222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.173e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 6.907e0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 3.490655e6

GenotypeQuality
all individuals: 2627
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6774
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 879
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44759
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 3.486849e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44759
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3039
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64924
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.040799333888426e-4
allele num: 9608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 4.137e0

DP
type: SiteQuality
SIO_000300: 3.47885e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.102e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQRankSum
type: SiteQuality
SIO_000300: 7.73e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

GenotypeQuality
all individuals: 297
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44759
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 804
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5835
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544115376300917e-5
allele num: 64762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9536
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -3.074e0

MQ
type: SiteQuality
SIO_000300: 5.661e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

QD
type: SiteQuality
SIO_000300: 1.688e1

DP
type: SiteQuality
SIO_000300: 3.473195e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.97e-1

GenotypeQuality
all individuals: 588
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.019114281868354e-4
allele num: 14858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64346
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.52e-1

FS
type: SiteQuality
SIO_000300: 3.505e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.121e0

DP
type: SiteQuality
SIO_000300: 3.454411e6

MQ
type: SiteQuality
SIO_000300: 5.942e1

QD
type: SiteQuality
SIO_000300: 1.577e1

GenotypeQuality
all individuals: 155
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44758
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5321
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.579479403588577e-5
allele num: 63312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.48e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

VQSLOD
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

DP
type: SiteQuality
SIO_000300: 3.415866e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.407e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.62e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

GenotypeQuality
all individuals: 110
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2403
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58473582453805e-5
allele num: 63102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.43e-1

DP
type: SiteQuality
SIO_000300: 3.410691e6

MQRankSum
type: SiteQuality
SIO_000300: -1.116e0

FS
type: SiteQuality
SIO_000300: 3.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

QD
type: SiteQuality
SIO_000300: 1.266e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 741
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 242
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2051
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 574
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 44865
bin: 9.75e1
variant carriers: 500

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 6.75e1
variant carriers: 1

South Asian
type: Population
allele count: 71
allele frequency: 5.638500635324015e-3
allele num: 12592
num of homozygotes: 2

Other
type: Population
allele count: 4
allele frequency: 4.830917874396135e-3
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.699909338168631e-3
allele num: 8824
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.929486055078056e-3
allele num: 11402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 386
allele frequency: 6.164558579276862e-3
allele num: 62616
num of homozygotes: 2

East Asian
type: Population
allele count: 1
allele frequency: 1.18962645729241e-4
allele num: 8406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.099181073703367e-4
allele num: 6594
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 3.429735e6

QD
type: SiteQuality
SIO_000300: 1.405e1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.873e0

GenotypeQuality
all individuals: 574
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44865
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8824
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

DP
type: SiteQuality
SIO_000300: 3.429735e6

VQSLOD
type: SiteQuality
SIO_000300: 6.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.873e0

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

GenotypeQuality
all individuals: 544
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44775
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12436
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.57227911407478e-4
allele num: 8398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8820
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.403846e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.375e0

QD
type: SiteQuality
SIO_000300: 1.224e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 3520
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44775
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.616031027795734e-5
allele num: 61880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.388494e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.89e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 1.4276e1

VQSLOD
type: SiteQuality
SIO_000300: -1.148e0

QD
type: SiteQuality
SIO_000300: 1.28e1

MQRankSum
type: SiteQuality
SIO_000300: -4.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

GenotypeQuality
all individuals: 539
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 735
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.314814814814815e-4
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61722
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 3.386033e6

QD
type: SiteQuality
SIO_000300: 1.428e1

GenotypeQuality
all individuals: 2382
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 847
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GenotypeQuality
all individuals: 100
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.632972990626735e-5
allele num: 61238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.01e-1

DP
type: SiteQuality
SIO_000300: 3.380393e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.01e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1910
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.213193292795283e-5
allele num: 10854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63990
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

DP
type: SiteQuality
SIO_000300: 1.742437e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 5.707e1

QD
type: SiteQuality
SIO_000300: 1.573e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5725
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.688232536333802e-5
allele num: 63990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.77e-1

QD
type: SiteQuality
SIO_000300: 1.332e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

FS
type: SiteQuality
SIO_000300: 9.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

DP
type: SiteQuality
SIO_000300: 1.742357e6

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4544
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GenotypeQuality
all individuals: 981
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562353529356623e-5
allele num: 64006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10890
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.292e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.782e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.37e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 1.74383e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 682
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GenotypeQuality
all individuals: 3703
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10924
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.124511795032026e-5
allele num: 64010
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.14e-1

FS
type: SiteQuality
SIO_000300: 3.177e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 1.07e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 1.746544e6

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4540
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variant carriers: 0

GenotypeQuality
all individuals: 20931
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.561231499406732e-5
allele num: 64052
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.31e0

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.75026e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5708
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GenotypeQuality
all individuals: 21022
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560744162816831e-5
allele num: 64072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e0

VQSLOD
type: SiteQuality
SIO_000300: -3.631e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.750888e6

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9615
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.982553528945282e-4
allele num: 10088
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64166
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.98e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.557e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.44e-1

QD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.11332503113325e-5
allele num: 64240
num of homozygotes: 0

African
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South Asian
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allele frequency: 8.793527963418924e-5
allele num: 11372
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.65e-1

DP
type: SiteQuality
SIO_000300: 1.76038e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 362
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GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64254
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 11402
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African
type: Population
allele count: 1
allele frequency: 9.859988168014199e-5
allele num: 10142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.362e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 1.763255e6

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.022e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4997
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.763255e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

QD
type: SiteQuality
SIO_000300: 1.197e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.022e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.362e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.505e0

GenotypeQuality
all individuals: 592
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4998
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5706
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1786
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.422871910838314e-4
allele num: 12382
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.799e0

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 1.173e1

FS
type: SiteQuality
SIO_000300: 2.203e0

DP
type: SiteQuality
SIO_000300: 1.781711e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-1

GenotypeQuality
all individuals: 9738
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3695
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65030
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.318e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.572e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.697e0

DP
type: SiteQuality
SIO_000300: 1.79457e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
all individuals: 372
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9755
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4548
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13894
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.931207762952695e-4
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65294
num of homozygotes: 0

African
type: Population
allele count: 128
allele frequency: 1.238869531552458e-2
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.293577981651376e-3
allele num: 872
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

DP
type: SiteQuality
SIO_000300: 1.807703e6

VQSLOD
type: SiteQuality
SIO_000300: 6.12e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.424e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

QD
type: SiteQuality
SIO_000300: 1.215e1

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9804
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24837
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3687
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 8.390434904209202e-4
allele num: 14302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.159e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.548e0

DP
type: SiteQuality
SIO_000300: 1.8081e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.98e-1

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5623
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 25593
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.275806077476224e-3
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.107e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

FS
type: SiteQuality
SIO_000300: 2.454e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.129e0

DP
type: SiteQuality
SIO_000300: 1.819409e6

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1231
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.91765637371338e-4
allele num: 15156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65840
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.820777e6

VQSLOD
type: SiteQuality
SIO_000300: 9.23e-1

FS
type: SiteQuality
SIO_000300: 4.901e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9841
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517220452131695e-5
allele num: 65910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15314
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.141e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.575e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
type: SiteQuality
SIO_000300: -4.922e-1

DP
type: SiteQuality
SIO_000300: 1.823698e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.66e-1

GenotypeQuality
all individuals: 2148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5609
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.55819902788437e-4
allele num: 15636
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.843e1

FS
type: SiteQuality
SIO_000300: 1.3684e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.057e0

DP
type: SiteQuality
SIO_000300: 1.828037e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.515e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeQuality
all individuals: 155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 180
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variant carriers: 0

GenotypeQuality
all individuals: 2148
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 26246
bin: 6.25e1
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GenotypeQuality
all individuals: 5011
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51336299524804e-5
allele num: 66078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

DP
type: SiteQuality
SIO_000300: 1.828037e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

MQ
type: SiteQuality
SIO_000300: 5.843e1

FS
type: SiteQuality
SIO_000300: 1.3684e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.515e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.057e0

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeQuality
all individuals: 137
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
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variant carriers: 0

GenotypeQuality
all individuals: 4568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4998
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variant carriers: 0

GenotypeQuality
all individuals: 26714
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.24687656171914e-5
allele num: 16008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.833696e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.056e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 1.1822e1

QD
type: SiteQuality
SIO_000300: 1.727e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5601
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.13421666053245e-5
allele num: 16302
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

VQSLOD
type: SiteQuality
SIO_000300: 4.02e-1

DP
type: SiteQuality
SIO_000300: 1.83846e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.215e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.208e0

GenotypeQuality
all individuals: 5604
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4550
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

DP
type: SiteQuality
SIO_000300: 1.838837e6

FS
type: SiteQuality
SIO_000300: 3.456e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.86e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4550
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.804022971225834e-4
allele num: 66518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.838837e6

FS
type: SiteQuality
SIO_000300: 3.456e0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.86e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.91e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 124
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GenotypeQuality
all individuals: 27162
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Latino
type: Population
allele count: 30
allele frequency: 2.595604775912788e-3
allele num: 11558
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.198e1

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

FS
type: SiteQuality
SIO_000300: 1.194e0

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.854e0

DP
type: SiteQuality
SIO_000300: 1.839042e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

GenotypeQuality
all individuals: 3654
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5565
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9853
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variant carriers: 0

GenotypeQuality
all individuals: 27124
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variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.507211538461539e-5
allele num: 66560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.89e-1

FS
type: SiteQuality
SIO_000300: 5.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

QD
type: SiteQuality
SIO_000300: 1.712e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.031e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

DP
type: SiteQuality
SIO_000300: 1.837899e6

GenotypeQuality
all individuals: 5562
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3653
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27001
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 162
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variant carriers: 0

GenotypeQuality
all individuals: 2135
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.836713e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

FS
type: SiteQuality
SIO_000300: 1.505e0

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.184e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 3.211e1

GenotypeQuality
all individuals: 4870
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 232
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26705
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.529987760097919e-4
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.522840343735866e-5
allele num: 66330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.818e1

FS
type: SiteQuality
SIO_000300: 1.68775e2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

QD
type: SiteQuality
SIO_000300: 8.4e-1

DP
type: SiteQuality
SIO_000300: 1.835702e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.968e0

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.307e2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2070
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GenotypeQuality
all individuals: 3548
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.968e0

FS
type: SiteQuality
SIO_000300: 1.68775e2

QD
type: SiteQuality
SIO_000300: 8.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

MQ
type: SiteQuality
SIO_000300: 5.818e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.307e2

DP
type: SiteQuality
SIO_000300: 1.835702e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
all individuals: 2079
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 249
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GenotypeQuality
all individuals: 207
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GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50154659299078e-5
allele num: 66598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.317e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

VQSLOD
type: SiteQuality
SIO_000300: 8.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.828686e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2080
bin: 9.25e1
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GenotypeQuality
all individuals: 192
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504504504504505e-5
allele num: 66600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
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SIO_000300: -8.69e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 1.653e0

DP
type: SiteQuality
SIO_000300: 1.827887e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.45e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.844e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

DP
type: SiteQuality
SIO_000300: 1.822145e6

MQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

QD
type: SiteQuality
SIO_000300: 1.511e1

FS
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.841e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.474e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.574e0

QD
type: SiteQuality
SIO_000300: 2.104e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

DP
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SIO_000300: 1.812743e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.782e0

MQRankSum
type: SiteQuality
SIO_000300: -2.94e-1

VQSLOD
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.94e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.213592233009709e-4
allele num: 16480
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e-1

FS
type: SiteQuality
SIO_000300: 7.147e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.064e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 1.809402e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.292e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 9.416e0

DP
type: SiteQuality
SIO_000300: 1.803582e6

MQRankSum
type: SiteQuality
SIO_000300: -1.894e0

QD
type: SiteQuality
SIO_000300: 8.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.319e0

VQSLOD
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SIO_000300: -2.954e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.853e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

DP
type: SiteQuality
SIO_000300: 1.796092e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e-1

FS
type: SiteQuality
SIO_000300: 3.784e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.06e1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502900598154438e-5
allele num: 66538
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.786139e6

QD
type: SiteQuality
SIO_000300: 1.413e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8604
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.510735550610453e-5
allele num: 66508
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.785468e6

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.803e0

ReadPosRankSum
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VQSLOD
type: SiteQuality
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MQ
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BaseQRankSum
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MQRankSum
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10360
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66534
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European (Finnish)
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allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.889999999999999e-1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.778784e6

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

Other
type: Population
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East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.50815976918222e-5
allele num: 66546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.77758e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele num: 902
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South Asian
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allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 9.06e-1

MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5365
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 4015
bin: 7.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.069434328720563e-4
allele num: 16476
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

FS
type: SiteQuality
SIO_000300: 7.015e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

QD
type: SiteQuality
SIO_000300: 1.367e1

DP
type: SiteQuality
SIO_000300: 1.767877e6

GenotypeQuality
all individuals: 604
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4004
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25067
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5356
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 961
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1670
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.308e1

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

DP
type: SiteQuality
SIO_000300: 1.767151e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8528
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 863
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4004
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

DP
type: SiteQuality
SIO_000300: 1.767151e6

QD
type: SiteQuality
SIO_000300: 1.308e1

FS
type: SiteQuality
SIO_000300: 8.68e-1

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5351
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
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variant carriers: 0

GenotypeQuality
all individuals: 4043
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
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variant carriers: 0

GenotypeQuality
all individuals: 3369
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503307276007216e-5
allele num: 66520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

QD
type: SiteQuality
SIO_000300: 1.257e1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.315e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.766627e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4043
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8607
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503307276007216e-5
allele num: 66520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.315e0

QD
type: SiteQuality
SIO_000300: 1.257e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.766627e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.28e0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5353
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4049
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2027
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variant carriers: 0

GenotypeQuality
all individuals: 343
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variant carriers: 0

GenotypeQuality
all individuals: 8593
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3371
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.266e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.76681e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.58e-1

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.18e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 4056
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
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variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8587
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2025
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.832e-1

FS
type: SiteQuality
SIO_000300: 1.485e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.766264e6

QD
type: SiteQuality
SIO_000300: 1.684e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.287e0

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
all individuals: 4512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5360
bin: 9.75e1
variant carriers: 13

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.510223048327138e-3
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

DP
type: SiteQuality
SIO_000300: 1.766157e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

QD
type: SiteQuality
SIO_000300: 1.533e1

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

GenotypeQuality
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4075
bin: 7.25e1
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GenotypeQuality
all individuals: 4535
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.39e-1

DP
type: SiteQuality
SIO_000300: 1.768324e6

FS
type: SiteQuality
SIO_000300: 1.735e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.781e0

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.91e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 675
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variant carriers: 0

GenotypeQuality
all individuals: 778
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3400
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5355
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 717
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.735e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.781e0

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 1.768324e6

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.91e-1