5-153065834-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065834
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065834
    reference: chr 5
allele count: 2
allele frequency: 1.648478454386601e-5
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.872G>A
  hgvsp: ENSP00000427864.2:p.Arg291His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.839G>A
  hgvsp: ENSP00000427920.1:p.Arg280His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1109G>A
  hgvsp: ENSP00000428994.1:p.Arg370His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1109G>A
  hgvsp: ENSP00000415569.2:p.Arg370His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1220G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1079G>A
  hgvsp: ENSP00000339343.5:p.Arg360His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1079G>A
  hgvsp: ENSP00000285900.4:p.Arg360His
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg370His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/5-153065835-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065835
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065835
    reference: chr 5
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.840C>A
  hgvsp: ENST00000518142.1:c.840C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1110C>A
  hgvsp: ENST00000518783.1:c.1110C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.873C>A
  hgvsp: ENST00000521843.2:c.873C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1110C>A
  hgvsp: ENST00000448073.4:c.1110C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1080C>A
  hgvsp: ENST00000285900.5:c.1080C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1221C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1080C>A
  hgvsp: ENST00000340592.5:c.1080C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg370Arg
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-153065840-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065840
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065840
    reference: chr 5
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.845C>T
  hgvsp: ENSP00000427920.1:p.Thr282Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1115C>T
  hgvsp: ENSP00000415569.2:p.Thr372Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1085C>T
  hgvsp: ENSP00000285900.4:p.Thr362Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1115C>T
  hgvsp: ENSP00000428994.1:p.Thr372Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.878C>T
  hgvsp: ENSP00000427864.2:p.Thr293Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1226C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1085C>T
  hgvsp: ENSP00000339343.5:p.Thr362Ile
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr372Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

5-153065846-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065846
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065846
    reference: chr 5
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1232A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1091A>G
  hgvsp: ENSP00000285900.4:p.Tyr364Cys
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.851A>G
  hgvsp: ENSP00000427920.1:p.Tyr284Cys
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1121A>G
  hgvsp: ENSP00000428994.1:p.Tyr374Cys
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.884A>G
  hgvsp: ENSP00000427864.2:p.Tyr295Cys
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1121A>G
  hgvsp: ENSP00000415569.2:p.Tyr374Cys
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1091A>G
  hgvsp: ENSP00000339343.5:p.Tyr364Cys
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7871
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr374Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

5-153065847-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065847
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065847
    reference: chr 5
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1092C>T
  hgvsp: ENST00000285900.5:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.885C>T
  hgvsp: ENST00000521843.2:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1122C>T
  hgvsp: ENST00000518783.1:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.852C>T
  hgvsp: ENST00000518142.1:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1122C>T
  hgvsp: ENST00000448073.4:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1092C>T
  hgvsp: ENST00000340592.5:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1233C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr374Tyr
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

5-153065849-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065849
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065849
    reference: chr 5
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1124C>T
  hgvsp: ENSP00000415569.2:p.Thr375Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1094C>T
  hgvsp: ENSP00000339343.5:p.Thr365Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1124C>T
  hgvsp: ENSP00000428994.1:p.Thr375Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1094C>T
  hgvsp: ENSP00000285900.4:p.Thr365Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.854C>T
  hgvsp: ENSP00000427920.1:p.Thr285Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.887C>T
  hgvsp: ENSP00000427864.2:p.Thr296Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1235C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42447
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7871
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr375Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

5-153065850-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065850
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065850
    reference: chr 5
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1095G>A
  hgvsp: ENST00000285900.5:c.1095G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.855G>A
  hgvsp: ENST00000518142.1:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1125G>A
  hgvsp: ENST00000518783.1:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1095G>A
  hgvsp: ENST00000340592.5:c.1095G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1236G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1125G>A
  hgvsp: ENST00000448073.4:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.888G>A
  hgvsp: ENST00000521843.2:c.888G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr375Thr
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

5-153065850-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065850
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065850
    reference: chr 5
allele count: 3
allele frequency: 2.473451619286327e-5
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1236G>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1095G>T
  hgvsp: ENST00000285900.5:c.1095G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1095G>T
  hgvsp: ENST00000340592.5:c.1095G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1125G>T
  hgvsp: ENST00000518783.1:c.1125G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.888G>T
  hgvsp: ENST00000521843.2:c.888G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1125G>T
  hgvsp: ENST00000448073.4:c.1125G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.855G>T
  hgvsp: ENST00000518142.1:c.855G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr375Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-153065851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065851
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065851
    reference: chr 5
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.889C>T
  hgvsp: ENSP00000427864.2:p.Leu297Phe
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1126C>T
  hgvsp: ENSP00000428994.1:p.Leu376Phe
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1237C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1126C>T
  hgvsp: ENSP00000415569.2:p.Leu376Phe
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.856C>T
  hgvsp: ENSP00000427920.1:p.Leu286Phe
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1096C>T
  hgvsp: ENSP00000339343.5:p.Leu366Phe
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1096C>T
  hgvsp: ENSP00000285900.4:p.Leu366Phe
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu376Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

5-153065856-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065856
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065856
    reference: chr 5
allele count: 12
allele frequency: 9.8956014051754e-5
allele num: 121266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1101C>T
  hgvsp: ENST00000285900.5:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.861C>T
  hgvsp: ENST00000518142.1:c.861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1101C>T
  hgvsp: ENST00000340592.5:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1131C>T
  hgvsp: ENST00000518783.1:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1131C>T
  hgvsp: ENST00000448073.4:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.894C>T
  hgvsp: ENST00000521843.2:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1242C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2125
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His377His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-153065857-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065857
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065857
    reference: chr 5
allele count: 2
allele frequency: 1.649321304283287e-5
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.862G>A
  hgvsp: ENSP00000427920.1:p.Val288Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1102G>A
  hgvsp: ENSP00000339343.5:p.Val368Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1243G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1132G>A
  hgvsp: ENSP00000428994.1:p.Val378Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1132G>A
  hgvsp: ENSP00000415569.2:p.Val378Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.895G>A
  hgvsp: ENSP00000427864.2:p.Val299Met
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1102G>A
  hgvsp: ENSP00000285900.4:p.Val368Met
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42463
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val378Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

5-153065867-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065867
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065867
    reference: chr 5
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1142T>C
  hgvsp: ENSP00000428994.1:p.Met381Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.872T>C
  hgvsp: ENSP00000427920.1:p.Met291Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1112T>C
  hgvsp: ENSP00000339343.5:p.Met371Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1253T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1112T>C
  hgvsp: ENSP00000285900.4:p.Met371Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.905T>C
  hgvsp: ENSP00000427864.2:p.Met302Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1142T>C
  hgvsp: ENSP00000415569.2:p.Met381Thr
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10298
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7856
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met381Thr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD

5-153065877-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065877
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065877
    reference: chr 5
allele count: 5
allele frequency: 4.134623335814107e-5
allele num: 120930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.882C>T
  hgvsp: ENST00000518142.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1122C>T
  hgvsp: ENST00000285900.5:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1152C>T
  hgvsp: ENST00000518783.1:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1263C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.915C>T
  hgvsp: ENST00000521843.2:c.915C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1152C>T
  hgvsp: ENST00000448073.4:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1122C>T
  hgvsp: ENST00000340592.5:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp384Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS

5-153065878-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065878
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065878
    reference: chr 5
allele count: 36
allele frequency: 2.978258711406731e-4
allele num: 120876
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1153G>A
  hgvsp: ENSP00000428994.1:p.Gly385Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1123G>A
  hgvsp: ENSP00000339343.5:p.Gly375Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1123G>A
  hgvsp: ENSP00000285900.4:p.Gly375Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.916G>A
  hgvsp: ENSP00000427864.2:p.Gly306Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1153G>A
  hgvsp: ENSP00000415569.2:p.Gly385Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.883G>A
  hgvsp: ENSP00000427920.1:p.Gly295Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1264G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13203
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2131
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly385Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/5-153065886-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065886
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065886
    reference: chr 5
allele count: 1
allele frequency: 8.32514693884347e-6
allele num: 120118
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1161A>C
  hgvsp: ENST00000518783.1:c.1161A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.924A>C
  hgvsp: ENST00000521843.2:c.924A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1272A>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.891A>C
  hgvsp: ENST00000518142.1:c.891A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1131A>C
  hgvsp: ENST00000285900.5:c.1131A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1161A>C
  hgvsp: ENST00000448073.4:c.1161A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1131A>C
  hgvsp: ENST00000340592.5:c.1131A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7471
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2008
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41278
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg387Arg
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

5-153065886-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065886
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065886
    reference: chr 5
allele count: 1
allele frequency: 8.32514693884347e-6
allele num: 120118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1272A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1131A>G
  hgvsp: ENST00000340592.5:c.1131A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.891A>G
  hgvsp: ENST00000518142.1:c.891A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1161A>G
  hgvsp: ENST00000518783.1:c.1161A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1131A>G
  hgvsp: ENST00000285900.5:c.1131A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1161A>G
  hgvsp: ENST00000448073.4:c.1161A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.924A>G
  hgvsp: ENST00000521843.2:c.924A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41278
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg387Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

5-153065895-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065895
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065895
    reference: chr 5
allele count: 3
allele frequency: 2.533441426834212e-5
allele num: 118416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+6G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+6G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+6G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+6G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+6G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+6G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+6G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11189
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3336
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1164+6G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

5-153065896-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065896
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065897
    reference: chr 5
allele count: 1
allele frequency: 8.466110161025414e-6
allele num: 118118
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+12dupC
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+12dupC
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+12dupC
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+12dupC
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+12dupC
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+12dupC
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+12dupC
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38237
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1164+12dupC
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

5-153065898-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065898
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065898
    reference: chr 5
allele count: 1
allele frequency: 8.499209573509664e-6
allele num: 117658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+9C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+9C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+9C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+9C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+9C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+9C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+9C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/5-153065900-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065900
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065900
    reference: chr 5
allele count: 1
allele frequency: 8.537522410996328e-6
allele num: 117130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+11C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+11C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+11C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+11C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+11C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+11C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+11C>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10203
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 4927
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP

5-153065907-T-TTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065907
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065909
    reference: chr 5
allele count: 1
allele frequency: 8.66145824310981e-6
allele num: 115454
alternate allele: TTC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+20_1164+21dupCT
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+20_1134+21dupCT
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+20_894+21dupCT
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+20_1275+21dupCT
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+20_927+21dupCT
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+20_1134+21dupCT
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+20_1164+21dupCT
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2525
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
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genotype quality: GenotypeQuality
  all individuals: 1892
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genotype quality: GenotypeQuality
  all individuals: 1732
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genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7282
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum

5-153065908-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065908
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065908
    reference: chr 5
allele count: 1
allele frequency: 8.674531575294935e-6
allele num: 115280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+19T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+19T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+19T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+19T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+19T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+19T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+19T>C
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10151
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

5-153065928-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065928
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065928
    reference: chr 5
allele count: 1
allele frequency: 9.059119815918686e-6
allele num: 110386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+39G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+39G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+39G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+39G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+39G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+39G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+39G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3308
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3372
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7411
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-153065932-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065932
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065932
    reference: chr 5
allele count: 2
allele frequency: 1.824551160414538e-5
allele num: 109616
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+43G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+43G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+43G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+43G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+43G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+43G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+43G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15994
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3876
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6915
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3307
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4289
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-153065939-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153065939
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153065939
    reference: chr 5
allele count: 2
allele frequency: 1.87111743132999e-5
allele num: 106888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1134+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1134+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.927+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1275+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1164+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.894+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1164+50G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15664
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2190
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4316
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3423
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7619
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/5-153077569-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077569
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077569
    reference: chr 5
allele count: 13
allele frequency: 1.194040817826111e-4
allele num: 108874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1276-35C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1135-35C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1165-35C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.928-35C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1165-35C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1135-35C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.895-35C>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11408
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9586
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21081
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7962
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2496
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5111
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5918
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

5-153077583-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077583
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077583
    reference: chr 5
allele count: 1
allele frequency: 8.745845723281442e-6
allele num: 114340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1276-21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1165-21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1135-21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.895-21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1165-21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.928-21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1135-21C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30021
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37691
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

5-153077604-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077604
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077604
    reference: chr 5
allele count: 1
allele frequency: 8.402655239055541e-6
allele num: 119010
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1135A>G
  hgvsp: ENSP00000285900.4:p.Ile379Val
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1135A>G
  hgvsp: ENSP00000339343.5:p.Ile379Val
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1165A>G
  hgvsp: ENSP00000415569.2:p.Ile389Val
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.895A>G
  hgvsp: ENSP00000427920.1:p.Ile299Val
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1165A>G
  hgvsp: ENSP00000428994.1:p.Ile389Val
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1276A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.928A>G
  hgvsp: ENSP00000427864.2:p.Ile310Val
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile389Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

5-153077623-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077623
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077623
    reference: chr 5
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1154A>G
  hgvsp: ENSP00000339343.5:p.Asp385Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1184A>G
  hgvsp: ENSP00000428994.1:p.Asp395Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.914A>G
  hgvsp: ENSP00000427920.1:p.Asp305Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.947A>G
  hgvsp: ENSP00000427864.2:p.Asp316Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1184A>G
  hgvsp: ENSP00000415569.2:p.Asp395Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1154A>G
  hgvsp: ENSP00000285900.4:p.Asp385Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1295A>G
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp395Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

5-153077630-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077630
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077630
    reference: chr 5
allele count: 1
allele frequency: 8.290636555074699e-6
allele num: 120618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1302G>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.921G>T
  hgvsp: ENSP00000427920.1:p.Lys307Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1191G>T
  hgvsp: ENSP00000415569.2:p.Lys397Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.954G>T
  hgvsp: ENSP00000427864.2:p.Lys318Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1161G>T
  hgvsp: ENSP00000339343.5:p.Lys387Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1161G>T
  hgvsp: ENSP00000285900.4:p.Lys387Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1191G>T
  hgvsp: ENSP00000428994.1:p.Lys397Asn
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4412
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys397Asn
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

5-153077638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077638
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077638
    reference: chr 5
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1310C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.929C>T
  hgvsp: ENSP00000427920.1:p.Pro310Leu
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.962C>T
  hgvsp: ENSP00000427864.2:p.Pro321Leu
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1169C>T
  hgvsp: ENSP00000285900.4:p.Pro390Leu
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1169C>T
  hgvsp: ENSP00000339343.5:p.Pro390Leu
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1199C>T
  hgvsp: ENSP00000428994.1:p.Pro400Leu
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1199C>T
  hgvsp: ENSP00000415569.2:p.Pro400Leu
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4425
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2521
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro400Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

5-153077647-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077647
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077647
    reference: chr 5
allele count: 1
allele frequency: 8.273214640280627e-6
allele num: 120872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.938C>T
  hgvsp: ENSP00000427920.1:p.Thr313Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1178C>T
  hgvsp: ENSP00000285900.4:p.Thr393Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1208C>T
  hgvsp: ENSP00000428994.1:p.Thr403Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.971C>T
  hgvsp: ENSP00000427864.2:p.Thr324Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1319C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1178C>T
  hgvsp: ENSP00000339343.5:p.Thr393Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1208C>T
  hgvsp: ENSP00000415569.2:p.Thr403Ile
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2523
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr403Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

5-153077648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077648
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077648
    reference: chr 5
allele count: 2
allele frequency: 1.654506047219603e-5
allele num: 120882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.939C>T
  hgvsp: ENST00000518142.1:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1209C>T
  hgvsp: ENST00000518783.1:c.1209C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1179C>T
  hgvsp: ENST00000340592.5:c.1179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1179C>T
  hgvsp: ENST00000285900.5:c.1179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1320C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.972C>T
  hgvsp: ENST00000521843.2:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1209C>T
  hgvsp: ENST00000448073.4:c.1209C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2524
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr403Thr
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

5-153077649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077649
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077649
    reference: chr 5
allele count: 2
allele frequency: 1.654451301225948e-5
allele num: 120886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1180G>A
  hgvsp: ENSP00000339343.5:p.Asp394Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.940G>A
  hgvsp: ENSP00000427920.1:p.Asp314Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1210G>A
  hgvsp: ENSP00000428994.1:p.Asp404Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1210G>A
  hgvsp: ENSP00000415569.2:p.Asp404Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1180G>A
  hgvsp: ENSP00000285900.4:p.Asp394Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.973G>A
  hgvsp: ENSP00000427864.2:p.Asp325Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1321G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4437
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp404Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

5-153077650-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077650
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077650
    reference: chr 5
allele count: 1
allele frequency: 8.271572260455268e-6
allele num: 120896
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1181A>G
  hgvsp: ENSP00000285900.4:p.Asp394Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1322A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1211A>G
  hgvsp: ENSP00000428994.1:p.Asp404Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1211A>G
  hgvsp: ENSP00000415569.2:p.Asp404Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.974A>G
  hgvsp: ENSP00000427864.2:p.Asp325Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.941A>G
  hgvsp: ENSP00000427920.1:p.Asp314Gly
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1181A>G
  hgvsp: ENSP00000339343.5:p.Asp394Gly
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2523
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp404Gly
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

5-153077652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077652
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077652
    reference: chr 5
allele count: 2
allele frequency: 1.654341820106871e-5
allele num: 120894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1213G>A
  hgvsp: ENSP00000415569.2:p.Ala405Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1213G>A
  hgvsp: ENSP00000428994.1:p.Ala405Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1183G>A
  hgvsp: ENSP00000285900.4:p.Ala395Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.943G>A
  hgvsp: ENSP00000427920.1:p.Ala315Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1324G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.976G>A
  hgvsp: ENSP00000427864.2:p.Ala326Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1183G>A
  hgvsp: ENSP00000339343.5:p.Ala395Thr
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala405Thr
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

5-153077654-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077654
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077654
    reference: chr 5
allele count: 190
allele frequency: 1.571520735802551e-3
allele num: 120902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.978C>T
  hgvsp: ENST00000521843.2:c.978C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1326C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1185C>T
  hgvsp: ENST00000340592.5:c.1185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1185C>T
  hgvsp: ENST00000285900.5:c.1185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.945C>T
  hgvsp: ENST00000518142.1:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1215C>T
  hgvsp: ENST00000518783.1:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1215C>T
  hgvsp: ENST00000448073.4:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15846
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 37768
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala405Ala
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

5-153077666-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077666
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077666
    reference: chr 5
allele count: 2
allele frequency: 1.655272871732905e-5
allele num: 120826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.957C>T
  hgvsp: ENST00000518142.1:c.957C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1227C>T
  hgvsp: ENST00000518783.1:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1338C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1227C>T
  hgvsp: ENST00000448073.4:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.990C>T
  hgvsp: ENST00000521843.2:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1197C>T
  hgvsp: ENST00000285900.5:c.1197C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1197C>T
  hgvsp: ENST00000340592.5:c.1197C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly409Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

5-153077667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077667
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077667
    reference: chr 5
allele count: 4
allele frequency: 3.311587243765937e-5
allele num: 120788
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1228G>A
  hgvsp: ENSP00000415569.2:p.Asp410Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1228G>A
  hgvsp: ENSP00000428994.1:p.Asp410Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1198G>A
  hgvsp: ENSP00000285900.4:p.Asp400Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.958G>A
  hgvsp: ENSP00000427920.1:p.Asp320Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1339G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1198G>A
  hgvsp: ENSP00000339343.5:p.Asp400Asn
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.991G>A
  hgvsp: ENSP00000427864.2:p.Asp331Asn
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49741
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp410Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

5-153077675-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077675
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077675
    reference: chr 5
allele count: 2
allele frequency: 1.657302905251993e-5
allele num: 120678
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1236A>T
  hgvsp: ENST00000518783.1:c.1236A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.966A>T
  hgvsp: ENST00000518142.1:c.966A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1206A>T
  hgvsp: ENST00000285900.5:c.1206A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1206A>T
  hgvsp: ENST00000340592.5:c.1206A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.999A>T
  hgvsp: ENST00000521843.2:c.999A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1236A>T
  hgvsp: ENST00000448073.4:c.1236A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1347A>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser412Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

5-153077684-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077684
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077684
    reference: chr 5
allele count: 2
allele frequency: 1.659668398254029e-5
allele num: 120506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1215G>C
  hgvsp: ENSP00000285900.4:p.Gln405His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1215G>C
  hgvsp: ENSP00000339343.5:p.Gln405His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1356G>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1008G>C
  hgvsp: ENSP00000427864.2:p.Gln336His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.975G>C
  hgvsp: ENSP00000427920.1:p.Gln325His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1245G>C
  hgvsp: ENSP00000415569.2:p.Gln415His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1245G>C
  hgvsp: ENSP00000428994.1:p.Gln415His
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49433
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln415His
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

5-153077684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077684
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077684
    reference: chr 5
allele count: 1
allele frequency: 8.298341991270144e-6
allele num: 120506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.975G>A
  hgvsp: ENST00000518142.1:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1245G>A
  hgvsp: ENST00000448073.4:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1008G>A
  hgvsp: ENST00000521843.2:c.1008G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1215G>A
  hgvsp: ENST00000340592.5:c.1215G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1215G>A
  hgvsp: ENST00000285900.5:c.1215G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1245G>A
  hgvsp: ENST00000518783.1:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1356G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln415Gln
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-153077687-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077687
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077687
    reference: chr 5
allele count: 1
allele frequency: 8.307993951780402e-6
allele num: 120366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1011C>T
  hgvsp: ENST00000521843.2:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1248C>T
  hgvsp: ENST00000518783.1:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1248C>T
  hgvsp: ENST00000448073.4:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.978C>T
  hgvsp: ENST00000518142.1:c.978C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1218C>T
  hgvsp: ENST00000340592.5:c.1218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1218C>T
  hgvsp: ENST00000285900.5:c.1218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1359C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49099
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn416Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-153077699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077699
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077699
    reference: chr 5
allele count: 2
allele frequency: 1.675462846611376e-5
allele num: 119370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1371C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1260C>T
  hgvsp: ENST00000448073.4:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.990C>T
  hgvsp: ENST00000518142.1:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1023C>T
  hgvsp: ENST00000521843.2:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1230C>T
  hgvsp: ENST00000340592.5:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1260C>T
  hgvsp: ENST00000518783.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1230C>T
  hgvsp: ENST00000285900.5:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile420Ile
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

5-153077700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077700
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077700
    reference: chr 5
allele count: 4
allele frequency: 3.353903944191038e-5
allele num: 119264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1261G>A
  hgvsp: ENSP00000415569.2:p.Val421Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1024G>A
  hgvsp: ENSP00000427864.2:p.Val342Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.991G>A
  hgvsp: ENSP00000427920.1:p.Val331Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1261G>A
  hgvsp: ENSP00000428994.1:p.Val421Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1231G>A
  hgvsp: ENSP00000285900.4:p.Val411Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1231G>A
  hgvsp: ENSP00000339343.5:p.Val411Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1372G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4249
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47401
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val421Ile
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

5-153077712-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077712
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077712
    reference: chr 5
allele count: 7
allele frequency: 5.988433767922526e-5
allele num: 116892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1003C>T
  hgvsp: ENST00000518142.1:c.1003C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1243C>T
  hgvsp: ENST00000285900.5:c.1243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1036C>T
  hgvsp: ENST00000521843.2:c.1036C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1273C>T
  hgvsp: ENST00000448073.4:c.1273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1273C>T
  hgvsp: ENST00000518783.1:c.1273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1243C>T
  hgvsp: ENST00000340592.5:c.1243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1384C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15195
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30895
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1273C>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

5-153077726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077726
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077726
    reference: chr 5
allele count: 5
allele frequency: 4.376291005846725e-5
allele num: 114252
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+12G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+12G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+12G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+12G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+12G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+12G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+12G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25397
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8010
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

5-153077726-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077726
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077726
    reference: chr 5
allele count: 3
allele frequency: 2.625774603508035e-5
allele num: 114252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+12G>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+12G>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+12G>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+12G>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+12G>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+12G>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+12G>C
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25397
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3521
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

5-153077732-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077732
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077732
    reference: chr 5
allele count: 1
allele frequency: 8.870910510254773e-6
allele num: 112728
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+18C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+18C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+18C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+18C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+18C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+18C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+18C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21455
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9874
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3051
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

5-153077735-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077735
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077735
    reference: chr 5
allele count: 2
allele frequency: 1.782626521917393e-5
allele num: 112194
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+21C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+21C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10602
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4701
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

5-153077738-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077738
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077738
    reference: chr 5
allele count: 1
allele frequency: 8.954315084439191e-6
allele num: 111678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+24G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+24G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+24G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+24G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+24G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+24G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+24G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10629
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23716
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

5-153077739-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077739
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077739
    reference: chr 5
allele count: 5
allele frequency: 4.476355888198535e-5
allele num: 111698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+25G>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+25G>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+25G>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+25G>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+25G>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+25G>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+25G>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17064
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10638
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

5-153077750-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077750
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077750
    reference: chr 5
allele count: 3
allele frequency: 2.740426775796551e-5
allele num: 109472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+36T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+36T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+36T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+36T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+36T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+36T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+36T>C
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9565
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8414
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6514
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13325
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

5-153077754-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077754
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077754
    reference: chr 5
allele count: 1
allele frequency: 9.32331387868504e-6
allele num: 107258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+40A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+40A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+40A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+40A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+40A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+40A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+40A>G
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18143
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8505
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11438
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3758
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8470
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3015
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

5-153077757-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077757
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077757
    reference: chr 5
allele count: 3
allele frequency: 2.810357102709184e-5
allele num: 106748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+43T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+43T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+43T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+43T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+43T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+43T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+43T>C
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16440
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8462
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3081
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3981
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

5-153077764-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153077764
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153077764
    reference: chr 5
allele count: 1
allele frequency: 9.676795045480936e-6
allele num: 103340
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1275+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1005+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1386+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1245+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1245+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1275+50G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1038+50G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9980
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4869
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2535
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1659
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8792
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2974
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

5-153078379-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078379
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078379
    reference: chr 5
allele count: 2
allele frequency: 1.653439153439154e-5
allele num: 120960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-48G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-48G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-48G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-48G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-48G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-48G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-48G>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9460
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15079
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39385
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

5-153078382-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078382
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078382
    reference: chr 5
allele count: 2
allele frequency: 1.652865241896828e-5
allele num: 121002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-45T>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-45T>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-45T>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-45T>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-45T>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-45T>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-45T>A
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-153078385-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078385
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078385
    reference: chr 5
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-42A>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-42A>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-42A>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-42A>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-42A>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-42A>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-42A>C
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7788
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

5-153078392-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078392
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078392
    reference: chr 5
allele count: 1
allele frequency: 8.257911078813503e-6
allele num: 121096
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-35A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-35A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-35A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-35A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-35A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-35A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-35A>G
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42380
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7784
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD

5-153078397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078397
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078397
    reference: chr 5
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-30C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-30C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-30C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-30C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-30C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-30C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-30C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

5-153078399-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078399
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078399
    reference: chr 5
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-28T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-28T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-28T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-28T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-28T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-28T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-28T>C
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29921
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42906
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

5-153078407-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078407
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078407
    reference: chr 5
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-20T>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-20T>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-20T>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-20T>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-20T>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-20T>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-20T>G
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43160
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7851
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-153078413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078413
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078413
    reference: chr 5
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-14C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-14C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-14C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-14C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-14C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-14C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-14C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16716
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-153078415-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078415
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078415
    reference: chr 5
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-12T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-12T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-12T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-12T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-12T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-12T>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-12T>C
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-153078420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078420
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078420
    reference: chr 5
allele count: 4
allele frequency: 3.297663605335619e-5
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1039-7C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1276-7C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1387-7C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1246-7C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1006-7C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1246-7C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1276-7C>T
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1276-7C>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/5-153078445-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078445
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078445
    reference: chr 5
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1294C>A
  hgvsp: ENSP00000415569.2:p.Leu432Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1294C>A
  hgvsp: ENSP00000428994.1:p.Leu432Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1057C>A
  hgvsp: ENSP00000427864.2:p.Leu353Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1024C>A
  hgvsp: ENSP00000427920.1:p.Leu342Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1405C>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1264C>A
  hgvsp: ENSP00000285900.4:p.Leu422Ile
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1264C>A
  hgvsp: ENSP00000339343.5:p.Leu422Ile
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 30257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7897
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu432Ile
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

5-153078456-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078456
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078456
    reference: chr 5
allele count: 5
allele frequency: 4.119634176485128e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1305C>T
  hgvsp: ENST00000448073.4:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1275C>T
  hgvsp: ENST00000285900.5:c.1275C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1305C>T
  hgvsp: ENST00000518783.1:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1275C>T
  hgvsp: ENST00000340592.5:c.1275C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1068C>T
  hgvsp: ENST00000521843.2:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1416C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1035C>T
  hgvsp: ENST00000518142.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn435Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-153078457-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078457
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078457
    reference: chr 5
allele count: 3
allele frequency: 2.471861971227527e-5
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1306G>A
  hgvsp: ENSP00000428994.1:p.Ala436Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1417G>A
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1069G>A
  hgvsp: ENSP00000427864.2:p.Ala357Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1306G>A
  hgvsp: ENSP00000415569.2:p.Ala436Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1276G>A
  hgvsp: ENSP00000339343.5:p.Ala426Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1276G>A
  hgvsp: ENSP00000285900.4:p.Ala426Thr
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1036G>A
  hgvsp: ENSP00000427920.1:p.Ala346Thr
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala436Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

5-153078459-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078459
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078459
    reference: chr 5
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1308C>T
  hgvsp: ENST00000518783.1:c.1308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1419C>T
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1278C>T
  hgvsp: ENST00000285900.5:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1071C>T
  hgvsp: ENST00000521843.2:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1308C>T
  hgvsp: ENST00000448073.4:c.1308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1278C>T
  hgvsp: ENST00000340592.5:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1038C>T
  hgvsp: ENST00000518142.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2226
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala436Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/5-153078460-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078460
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078460
    reference: chr 5
allele count: 6
allele frequency: 4.943642475776152e-5
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1039A>C
  hgvsp: ENSP00000427920.1:p.Asn347His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1309A>C
  hgvsp: ENSP00000428994.1:p.Asn437His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1072A>C
  hgvsp: ENSP00000427864.2:p.Asn358His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1420A>C
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1279A>C
  hgvsp: ENSP00000339343.5:p.Asn427His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1279A>C
  hgvsp: ENSP00000285900.4:p.Asn427His
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1309A>C
  hgvsp: ENSP00000415569.2:p.Asn437His
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43564
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7899
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn437His
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

5-153078461-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 153078461
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 153078461
    reference: chr 5
allele count: 3
allele frequency: 2.471821237888076e-5
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000285900
  ensembl transcript: ENST00000285900
  gene symbol: GRIA1
  hgvsc: ENST00000285900.5:c.1280A>G
  hgvsp: ENSP00000285900.4:p.Asn427Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000428994
  ensembl transcript: ENST00000518783
  gene symbol: GRIA1
  hgvsc: ENST00000518783.1:c.1310A>G
  hgvsp: ENSP00000428994.1:p.Asn437Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000415569
  ensembl transcript: ENST00000448073
  gene symbol: GRIA1
  hgvsc: ENST00000448073.4:c.1310A>G
  hgvsp: ENSP00000415569.2:p.Asn437Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000155511
  ensembl transcript: ENST00000481559
  gene symbol: GRIA1
  hgvsc: ENST00000481559.2:n.1421A>G
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427920
  ensembl transcript: ENST00000518142
  gene symbol: GRIA1
  hgvsc: ENST00000518142.1:c.1040A>G
  hgvsp: ENSP00000427920.1:p.Asn347Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000339343
  ensembl transcript: ENST00000340592
  gene symbol: GRIA1
  hgvsc: ENST00000340592.5:c.1280A>G
  hgvsp: ENSP00000339343.5:p.Asn427Ser
  variant of: http://identifiers.org/hgnc/4571
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155511
  ensembl protein: ENSP00000427864
  ensembl transcript: ENST00000521843
  gene symbol: GRIA1
  hgvsc: ENST00000521843.2:c.1073A>G
  hgvsp: ENSP00000427864.2:p.Asn358Ser
  variant of: http://identifiers.org/hgnc/4571
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn437Ser
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 497
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3497
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2132
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42470
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7879
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997691777331455e-5
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.878e0

DP
type: SiteQuality
SIO_000300: 1.816859e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.896e0

QD
type: SiteQuality
SIO_000300: 1.297e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42477
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.56e-1

QD
type: SiteQuality
SIO_000300: 1.17e1

DP
type: SiteQuality
SIO_000300: 1.816766e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.26e0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7872
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42479
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.816521e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 1.116e1

FS
type: SiteQuality
SIO_000300: 9.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
all individuals: 1246
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2132
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3494
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42454
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.488e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.816192e6

QD
type: SiteQuality
SIO_000300: 7.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.53e0

FS
type: SiteQuality
SIO_000300: 3.782e0

VQSLOD
type: SiteQuality
SIO_000300: -5.750999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.09e-1

GenotypeQuality
all individuals: 2132
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7871
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.473e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.475e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 7.318e0

MQ
type: SiteQuality
SIO_000300: 5.782e1

QD
type: SiteQuality
SIO_000300: 1.221e1

DP
type: SiteQuality
SIO_000300: 1.816069e6

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3492
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.81599e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

QD
type: SiteQuality
SIO_000300: 1.208e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.801e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 1.834e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7868
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

DP
type: SiteQuality
SIO_000300: 1.816022e6

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.232e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.087e0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2169
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42446
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.087e0

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

QD
type: SiteQuality
SIO_000300: 1.232e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

DP
type: SiteQuality
SIO_000300: 1.816022e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3487
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42463
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7871
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2168
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

QD
type: SiteQuality
SIO_000300: 1.206e1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 1.81569e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.886e0

FS
type: SiteQuality
SIO_000300: 3.856e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.276e0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3485
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.298000929800093e-4
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423948612289419e-4
allele num: 16502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

QD
type: SiteQuality
SIO_000300: 1.285e1

DP
type: SiteQuality
SIO_000300: 1.815725e6

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.21e-1

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3474
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2164
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998860433035446e-5
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.265e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 1.815021e6

FS
type: SiteQuality
SIO_000300: 1.385e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.263e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

QD
type: SiteQuality
SIO_000300: 1.387e1

VQSLOD
type: SiteQuality
SIO_000300: -1.018e0

GenotypeQuality
all individuals: 2114
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 42388
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.175e0

MQ
type: SiteQuality
SIO_000300: 5.877e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.548e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.417e-1

DP
type: SiteQuality
SIO_000300: 1.813253e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.408e1

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 7
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7715
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variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.681647940074906e-4
allele num: 8544
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

DP
type: SiteQuality
SIO_000300: 1.806136e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.338e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 482
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variant carriers: 0

GenotypeQuality
all individuals: 52
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GenotypeQuality
all individuals: 1238
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 42090
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variant carriers: 0

GenotypeQuality
all individuals: 7708
bin: 6.75e1
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GenotypeQuality
all individuals: 3477
bin: 9.75e1
variant carriers: 36

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 25
allele frequency: 1.517727051966974e-3
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.203224642040669e-4
allele num: 66488
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.344116268166901e-4
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.804809e6

VQSLOD
type: SiteQuality
SIO_000300: 5.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 1.418e1

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 223
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variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 1319
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 2055
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variant carriers: 0

GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 1187
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variant carriers: 0

GenotypeQuality
all individuals: 3393
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

DP
type: SiteQuality
SIO_000300: 1.776211e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.305e1

VQSLOD
type: SiteQuality
SIO_000300: 5.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 227
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 2008
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GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 606
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GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 1187
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GenotypeQuality
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GenotypeQuality
all individuals: 3393
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variant carriers: 1

GenotypeQuality
all individuals: 8
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

FS
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.776211e6

QD
type: SiteQuality
SIO_000300: 1.305e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.45e-1

GenotypeQuality
all individuals: 1926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536098310291859e-5
allele num: 65100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8204
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.947040498442368e-4
allele num: 10272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 2.134e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

DP
type: SiteQuality
SIO_000300: 1.714191e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.248e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.87e-1

QD
type: SiteQuality
SIO_000300: 1.069e1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.4e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 656
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 410
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 432
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GenotypeQuality
all individuals: 1100
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.748488984207447e-5
allele num: 10258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.929e0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 1.702609e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 2.129e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

GenotypeQuality
all individuals: 4255
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 6845
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GenotypeQuality
all individuals: 1877
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variant carriers: 0

GenotypeQuality
all individuals: 564
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

East Asian
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allele count: 0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.544878727019929e-5
allele num: 64730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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Other
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African
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MQRankSum
type: SiteQuality
SIO_000300: -4.85e-1

InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.947e1

FS
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ReadPosRankSum
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DP
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 64436
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Other
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South Asian
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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Latino
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele num: 868
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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DP
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BaseQRankSum
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VQSLOD
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FS
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SIO_000300: 0.0e0

QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.58e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6444
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.576391954095466e-5
allele num: 63436
num of homozygotes: 0

Other
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East Asian
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African
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South Asian
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VQSLOD
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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FS
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MQRankSum
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SIO_000300: -1.109e0

InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.649838315845047e-5
allele num: 60612
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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Other
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Latino
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.2826e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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allele frequency: 0.0e0
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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allele num: 60214
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African
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MQ
type: SiteQuality
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DP
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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allele num: 58678
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Latino
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European (Finnish)
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South Asian
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Other
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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BaseQRankSum
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FS
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QD
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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allele num: 61612
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Latino
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African
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East Asian
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South Asian
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Other
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ReadPosRankSum
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MQ
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MQRankSum
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ClippingRankSum
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FS
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QD
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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East Asian
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African
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European (Non-Finnish)
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BaseQRankSum
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DP
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QD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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East Asian
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Other
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South Asian
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MQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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SIO_000300: 3.92e0

QD
type: SiteQuality
SIO_000300: 1.75e1

GenotypeQuality
all individuals: 506
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49535
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 278
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 3.272e0

QD
type: SiteQuality
SIO_000300: 9.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-1

DP
type: SiteQuality
SIO_000300: 1.52945e6

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49726
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.159911297277319e-5
allele num: 16234
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.198e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.811e0

FS
type: SiteQuality
SIO_000300: 1.147e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.26e-1

DP
type: SiteQuality
SIO_000300: 1.532399e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.163e0

QD
type: SiteQuality
SIO_000300: 1.163e1

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
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variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.824e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

MQRankSum
type: SiteQuality
SIO_000300: 2.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.736e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 3.88e0

DP
type: SiteQuality
SIO_000300: 1.53451e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

GenotypeQuality
all individuals: 1047
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4437
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.535936e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

FS
type: SiteQuality
SIO_000300: 1.1346e1

VQSLOD
type: SiteQuality
SIO_000300: -1.845e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.766e0

QD
type: SiteQuality
SIO_000300: 9.77e0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4433
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49905
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004807692307692e-5
allele num: 66560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.205e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

VQSLOD
type: SiteQuality
SIO_000300: -1.399e0

MQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.536324e6

QD
type: SiteQuality
SIO_000300: 5.91e0

GenotypeQuality
all individuals: 599
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502313562886846e-5
allele num: 66564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.536427e6

QD
type: SiteQuality
SIO_000300: 1.486e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 5.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

FS
type: SiteQuality
SIO_000300: 1.745e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4441
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502268425322237e-5
allele num: 66566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.84e1

MQRankSum
type: SiteQuality
SIO_000300: -7.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 6.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.415e0

VQSLOD
type: SiteQuality
SIO_000300: -3.229e0

FS
type: SiteQuality
SIO_000300: 3.359e0

DP
type: SiteQuality
SIO_000300: 1.536312e6

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 49890
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variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.536386e6

MQRankSum
type: SiteQuality
SIO_000300: 8.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.218e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.426e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

QD
type: SiteQuality
SIO_000300: 1.015e1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 8.75e1
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GenotypeQuality
all individuals: 49803
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 4420
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GenotypeQuality
all individuals: 2680
bin: 9.75e1
variant carriers: 189

GenotypeQuality
all individuals: 395
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.332004851845434e-4
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

African
type: Population
allele count: 184
allele frequency: 1.769571071359877e-2
allele num: 10398
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.63e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

DP
type: SiteQuality
SIO_000300: 1.544891e6

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1034
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 4441
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
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Other
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Latino
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allele frequency: 8.673026886383348e-5
allele num: 11530
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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FS
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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MQRankSum
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 900
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 6.012686769082765e-5
allele num: 66526
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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MQ
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ClippingRankSum
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FS
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.926411096127914e-4
allele num: 10382
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 896
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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QD
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.738223535546671e-4
allele num: 11506
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66442
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.68e-1

BaseQRankSum
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SIO_000300: -7.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 1.532055e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505072092953252e-5
allele num: 66442
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

DP
type: SiteQuality
SIO_000300: 1.532055e6

FS
type: SiteQuality
SIO_000300: 8.68e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.969e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16102
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
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allele num: 894
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African
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allele frequency: 9.654373431164318e-5
allele num: 10358
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East Asian
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allele frequency: 0.0e0
allele num: 8540
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
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allele num: 6572
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-2

VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
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QD
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 3.028651038827306e-5
allele num: 66036
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Other
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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BaseQRankSum
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DP
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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ReadPosRankSum
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DP
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QD
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MQRankSum
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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East Asian
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Other
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FS
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DP
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MQ
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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Other
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South Asian
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European (Finnish)
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European (Non-Finnish)
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MQ
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: 1.3e-3

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.35e-1

FS
type: SiteQuality
SIO_000300: 1.2306e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63778
num of homozygotes: 0

African
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allele count: 3
allele frequency: 3.044448954739192e-4
allele num: 9854
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 1.2306e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.372179e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.585037248375337e-5
allele num: 63090
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8058
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10878
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13804
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 2.648e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.549e0

ClippingRankSum
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SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 7.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

DP
type: SiteQuality
SIO_000300: 1.322431e6

MQ
type: SiteQuality
SIO_000300: 5.925e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.591343093570974e-5
allele num: 62840
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10830
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.031353135313531e-4
allele num: 9696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8016
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.294356e6

FS
type: SiteQuality
SIO_000300: 1.973e0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-1

QD
type: SiteQuality
SIO_000300: 1.187e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.109e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.03777501037775e-4
allele num: 9636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10782
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13616
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.25239e6

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

VQSLOD
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SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

FS
type: SiteQuality
SIO_000300: 3.245e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.179e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.668378576669112e-4
allele num: 13630
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 1.251539e6

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.31e-1

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.87155337598649e-5
allele num: 61582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13046
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7746
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

ClippingRankSum
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SIO_000300: 6.919999999999999e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 808
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6154
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.65305650147122e-5
allele num: 60494
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 12588
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e0

BaseQRankSum
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MQRankSum
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MQ
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QD
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InbreedingCoeff
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DP
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60208
num of homozygotes: 0

European (Finnish)
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allele count: 3
allele frequency: 4.884402474763921e-4
allele num: 6142
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 808
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7518
num of homozygotes: 0

Latino
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 7180
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.711449597809344e-5
allele num: 58430
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Other
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6038
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.096605e6

MQRankSum
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ClippingRankSum
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MQ
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QD
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.007066606525334e-5
allele num: 66510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.619e1

MQRankSum
type: SiteQuality
SIO_000300: 9.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.641664e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.835e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

GenotypeQuality
all individuals: 377
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7736
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.927525057825752e-4
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.067e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.89e-1

DP
type: SiteQuality
SIO_000300: 1.643708e6

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.83e0

QD
type: SiteQuality
SIO_000300: 1.392e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.224e1

VQSLOD
type: SiteQuality
SIO_000300: -1.419e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.848e1

MQRankSum
type: SiteQuality
SIO_000300: -6.02e-1

DP
type: SiteQuality
SIO_000300: 1.646549e6

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.944e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e0

DP
type: SiteQuality
SIO_000300: 1.655192e6

VQSLOD
type: SiteQuality
SIO_000300: -1.153e0

FS
type: SiteQuality
SIO_000300: 3.062e0

QD
type: SiteQuality
SIO_000300: 1.559e1

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42785
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.660019e6

FS
type: SiteQuality
SIO_000300: 4.755e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.619e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.15e0

VQSLOD
type: SiteQuality
SIO_000300: 9.47e-1

GenotypeQuality
all individuals: 2234
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 1370
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7824
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.660769e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 6.923e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 1.544e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.363e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

VQSLOD
type: SiteQuality
SIO_000300: -1.103e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

DP
type: SiteQuality
SIO_000300: 1.664651e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.06e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.054e1

DP
type: SiteQuality
SIO_000300: 1.666918e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.371e0

MQRankSum
type: SiteQuality
SIO_000300: -5.75e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.498560460652591e-5
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2229
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.77e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.24e-1

QD
type: SiteQuality
SIO_000300: 5.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: -2.778e0

DP
type: SiteQuality
SIO_000300: 1.669531e6

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43561
bin: 6.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

DP
type: SiteQuality
SIO_000300: 1.670088e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

QD
type: SiteQuality
SIO_000300: 1.34e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.54e-1

FS
type: SiteQuality
SIO_000300: 1.894e0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.465e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.04e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.371e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.23e-2

QD
type: SiteQuality
SIO_000300: 1.198e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.66997e6

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 1.0261e1

VQSLOD
type: SiteQuality
SIO_000300: -1.389e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.52e0

QD
type: SiteQuality
SIO_000300: 1.188e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.33e-2

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

FS
type: SiteQuality
SIO_000300: 2.53e0

DP
type: SiteQuality
SIO_000300: 1.669792e6

GenotypeQuality
all individuals: 2211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
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Latino
type: Population
allele count: 4
allele frequency: 3.456619426201175e-4
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.670083e6

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

VQSLOD
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SIO_000300: 1.58e0

QD
type: SiteQuality
SIO_000300: 1.164e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.92e-2